Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MIR548I2-201ENST00000408348 149 ntBASIC4.76□□□□□ -1.65
RTN4Q9NQC3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.76□□□□□ -1.65
RTN4Q9NQC3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.76□□□□□ -1.65
RTN4Q9NQC3 SNORA25.12-201ENST00000516202 82 ntBASIC4.76□□□□□ -1.65
RTN4Q9NQC3 RNU6-504P-201ENST00000516568 104 ntBASIC4.76□□□□□ -1.65
RTN4Q9NQC3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RTN4Q9NQC3 AC079587.1-201ENST00000603846 277 ntBASIC4.76□□□□□ -1.65
RTN4Q9NQC3 SNORA28-201ENST00000606769 126 ntBASIC4.76□□□□□ -1.65
RTN4Q9NQC3 AC244205.2-202ENST00000635781 342 ntBASIC4.76□□□□□ -1.65
RTN4Q9NQC3 MIR3658-201ENST00000636291 56 ntBASIC4.76□□□□□ -1.65
RTN4Q9NQC3 SNORA1B-201ENST00000362535 133 ntBASIC4.75□□□□□ -1.65
RTN4Q9NQC3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RTN4Q9NQC3 RNU11-3P-201ENST00000391111 133 ntBASIC4.75□□□□□ -1.65
RTN4Q9NQC3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC4.75□□□□□ -1.65
RTN4Q9NQC3 AC245047.3-201ENST00000429428 127 ntBASIC4.75□□□□□ -1.65
RTN4Q9NQC3 AC099677.2-201ENST00000436385 175 ntBASIC4.75□□□□□ -1.65
RTN4Q9NQC3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.75□□□□□ -1.65
RTN4Q9NQC3 RPL35AP15-201ENST00000468042 339 ntBASIC4.75□□□□□ -1.65
RTN4Q9NQC3 IGKV1-32-201ENST00000519290 311 ntBASIC4.75□□□□□ -1.65
RTN4Q9NQC3 MIR3934-201ENST00000579806 107 ntBASIC4.75□□□□□ -1.65
RTN4Q9NQC3 RN7SL690P-201ENST00000582087 240 ntBASIC4.75□□□□□ -1.65
RTN4Q9NQC3 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
RTN4Q9NQC3 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.74□□□□□ -1.65
RTN4Q9NQC3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RTN4Q9NQC3 SNORA33-201ENST00000363664 130 ntBASIC4.74□□□□□ -1.65
RTN4Q9NQC3 SNORD113.2-201ENST00000364166 89 ntBASIC4.74□□□□□ -1.65
RTN4Q9NQC3 SNORA70F-201ENST00000384142 135 ntBASIC4.74□□□□□ -1.65
RTN4Q9NQC3 RNA5SP87-201ENST00000384155 118 ntBASIC4.74□□□□□ -1.65
RTN4Q9NQC3 MIR298-201ENST00000401212 88 ntBASIC4.74□□□□□ -1.65
RTN4Q9NQC3 MIR937-201ENST00000401271 86 ntBASIC4.74□□□□□ -1.65
RTN4Q9NQC3 FTH1P12-201ENST00000432137 551 ntBASIC4.74□□□□□ -1.65
RTN4Q9NQC3 AC006023.1-201ENST00000603944 259 ntBASIC4.74□□□□□ -1.65
RTN4Q9NQC3 TUG1_4.1-201ENST00000619464 181 ntBASIC4.74□□□□□ -1.65
RTN4Q9NQC3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RTN4Q9NQC3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RTN4Q9NQC3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
RTN4Q9NQC3 MIR539-201ENST00000365690 78 ntBASIC4.73□□□□□ -1.65
RTN4Q9NQC3 RN7SKP156-201ENST00000410308 342 ntBASIC4.73□□□□□ -1.65
RTN4Q9NQC3 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.73□□□□□ -1.65
RTN4Q9NQC3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC4.73□□□□□ -1.65
RTN4Q9NQC3 RNU6-62P-201ENST00000516526 102 ntBASIC4.73□□□□□ -1.65
RTN4Q9NQC3 YPEL5P2-201ENST00000605553 359 ntBASIC4.73□□□□□ -1.65
RTN4Q9NQC3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.73□□□□□ -1.65
RTN4Q9NQC3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
RTN4Q9NQC3 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RTN4Q9NQC3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RTN4Q9NQC3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RTN4Q9NQC3 BX510359.4-201ENST00000423750 193 ntBASIC4.72□□□□□ -1.65
RTN4Q9NQC3 AC231760.1-201ENST00000498002 260 ntBASIC4.72□□□□□ -1.65
RTN4Q9NQC3 AC006064.5-201ENST00000541782 248 ntBASIC4.72□□□□□ -1.65
RTN4Q9NQC3 MIR4436B2-201ENST00000581415 91 ntBASIC4.72□□□□□ -1.65
RTN4Q9NQC3 MIR4436B1-201ENST00000583272 91 ntBASIC4.72□□□□□ -1.65
RTN4Q9NQC3 AL591926.4-201ENST00000616895 298 ntBASIC4.72□□□□□ -1.65
RTN4Q9NQC3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RTN4Q9NQC3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.72□□□□□ -1.65
RTN4Q9NQC3 ANKRD18EP-201ENST00000405487 2632 ntBASIC4.71□□□□□ -1.66
RTN4Q9NQC3 Y_RNA.265-201ENST00000364677 108 ntBASIC4.71□□□□□ -1.66
RTN4Q9NQC3 RNU6-818P-201ENST00000364837 108 ntBASIC4.71□□□□□ -1.66
RTN4Q9NQC3 RNA5SP332-201ENST00000391063 115 ntBASIC4.71□□□□□ -1.66
RTN4Q9NQC3 Y_RNA.586-201ENST00000391146 98 ntBASIC4.71□□□□□ -1.66
RTN4Q9NQC3 RNA5SP270-201ENST00000411361 118 ntBASIC4.71□□□□□ -1.66
RTN4Q9NQC3 AC083863.1-201ENST00000438811 231 ntBASIC4.71□□□□□ -1.66
RTN4Q9NQC3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.71□□□□□ -1.66
RTN4Q9NQC3 MIR4658-201ENST00000584344 65 ntBASIC4.71□□□□□ -1.66
RTN4Q9NQC3 AC008507.4-201ENST00000585464 127 ntBASIC4.71□□□□□ -1.66
RTN4Q9NQC3 RNVU1-4-201ENST00000612985 164 ntBASIC4.71□□□□□ -1.66
RTN4Q9NQC3 AC022202.1-201ENST00000613515 211 ntBASIC4.71□□□□□ -1.66
RTN4Q9NQC3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
RTN4Q9NQC3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RTN4Q9NQC3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.7□□□□□ -1.66
RTN4Q9NQC3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.7□□□□□ -1.66
RTN4Q9NQC3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.7□□□□□ -1.66
RTN4Q9NQC3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RTN4Q9NQC3 RNU6-978P-201ENST00000364371 103 ntBASIC4.7□□□□□ -1.66
RTN4Q9NQC3 MIR518A2-201ENST00000384966 87 ntBASIC4.7□□□□□ -1.66
RTN4Q9NQC3 TRBV12-1-201ENST00000479785 344 ntBASIC4.7□□□□□ -1.66
RTN4Q9NQC3 MIR4762-201ENST00000585261 75 ntBASIC4.7□□□□□ -1.66
RTN4Q9NQC3 AC120024.3-201ENST00000603167 156 ntBASIC4.7□□□□□ -1.66
RTN4Q9NQC3 RMST_8.1-201ENST00000610287 165 ntBASIC4.7□□□□□ -1.66
RTN4Q9NQC3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RTN4Q9NQC3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.7□□□□□ -1.66
RTN4Q9NQC3 AL356274.2-201ENST00000624379 3752 ntBASIC4.7□□□□□ -1.66
RTN4Q9NQC3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RTN4Q9NQC3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RTN4Q9NQC3 MFSD8-233ENST00000641482 4860 ntBASIC4.69□□□□□ -1.66
RTN4Q9NQC3 RNA5SP175-201ENST00000364275 119 ntBASIC4.69□□□□□ -1.66
RTN4Q9NQC3 U8.5-201ENST00000364528 136 ntBASIC4.69□□□□□ -1.66
RTN4Q9NQC3 RPS29P31-201ENST00000446147 164 ntBASIC4.69□□□□□ -1.66
RTN4Q9NQC3 NDUFA4P2-201ENST00000489989 244 ntBASIC4.69□□□□□ -1.66
RTN4Q9NQC3 AC091544.4-201ENST00000555268 342 ntBASIC4.69□□□□□ -1.66
RTN4Q9NQC3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RTN4Q9NQC3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RTN4Q9NQC3 ZNF702P-202ENST00000434269 1966 ntBASIC4.68□□□□□ -1.66
RTN4Q9NQC3 RNU1-51P-201ENST00000365345 176 ntBASIC4.68□□□□□ -1.66
RTN4Q9NQC3 MLLT10P1-201ENST00000418346 262 ntBASIC4.68□□□□□ -1.66
RTN4Q9NQC3 AL590762.4-201ENST00000425885 253 ntBASIC4.68□□□□□ -1.66
RTN4Q9NQC3 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.68□□□□□ -1.66
RTN4Q9NQC3 MIR4330-201ENST00000579077 105 ntBASIC4.68□□□□□ -1.66
RTN4Q9NQC3 U1.36-201ENST00000620684 176 ntBASIC4.68□□□□□ -1.66
RTN4Q9NQC3 AP001340.1-201ENST00000624405 217 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 156.1 ms