Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 RNU6-438P-201ENST00000365561 103 ntBASIC5.02□□□□□ -1.61
TRIM35Q9UPQ4 MIR147B-201ENST00000390185 80 ntBASIC5.02□□□□□ -1.61
TRIM35Q9UPQ4 SNORA3.3-201ENST00000408712 125 ntBASIC5.02□□□□□ -1.61
TRIM35Q9UPQ4 SNORA7.5-201ENST00000410672 110 ntBASIC5.02□□□□□ -1.61
TRIM35Q9UPQ4 RN7SKP27-201ENST00000410684 333 ntBASIC5.02□□□□□ -1.61
TRIM35Q9UPQ4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM35Q9UPQ4 AC084357.1-201ENST00000473404 255 ntBASIC5.02□□□□□ -1.61
TRIM35Q9UPQ4 RNA5SP208-201ENST00000516156 78 ntBASIC5.02□□□□□ -1.61
TRIM35Q9UPQ4 CYCSP30-201ENST00000546447 172 ntBASIC5.02□□□□□ -1.61
TRIM35Q9UPQ4 AC034105.4-201ENST00000568304 277 ntBASIC5.02□□□□□ -1.61
TRIM35Q9UPQ4 ELOCP29-201ENST00000588193 334 ntBASIC5.02□□□□□ -1.61
TRIM35Q9UPQ4 AC073308.1-201ENST00000623696 305 ntBASIC5.02□□□□□ -1.61
TRIM35Q9UPQ4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM35Q9UPQ4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM35Q9UPQ4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM35Q9UPQ4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM35Q9UPQ4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM35Q9UPQ4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM35Q9UPQ4 FAM35DP-201ENST00000323387 2712 ntBASIC5.02□□□□□ -1.61
TRIM35Q9UPQ4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM35Q9UPQ4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM35Q9UPQ4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM35Q9UPQ4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM35Q9UPQ4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM35Q9UPQ4 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM35Q9UPQ4 RNA5SP124-201ENST00000362739 110 ntBASIC5.01□□□□□ -1.61
TRIM35Q9UPQ4 Y_RNA.440-201ENST00000384120 114 ntBASIC5.01□□□□□ -1.61
TRIM35Q9UPQ4 RPS26P15-201ENST00000488067 348 ntBASIC5.01□□□□□ -1.61
TRIM35Q9UPQ4 RPL23AP63-201ENST00000498752 471 ntBASIC5.01□□□□□ -1.61
TRIM35Q9UPQ4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM35Q9UPQ4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM35Q9UPQ4 SNORA62.6-201ENST00000606322 83 ntBASIC5.01□□□□□ -1.61
TRIM35Q9UPQ4 DLEU2_5.2-201ENST00000610606 84 ntBASIC5.01□□□□□ -1.61
TRIM35Q9UPQ4 AL591424.2-201ENST00000617023 128 ntBASIC5.01□□□□□ -1.61
TRIM35Q9UPQ4 AC095038.3-201ENST00000634439 195 ntBASIC5.01□□□□□ -1.61
TRIM35Q9UPQ4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
TRIM35Q9UPQ4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM35Q9UPQ4 AC010733.2-201ENST00000589496 5702 ntBASIC5.01□□□□□ -1.61
TRIM35Q9UPQ4 IPO8P1-201ENST00000455509 3109 ntBASIC5.01□□□□□ -1.61
TRIM35Q9UPQ4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC5□□□□□ -1.61
TRIM35Q9UPQ4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM35Q9UPQ4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
TRIM35Q9UPQ4 Y_RNA.37-201ENST00000362606 108 ntBASIC5□□□□□ -1.61
TRIM35Q9UPQ4 SNORD115-28-201ENST00000363931 81 ntBASIC5□□□□□ -1.61
TRIM35Q9UPQ4 RNA5SP97-201ENST00000365006 84 ntBASIC5□□□□□ -1.61
TRIM35Q9UPQ4 RNU7-80P-201ENST00000459562 61 ntBASIC5□□□□□ -1.61
TRIM35Q9UPQ4 AC125388.1-201ENST00000459631 156 ntBASIC5□□□□□ -1.61
TRIM35Q9UPQ4 RN7SL542P-201ENST00000467147 294 ntBASIC5□□□□□ -1.61
TRIM35Q9UPQ4 RNU6-539P-201ENST00000516665 103 ntBASIC5□□□□□ -1.61
TRIM35Q9UPQ4 AC022695.1-201ENST00000522089 237 ntBASIC5□□□□□ -1.61
TRIM35Q9UPQ4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC5□□□□□ -1.61
TRIM35Q9UPQ4 AC096720.1-201ENST00000604441 183 ntBASIC5□□□□□ -1.61
TRIM35Q9UPQ4 AC013412.1-201ENST00000610687 192 ntBASIC5□□□□□ -1.61
TRIM35Q9UPQ4 AL121772.2-201ENST00000614331 297 ntBASIC5□□□□□ -1.61
TRIM35Q9UPQ4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRIM35Q9UPQ4 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
TRIM35Q9UPQ4 ZNF271P-202ENST00000465539 1970 ntBASIC5□□□□□ -1.61
TRIM35Q9UPQ4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
TRIM35Q9UPQ4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRIM35Q9UPQ4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM35Q9UPQ4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM35Q9UPQ4 RNU6-743P-201ENST00000364151 106 ntBASIC4.99□□□□□ -1.61
TRIM35Q9UPQ4 RNU4-16P-201ENST00000364737 141 ntBASIC4.99□□□□□ -1.61
TRIM35Q9UPQ4 Y_RNA.351-201ENST00000365436 96 ntBASIC4.99□□□□□ -1.61
TRIM35Q9UPQ4 MIR124-3-201ENST00000384866 87 ntBASIC4.99□□□□□ -1.61
TRIM35Q9UPQ4 AC023141.4-201ENST00000412031 328 ntBASIC4.99□□□□□ -1.61
TRIM35Q9UPQ4 AL133162.1-201ENST00000463228 453 ntBASIC4.99□□□□□ -1.61
TRIM35Q9UPQ4 MIR449C-201ENST00000516047 92 ntBASIC4.99□□□□□ -1.61
TRIM35Q9UPQ4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM35Q9UPQ4 HSPE1P19-201ENST00000603327 295 ntBASIC4.99□□□□□ -1.61
TRIM35Q9UPQ4 AC091932.4-201ENST00000623386 200 ntBASIC4.99□□□□□ -1.61
TRIM35Q9UPQ4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM35Q9UPQ4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
TRIM35Q9UPQ4 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.98□□□□□ -1.61
TRIM35Q9UPQ4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
TRIM35Q9UPQ4 RNA5SP39-201ENST00000411245 120 ntBASIC4.98□□□□□ -1.61
TRIM35Q9UPQ4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.98□□□□□ -1.61
TRIM35Q9UPQ4 AP001486.1-201ENST00000463339 476 ntBASIC4.98□□□□□ -1.61
TRIM35Q9UPQ4 AC112771.1-201ENST00000463581 102 ntBASIC4.98□□□□□ -1.61
TRIM35Q9UPQ4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC4.98□□□□□ -1.61
TRIM35Q9UPQ4 SNORD36C-201ENST00000516733 66 ntBASIC4.98□□□□□ -1.61
TRIM35Q9UPQ4 Y_RNA.714-201ENST00000517065 90 ntBASIC4.98□□□□□ -1.61
TRIM35Q9UPQ4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
TRIM35Q9UPQ4 AC244505.7-201ENST00000599675 272 ntBASIC4.98□□□□□ -1.61
TRIM35Q9UPQ4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM35Q9UPQ4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM35Q9UPQ4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM35Q9UPQ4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM35Q9UPQ4 MAPK10-372ENST00000641954 3413 ntBASIC4.97□□□□□ -1.61
TRIM35Q9UPQ4 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM35Q9UPQ4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.97□□□□□ -1.61
TRIM35Q9UPQ4 SNORA7.2-201ENST00000364446 145 ntBASIC4.97□□□□□ -1.61
TRIM35Q9UPQ4 SNORD31B-201ENST00000364977 69 ntBASIC4.97□□□□□ -1.61
TRIM35Q9UPQ4 AC025445.1-201ENST00000502728 300 ntBASIC4.97□□□□□ -1.61
TRIM35Q9UPQ4 AC004812.1-201ENST00000540773 146 ntBASIC4.97□□□□□ -1.61
TRIM35Q9UPQ4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.97□□□□□ -1.61
TRIM35Q9UPQ4 AL137849.1-201ENST00000604767 169 ntBASIC4.97□□□□□ -1.61
TRIM35Q9UPQ4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.97□□□□□ -1.61
TRIM35Q9UPQ4 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM35Q9UPQ4 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 212.7 ms