Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 FO624990.1-201ENST00000636373 85 ntBASIC2.4□□□□□ -2.03
CDT1Q9H211 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CDT1Q9H211 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CDT1Q9H211 ZNF204P-201ENST00000416749 2397 ntBASIC2.39□□□□□ -2.03
CDT1Q9H211 AC131280.1-202ENST00000624067 4211 ntBASIC2.39□□□□□ -2.03
CDT1Q9H211 SNORD115-8-201ENST00000363856 82 ntBASIC2.39□□□□□ -2.03
CDT1Q9H211 SNORD32B-201ENST00000364460 84 ntBASIC2.39□□□□□ -2.03
CDT1Q9H211 RNA5SP125-201ENST00000364843 120 ntBASIC2.39□□□□□ -2.03
CDT1Q9H211 SNORD115-38-201ENST00000365037 82 ntBASIC2.39□□□□□ -2.03
CDT1Q9H211 Y_RNA.602-201ENST00000410535 92 ntBASIC2.39□□□□□ -2.03
CDT1Q9H211 AL139109.1-201ENST00000455491 297 ntBASIC2.39□□□□□ -2.03
CDT1Q9H211 snoU13.23-201ENST00000458863 104 ntBASIC2.39□□□□□ -2.03
CDT1Q9H211 AC007215.1-201ENST00000464893 276 ntBASIC2.39□□□□□ -2.03
CDT1Q9H211 HMGB3P17-201ENST00000504195 649 ntBASIC2.39□□□□□ -2.03
CDT1Q9H211 MIR2355-201ENST00000517199 87 ntBASIC2.39□□□□□ -2.03
CDT1Q9H211 DEFB108E-201ENST00000524692 240 ntBASIC2.39□□□□□ -2.03
CDT1Q9H211 MIR3668-201ENST00000582138 75 ntBASIC2.39□□□□□ -2.03
CDT1Q9H211 SDR42E1P4-201ENST00000620894 481 ntBASIC2.39□□□□□ -2.03
CDT1Q9H211 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CDT1Q9H211 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CDT1Q9H211 LINC02555-201ENST00000563933 1951 ntBASIC2.38□□□□□ -2.03
CDT1Q9H211 RNU6-873P-201ENST00000363833 107 ntBASIC2.38□□□□□ -2.03
CDT1Q9H211 RNU1-138P-201ENST00000384093 164 ntBASIC2.38□□□□□ -2.03
CDT1Q9H211 Y_RNA.539-201ENST00000384635 107 ntBASIC2.38□□□□□ -2.03
CDT1Q9H211 MIR524-201ENST00000385242 87 ntBASIC2.38□□□□□ -2.03
CDT1Q9H211 RNU2-63P-201ENST00000410792 194 ntBASIC2.38□□□□□ -2.03
CDT1Q9H211 RNU2-14P-201ENST00000411053 191 ntBASIC2.38□□□□□ -2.03
CDT1Q9H211 AC027124.2-201ENST00000428249 105 ntBASIC2.38□□□□□ -2.03
CDT1Q9H211 CYP2C59P-201ENST00000457790 269 ntBASIC2.38□□□□□ -2.03
CDT1Q9H211 snoU13.15-201ENST00000459407 104 ntBASIC2.38□□□□□ -2.03
CDT1Q9H211 MIR449C-201ENST00000516047 92 ntBASIC2.38□□□□□ -2.03
CDT1Q9H211 RNA5SP200-201ENST00000516360 103 ntBASIC2.38□□□□□ -2.03
CDT1Q9H211 SCARNA16.3-201ENST00000516595 184 ntBASIC2.38□□□□□ -2.03
CDT1Q9H211 RNU6-1198P-201ENST00000516904 67 ntBASIC2.38□□□□□ -2.03
CDT1Q9H211 Y_RNA.713-201ENST00000517013 96 ntBASIC2.38□□□□□ -2.03
CDT1Q9H211 RRN3P3-201ENST00000549207 578 ntBASIC2.38□□□□□ -2.03
CDT1Q9H211 MIR4643-201ENST00000577473 78 ntBASIC2.38□□□□□ -2.03
CDT1Q9H211 MIR4648-201ENST00000580107 72 ntBASIC2.38□□□□□ -2.03
CDT1Q9H211 MZT1P2-201ENST00000604387 248 ntBASIC2.38□□□□□ -2.03
CDT1Q9H211 AL355297.2-201ENST00000604792 129 ntBASIC2.38□□□□□ -2.03
CDT1Q9H211 AL137847.3-201ENST00000611521 109 ntBASIC2.38□□□□□ -2.03
CDT1Q9H211 MIR376A1-201ENST00000616574 68 ntBASIC2.38□□□□□ -2.03
CDT1Q9H211 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.38□□□□□ -2.03
CDT1Q9H211 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.38□□□□□ -2.03
CDT1Q9H211 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDT1Q9H211 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.38□□□□□ -2.03
CDT1Q9H211 RNU6-626P-201ENST00000363354 107 ntBASIC2.37□□□□□ -2.03
CDT1Q9H211 RNU1-23P-201ENST00000363361 144 ntBASIC2.37□□□□□ -2.03
CDT1Q9H211 SNORD113-8-201ENST00000363497 74 ntBASIC2.37□□□□□ -2.03
CDT1Q9H211 RNU1-52P-201ENST00000384190 164 ntBASIC2.37□□□□□ -2.03
CDT1Q9H211 SNORA64-201ENST00000384674 134 ntBASIC2.37□□□□□ -2.03
CDT1Q9H211 MIR95-201ENST00000385072 81 ntBASIC2.37□□□□□ -2.03
CDT1Q9H211 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CDT1Q9H211 RNU6-482P-201ENST00000391068 107 ntBASIC2.37□□□□□ -2.03
CDT1Q9H211 SNORD78.2-201ENST00000391076 69 ntBASIC2.37□□□□□ -2.03
CDT1Q9H211 RNU4-30P-201ENST00000410245 143 ntBASIC2.37□□□□□ -2.03
CDT1Q9H211 AC004866.1-201ENST00000411748 78 ntBASIC2.37□□□□□ -2.03
CDT1Q9H211 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.37□□□□□ -2.03
CDT1Q9H211 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.37□□□□□ -2.03
CDT1Q9H211 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.37□□□□□ -2.03
CDT1Q9H211 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.37□□□□□ -2.03
CDT1Q9H211 RNU6-496P-201ENST00000516145 99 ntBASIC2.37□□□□□ -2.03
CDT1Q9H211 RNA5SP54-201ENST00000516951 92 ntBASIC2.37□□□□□ -2.03
CDT1Q9H211 RNU6-111P-201ENST00000517179 105 ntBASIC2.37□□□□□ -2.03
CDT1Q9H211 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.37□□□□□ -2.03
CDT1Q9H211 DEFB131C-201ENST00000528817 165 ntBASIC2.37□□□□□ -2.03
CDT1Q9H211 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.37□□□□□ -2.03
CDT1Q9H211 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.37□□□□□ -2.03
CDT1Q9H211 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.37□□□□□ -2.03
CDT1Q9H211 BX322639.1-202ENST00000423987 2213 ntBASIC2.37□□□□□ -2.03
CDT1Q9H211 RNU6-137P-201ENST00000363680 108 ntBASIC2.36□□□□□ -2.03
CDT1Q9H211 Y_RNA.257-201ENST00000364596 102 ntBASIC2.36□□□□□ -2.03
CDT1Q9H211 RNA5SP240-201ENST00000365355 128 ntBASIC2.36□□□□□ -2.03
CDT1Q9H211 SNORA18.2-201ENST00000383865 132 ntBASIC2.36□□□□□ -2.03
CDT1Q9H211 AC005002.2-201ENST00000438228 269 ntBASIC2.36□□□□□ -2.03
CDT1Q9H211 HSPE1P25-201ENST00000455484 251 ntBASIC2.36□□□□□ -2.03
CDT1Q9H211 RN7SKP49-201ENST00000516675 260 ntBASIC2.36□□□□□ -2.03
CDT1Q9H211 RNU6-965P-201ENST00000516721 96 ntBASIC2.36□□□□□ -2.03
CDT1Q9H211 SCARNA24.2-201ENST00000516968 130 ntBASIC2.36□□□□□ -2.03
CDT1Q9H211 Y_RNA.772-201ENST00000606692 102 ntBASIC2.36□□□□□ -2.03
CDT1Q9H211 MIR6132-201ENST00000622083 109 ntBASIC2.36□□□□□ -2.03
CDT1Q9H211 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CDT1Q9H211 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CDT1Q9H211 Z82209.1-201ENST00000422141 2135 ntBASIC2.36□□□□□ -2.03
CDT1Q9H211 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CDT1Q9H211 RNU6-338P-201ENST00000383888 105 ntBASIC2.35□□□□□ -2.03
CDT1Q9H211 RNU6-20P-201ENST00000384106 107 ntBASIC2.35□□□□□ -2.03
CDT1Q9H211 AL023284.1-201ENST00000403956 276 ntBASIC2.35□□□□□ -2.03
CDT1Q9H211 MIR1294-201ENST00000408503 142 ntBASIC2.35□□□□□ -2.03
CDT1Q9H211 SNORA11.4-201ENST00000408823 129 ntBASIC2.35□□□□□ -2.03
CDT1Q9H211 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.35□□□□□ -2.03
CDT1Q9H211 AC139712.2-201ENST00000424302 339 ntBASIC2.35□□□□□ -2.03
CDT1Q9H211 AC004386.2-201ENST00000441858 148 ntBASIC2.35□□□□□ -2.03
CDT1Q9H211 RPL39P38-201ENST00000467018 153 ntBASIC2.35□□□□□ -2.03
CDT1Q9H211 RNU6-1338P-201ENST00000516328 91 ntBASIC2.35□□□□□ -2.03
CDT1Q9H211 SNORA25.14-201ENST00000516481 132 ntBASIC2.35□□□□□ -2.03
CDT1Q9H211 SNORA31.15-201ENST00000516771 132 ntBASIC2.35□□□□□ -2.03
CDT1Q9H211 AC091144.1-201ENST00000519573 138 ntBASIC2.35□□□□□ -2.03
CDT1Q9H211 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.35□□□□□ -2.03
CDT1Q9H211 AL049779.4-201ENST00000604500 156 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 157.8 ms