Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 SNORD114-6-201ENST00000364393 72 ntBASIC2□□□□□ -2.09
YIPF1Q9Y548 RNU6-1164P-201ENST00000364428 107 ntBASIC2□□□□□ -2.09
YIPF1Q9Y548 MIR628-201ENST00000385229 95 ntBASIC2□□□□□ -2.09
YIPF1Q9Y548 Y_RNA.595-201ENST00000410403 105 ntBASIC2□□□□□ -2.09
YIPF1Q9Y548 AC005534.2-201ENST00000431047 433 ntBASIC2□□□□□ -2.09
YIPF1Q9Y548 MTCYBP6-201ENST00000441810 138 ntBASIC2□□□□□ -2.09
YIPF1Q9Y548 AC016717.1-201ENST00000448918 286 ntBASIC2□□□□□ -2.09
YIPF1Q9Y548 AC007395.1-201ENST00000451333 677 ntBASIC2□□□□□ -2.09
YIPF1Q9Y548 HMGN2P9-201ENST00000476875 229 ntBASIC2□□□□□ -2.09
YIPF1Q9Y548 AL163540.1-201ENST00000485382 386 ntBASIC2□□□□□ -2.09
YIPF1Q9Y548 RN7SKP49-201ENST00000516675 260 ntBASIC2□□□□□ -2.09
YIPF1Q9Y548 RNA5SP137-201ENST00000516833 135 ntBASIC2□□□□□ -2.09
YIPF1Q9Y548 AC091144.1-201ENST00000519573 138 ntBASIC2□□□□□ -2.09
YIPF1Q9Y548 AL442163.3-201ENST00000554110 156 ntBASIC2□□□□□ -2.09
YIPF1Q9Y548 HSBP1P1-201ENST00000555205 166 ntBASIC2□□□□□ -2.09
YIPF1Q9Y548 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2□□□□□ -2.09
YIPF1Q9Y548 AC002984.1-201ENST00000591692 448 ntBASIC2□□□□□ -2.09
YIPF1Q9Y548 AC083806.3-201ENST00000614016 455 ntBASIC2□□□□□ -2.09
YIPF1Q9Y548 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
YIPF1Q9Y548 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
YIPF1Q9Y548 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
YIPF1Q9Y548 Y_RNA.99-201ENST00000363138 105 ntBASIC1.99□□□□□ -2.09
YIPF1Q9Y548 Y_RNA.148-201ENST00000363557 117 ntBASIC1.99□□□□□ -2.09
YIPF1Q9Y548 SNORA22B-201ENST00000383876 138 ntBASIC1.99□□□□□ -2.09
YIPF1Q9Y548 RNU6-926P-201ENST00000384075 107 ntBASIC1.99□□□□□ -2.09
YIPF1Q9Y548 SNORD14D-201ENST00000384390 87 ntBASIC1.99□□□□□ -2.09
YIPF1Q9Y548 MIR586-201ENST00000385035 97 ntBASIC1.99□□□□□ -2.09
YIPF1Q9Y548 MIR548B-201ENST00000385247 97 ntBASIC1.99□□□□□ -2.09
YIPF1Q9Y548 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
YIPF1Q9Y548 SNORD12B-201ENST00000410433 91 ntBASIC1.99□□□□□ -2.09
YIPF1Q9Y548 RNA5SP270-201ENST00000411361 118 ntBASIC1.99□□□□□ -2.09
YIPF1Q9Y548 AC139712.2-201ENST00000424302 339 ntBASIC1.99□□□□□ -2.09
YIPF1Q9Y548 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.99□□□□□ -2.09
YIPF1Q9Y548 MTCO1P44-201ENST00000441935 243 ntBASIC1.99□□□□□ -2.09
YIPF1Q9Y548 AC010531.2-201ENST00000465012 153 ntBASIC1.99□□□□□ -2.09
YIPF1Q9Y548 RNU7-193P-201ENST00000516723 65 ntBASIC1.99□□□□□ -2.09
YIPF1Q9Y548 Y_RNA.711-201ENST00000516993 102 ntBASIC1.99□□□□□ -2.09
YIPF1Q9Y548 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.99□□□□□ -2.09
YIPF1Q9Y548 AL078596.1-201ENST00000624856 447 ntBASIC1.99□□□□□ -2.09
YIPF1Q9Y548 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
YIPF1Q9Y548 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
YIPF1Q9Y548 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
YIPF1Q9Y548 LINC02555-201ENST00000563933 1951 ntBASIC1.98□□□□□ -2.09
YIPF1Q9Y548 RNU1-17P-201ENST00000363022 152 ntBASIC1.98□□□□□ -2.09
YIPF1Q9Y548 RNU6-1227P-201ENST00000383981 107 ntBASIC1.98□□□□□ -2.09
YIPF1Q9Y548 MIR9-3-201ENST00000385084 90 ntBASIC1.98□□□□□ -2.09
YIPF1Q9Y548 AC245102.2-201ENST00000448956 180 ntBASIC1.98□□□□□ -2.09
YIPF1Q9Y548 PCNPP5-201ENST00000452246 481 ntBASIC1.98□□□□□ -2.09
YIPF1Q9Y548 RNU7-57P-201ENST00000459540 60 ntBASIC1.98□□□□□ -2.09
YIPF1Q9Y548 AC010469.2-201ENST00000496412 480 ntBASIC1.98□□□□□ -2.09
YIPF1Q9Y548 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.98□□□□□ -2.09
YIPF1Q9Y548 SNORA25.10-201ENST00000515926 124 ntBASIC1.98□□□□□ -2.09
YIPF1Q9Y548 RNA5SP458-201ENST00000516188 119 ntBASIC1.98□□□□□ -2.09
YIPF1Q9Y548 RNU6-911P-201ENST00000516523 104 ntBASIC1.98□□□□□ -2.09
YIPF1Q9Y548 RNU6-988P-201ENST00000519081 107 ntBASIC1.98□□□□□ -2.09
YIPF1Q9Y548 AC087441.2-201ENST00000529141 262 ntBASIC1.98□□□□□ -2.09
YIPF1Q9Y548 AL356055.1-201ENST00000602528 446 ntBASIC1.98□□□□□ -2.09
YIPF1Q9Y548 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.98□□□□□ -2.09
YIPF1Q9Y548 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.98□□□□□ -2.09
YIPF1Q9Y548 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.98□□□□□ -2.09
YIPF1Q9Y548 AC008873.1-201ENST00000625051 138 ntBASIC1.98□□□□□ -2.09
YIPF1Q9Y548 RNU6-975P-201ENST00000384296 105 ntBASIC1.97□□□□□ -2.09
YIPF1Q9Y548 HMGN2P39-201ENST00000398005 273 ntBASIC1.97□□□□□ -2.09
YIPF1Q9Y548 MIR1302-11-201ENST00000408051 138 ntBASIC1.97□□□□□ -2.09
YIPF1Q9Y548 MIR1302-9-201ENST00000408365 138 ntBASIC1.97□□□□□ -2.09
YIPF1Q9Y548 MIR1302-10-201ENST00000408734 138 ntBASIC1.97□□□□□ -2.09
YIPF1Q9Y548 MTCO3P19-201ENST00000415864 321 ntBASIC1.97□□□□□ -2.09
YIPF1Q9Y548 BX510359.4-201ENST00000423750 193 ntBASIC1.97□□□□□ -2.09
YIPF1Q9Y548 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.97□□□□□ -2.09
YIPF1Q9Y548 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.97□□□□□ -2.09
YIPF1Q9Y548 RNU6-107P-201ENST00000516643 102 ntBASIC1.97□□□□□ -2.09
YIPF1Q9Y548 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
YIPF1Q9Y548 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.97□□□□□ -2.09
YIPF1Q9Y548 AC023442.1-201ENST00000531247 422 ntBASIC1.97□□□□□ -2.09
YIPF1Q9Y548 MIR1302-2-201ENST00000607096 138 ntBASIC1.97□□□□□ -2.09
YIPF1Q9Y548 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.97□□□□□ -2.09
YIPF1Q9Y548 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.97□□□□□ -2.09
YIPF1Q9Y548 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.97□□□□□ -2.09
YIPF1Q9Y548 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.96□□□□□ -2.1
YIPF1Q9Y548 AC005592.1-201ENST00000566527 1640 ntBASIC1.96□□□□□ -2.1
YIPF1Q9Y548 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.96□□□□□ -2.1
YIPF1Q9Y548 RNY3P4-201ENST00000384428 101 ntBASIC1.96□□□□□ -2.1
YIPF1Q9Y548 MIR518A2-201ENST00000384966 87 ntBASIC1.96□□□□□ -2.1
YIPF1Q9Y548 ELOCP21-201ENST00000412558 336 ntBASIC1.96□□□□□ -2.1
YIPF1Q9Y548 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.96□□□□□ -2.1
YIPF1Q9Y548 UQCRBP2-201ENST00000447827 297 ntBASIC1.96□□□□□ -2.1
YIPF1Q9Y548 RNU6-717P-201ENST00000459076 104 ntBASIC1.96□□□□□ -2.1
YIPF1Q9Y548 SNORA40.9-201ENST00000515895 93 ntBASIC1.96□□□□□ -2.1
YIPF1Q9Y548 RNU6-948P-201ENST00000516374 107 ntBASIC1.96□□□□□ -2.1
YIPF1Q9Y548 SNORA40.14-201ENST00000516543 86 ntBASIC1.96□□□□□ -2.1
YIPF1Q9Y548 CYCSP23-201ENST00000519781 313 ntBASIC1.96□□□□□ -2.1
YIPF1Q9Y548 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.96□□□□□ -2.1
YIPF1Q9Y548 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.96□□□□□ -2.1
YIPF1Q9Y548 AC011476.5-201ENST00000615594 130 ntBASIC1.96□□□□□ -2.1
YIPF1Q9Y548 AL590240.4-201ENST00000616908 390 ntBASIC1.96□□□□□ -2.1
YIPF1Q9Y548 AC084768.2-201ENST00000622736 221 ntBASIC1.96□□□□□ -2.1
YIPF1Q9Y548 AC130454.1-201ENST00000622948 401 ntBASIC1.96□□□□□ -2.1
YIPF1Q9Y548 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.96□□□□□ -2.1
YIPF1Q9Y548 MTND4P1-201ENST00000457501 1466 ntBASIC1.95□□□□□ -2.1
YIPF1Q9Y548 Y_RNA.27-201ENST00000362540 103 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms