Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 SNORD32B-201ENST00000364460 84 ntBASIC2.84□□□□□ -1.95
SEC61A2Q9H9S3 RNU6-643P-201ENST00000384018 107 ntBASIC2.84□□□□□ -1.95
SEC61A2Q9H9S3 RNU6-376P-201ENST00000384731 106 ntBASIC2.84□□□□□ -1.95
SEC61A2Q9H9S3 MIR586-201ENST00000385035 97 ntBASIC2.84□□□□□ -1.95
SEC61A2Q9H9S3 MIR767-201ENST00000390228 109 ntBASIC2.84□□□□□ -1.95
SEC61A2Q9H9S3 RNU6-460P-201ENST00000391158 108 ntBASIC2.84□□□□□ -1.95
SEC61A2Q9H9S3 AL355796.1-201ENST00000406706 323 ntBASIC2.84□□□□□ -1.95
SEC61A2Q9H9S3 RNA5SP229-201ENST00000410809 99 ntBASIC2.84□□□□□ -1.95
SEC61A2Q9H9S3 RNU7-14P-201ENST00000459331 62 ntBASIC2.84□□□□□ -1.95
SEC61A2Q9H9S3 RN7SL504P-201ENST00000494496 287 ntBASIC2.84□□□□□ -1.95
SEC61A2Q9H9S3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.84□□□□□ -1.95
SEC61A2Q9H9S3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.84□□□□□ -1.95
SEC61A2Q9H9S3 AL031274.2-201ENST00000599419 203 ntBASIC2.84□□□□□ -1.95
SEC61A2Q9H9S3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.84□□□□□ -1.95
SEC61A2Q9H9S3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.84□□□□□ -1.95
SEC61A2Q9H9S3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
SEC61A2Q9H9S3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.84□□□□□ -1.96
SEC61A2Q9H9S3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
SEC61A2Q9H9S3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
SEC61A2Q9H9S3 SNORD116-13-201ENST00000384408 92 ntBASIC2.83□□□□□ -1.96
SEC61A2Q9H9S3 Y_RNA.521-201ENST00000384560 114 ntBASIC2.83□□□□□ -1.96
SEC61A2Q9H9S3 MIR518C-201ENST00000384822 101 ntBASIC2.83□□□□□ -1.96
SEC61A2Q9H9S3 SNORA11.1-201ENST00000408133 129 ntBASIC2.83□□□□□ -1.96
SEC61A2Q9H9S3 SNORA36B-201ENST00000410438 131 ntBASIC2.83□□□□□ -1.96
SEC61A2Q9H9S3 AL121890.1-201ENST00000435457 205 ntBASIC2.83□□□□□ -1.96
SEC61A2Q9H9S3 AC074290.1-201ENST00000448883 135 ntBASIC2.83□□□□□ -1.96
SEC61A2Q9H9S3 RNU7-57P-201ENST00000459540 60 ntBASIC2.83□□□□□ -1.96
SEC61A2Q9H9S3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.83□□□□□ -1.96
SEC61A2Q9H9S3 RNU6-1337P-201ENST00000516525 95 ntBASIC2.83□□□□□ -1.96
SEC61A2Q9H9S3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.83□□□□□ -1.96
SEC61A2Q9H9S3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.83□□□□□ -1.96
SEC61A2Q9H9S3 MIR5680-201ENST00000577577 84 ntBASIC2.83□□□□□ -1.96
SEC61A2Q9H9S3 LARP7P3-201ENST00000579888 337 ntBASIC2.83□□□□□ -1.96
SEC61A2Q9H9S3 MIR4765-201ENST00000585007 77 ntBASIC2.83□□□□□ -1.96
SEC61A2Q9H9S3 AL391903.3-201ENST00000612158 163 ntBASIC2.83□□□□□ -1.96
SEC61A2Q9H9S3 MIR548AY-201ENST00000617669 107 ntBASIC2.83□□□□□ -1.96
SEC61A2Q9H9S3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
SEC61A2Q9H9S3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.83□□□□□ -1.96
SEC61A2Q9H9S3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SEC61A2Q9H9S3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SEC61A2Q9H9S3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.82□□□□□ -1.96
SEC61A2Q9H9S3 Y_RNA.353-201ENST00000365440 108 ntBASIC2.82□□□□□ -1.96
SEC61A2Q9H9S3 SNORA20B-201ENST00000384220 132 ntBASIC2.82□□□□□ -1.96
SEC61A2Q9H9S3 RNU6-768P-201ENST00000384683 107 ntBASIC2.82□□□□□ -1.96
SEC61A2Q9H9S3 Y_RNA.622-201ENST00000411091 108 ntBASIC2.82□□□□□ -1.96
SEC61A2Q9H9S3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.82□□□□□ -1.96
SEC61A2Q9H9S3 RNU1-143P-201ENST00000516296 146 ntBASIC2.82□□□□□ -1.96
SEC61A2Q9H9S3 RNU7-115P-201ENST00000516433 55 ntBASIC2.82□□□□□ -1.96
SEC61A2Q9H9S3 MIR3200-201ENST00000580767 85 ntBASIC2.82□□□□□ -1.96
SEC61A2Q9H9S3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.82□□□□□ -1.96
SEC61A2Q9H9S3 U1.23-201ENST00000610293 146 ntBASIC2.82□□□□□ -1.96
SEC61A2Q9H9S3 AC011603.4-201ENST00000611325 277 ntBASIC2.82□□□□□ -1.96
SEC61A2Q9H9S3 uc_338.25-201ENST00000613756 156 ntBASIC2.82□□□□□ -1.96
SEC61A2Q9H9S3 RNU1-68P-201ENST00000615382 146 ntBASIC2.82□□□□□ -1.96
SEC61A2Q9H9S3 U1.39-201ENST00000621562 146 ntBASIC2.82□□□□□ -1.96
SEC61A2Q9H9S3 MIR6844-201ENST00000637122 62 ntBASIC2.82□□□□□ -1.96
SEC61A2Q9H9S3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SEC61A2Q9H9S3 AC093831.2-201ENST00000624393 3427 ntBASIC2.82□□□□□ -1.96
SEC61A2Q9H9S3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.82□□□□□ -1.96
SEC61A2Q9H9S3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SEC61A2Q9H9S3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.82□□□□□ -1.96
SEC61A2Q9H9S3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.82□□□□□ -1.96
SEC61A2Q9H9S3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SEC61A2Q9H9S3 AC110774.1-201ENST00000623567 2018 ntBASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 AC073346.2-201ENST00000624724 2058 ntBASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 AC002546.1-201ENST00000588041 2504 ntBASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 RNA5SP374-201ENST00000362939 125 ntBASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 RNY1P11-201ENST00000363759 113 ntBASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 RNU6-728P-201ENST00000365375 104 ntBASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 RNU6-144P-201ENST00000383951 107 ntBASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 RNU6-44P-201ENST00000384045 107 ntBASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 RNU6-1228P-201ENST00000391014 107 ntBASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 MIR1283-1-201ENST00000408494 87 ntBASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 RNU6-588P-201ENST00000410281 105 ntBASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 AC009414.1-201ENST00000427200 443 ntBASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 AC016717.1-201ENST00000448918 286 ntBASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 RPL23AP7-203ENST00000449021 469 ntBASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 AC006445.1-201ENST00000491925 405 ntBASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 SNORA31.1-201ENST00000515993 133 ntBASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 SNORA31.5-201ENST00000516190 133 ntBASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 RNU6-63P-201ENST00000516690 95 ntBASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 SCARNA20.6-201ENST00000517251 106 ntBASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 MIR2682-201ENST00000580305 110 ntBASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
SEC61A2Q9H9S3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 AL356292.1-201ENST00000283110 373 ntBASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 RNU6-1180P-201ENST00000364935 107 ntBASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 SNORD116-14-201ENST00000383894 92 ntBASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 SNORD116-17-201ENST00000383929 92 ntBASIC2.8□□□□□ -1.96
SEC61A2Q9H9S3 SNORA9-201ENST00000384215 133 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms