Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RNU6-778P-201ENST00000363269 103 ntBASIC4.23□□□□□ -1.73
TRIM47Q96LD4 RNU4-36P-201ENST00000364294 144 ntBASIC4.23□□□□□ -1.73
TRIM47Q96LD4 Y_RNA.344-201ENST00000365381 112 ntBASIC4.23□□□□□ -1.73
TRIM47Q96LD4 MIR548B-201ENST00000385247 97 ntBASIC4.23□□□□□ -1.73
TRIM47Q96LD4 RNA5SP390-201ENST00000410191 113 ntBASIC4.23□□□□□ -1.73
TRIM47Q96LD4 SNORA71B-202ENST00000439232 272 ntBASIC4.23□□□□□ -1.73
TRIM47Q96LD4 UBE2DNL-203ENST00000474922 222 ntBASIC4.23□□□□□ -1.73
TRIM47Q96LD4 AIG1P1-201ENST00000503376 148 ntBASIC4.23□□□□□ -1.73
TRIM47Q96LD4 AC083906.5-201ENST00000503722 328 ntBASIC4.23□□□□□ -1.73
TRIM47Q96LD4 RNU7-61P-201ENST00000515897 61 ntBASIC4.23□□□□□ -1.73
TRIM47Q96LD4 RNU2-27P-201ENST00000516185 142 ntBASIC4.23□□□□□ -1.73
TRIM47Q96LD4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.23□□□□□ -1.73
TRIM47Q96LD4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM47Q96LD4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM47Q96LD4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM47Q96LD4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM47Q96LD4 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM47Q96LD4 SNORA18.2-201ENST00000383865 132 ntBASIC4.22□□□□□ -1.73
TRIM47Q96LD4 RNU6-622P-201ENST00000384272 103 ntBASIC4.22□□□□□ -1.73
TRIM47Q96LD4 SNORA67.2-201ENST00000384300 149 ntBASIC4.22□□□□□ -1.73
TRIM47Q96LD4 NDUFB1P1-201ENST00000435191 180 ntBASIC4.22□□□□□ -1.73
TRIM47Q96LD4 SNRPGP5-201ENST00000456003 220 ntBASIC4.22□□□□□ -1.73
TRIM47Q96LD4 RNU6-162P-201ENST00000516228 103 ntBASIC4.22□□□□□ -1.73
TRIM47Q96LD4 AC107294.3-201ENST00000609211 526 ntBASIC4.22□□□□□ -1.73
TRIM47Q96LD4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM47Q96LD4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM47Q96LD4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
TRIM47Q96LD4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
TRIM47Q96LD4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
TRIM47Q96LD4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
TRIM47Q96LD4 RNU6-1280P-201ENST00000365211 107 ntBASIC4.21□□□□□ -1.74
TRIM47Q96LD4 RNU1-73P-201ENST00000383971 164 ntBASIC4.21□□□□□ -1.74
TRIM47Q96LD4 MIR759-201ENST00000390224 91 ntBASIC4.21□□□□□ -1.74
TRIM47Q96LD4 RPL37P4-201ENST00000448908 268 ntBASIC4.21□□□□□ -1.74
TRIM47Q96LD4 AC023449.1-201ENST00000454464 154 ntBASIC4.21□□□□□ -1.74
TRIM47Q96LD4 SNORA70.18-201ENST00000516696 98 ntBASIC4.21□□□□□ -1.74
TRIM47Q96LD4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM47Q96LD4 RPL23AP91-201ENST00000569211 455 ntBASIC4.21□□□□□ -1.74
TRIM47Q96LD4 MIR7112-201ENST00000616126 65 ntBASIC4.21□□□□□ -1.74
TRIM47Q96LD4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
TRIM47Q96LD4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM47Q96LD4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM47Q96LD4 AL159152.1-201ENST00000635019 2587 ntBASIC4.2□□□□□ -1.74
TRIM47Q96LD4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.2□□□□□ -1.74
TRIM47Q96LD4 Y_RNA.66-201ENST00000362862 102 ntBASIC4.2□□□□□ -1.74
TRIM47Q96LD4 RNA5SP235-201ENST00000365411 114 ntBASIC4.2□□□□□ -1.74
TRIM47Q96LD4 RNA5SP167-201ENST00000365461 116 ntBASIC4.2□□□□□ -1.74
TRIM47Q96LD4 SNORA1-201ENST00000384107 130 ntBASIC4.2□□□□□ -1.74
TRIM47Q96LD4 MT-TI-201ENST00000387365 69 ntBASIC4.2□□□□□ -1.74
TRIM47Q96LD4 MIR889-201ENST00000401280 79 ntBASIC4.2□□□□□ -1.74
TRIM47Q96LD4 AL355796.1-201ENST00000406706 323 ntBASIC4.2□□□□□ -1.74
TRIM47Q96LD4 RNU6-402P-201ENST00000410678 103 ntBASIC4.2□□□□□ -1.74
TRIM47Q96LD4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC4.2□□□□□ -1.74
TRIM47Q96LD4 HMGN2P30-201ENST00000423237 256 ntBASIC4.2□□□□□ -1.74
TRIM47Q96LD4 AL121890.1-201ENST00000435457 205 ntBASIC4.2□□□□□ -1.74
TRIM47Q96LD4 RNY4P20-201ENST00000516678 93 ntBASIC4.2□□□□□ -1.74
TRIM47Q96LD4 RNU6-1149P-201ENST00000516810 97 ntBASIC4.2□□□□□ -1.74
TRIM47Q96LD4 RN7SKP209-201ENST00000516888 304 ntBASIC4.2□□□□□ -1.74
TRIM47Q96LD4 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC4.2□□□□□ -1.74
TRIM47Q96LD4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.2□□□□□ -1.74
TRIM47Q96LD4 PCGEM1.1-201ENST00000613431 131 ntBASIC4.2□□□□□ -1.74
TRIM47Q96LD4 U7.3-201ENST00000616123 62 ntBASIC4.2□□□□□ -1.74
TRIM47Q96LD4 Pinc.1-201ENST00000616452 154 ntBASIC4.2□□□□□ -1.74
TRIM47Q96LD4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.2□□□□□ -1.74
TRIM47Q96LD4 AC093908.1-201ENST00000623125 8092 ntBASIC4.2□□□□□ -1.74
TRIM47Q96LD4 AC002064.3-201ENST00000623448 346 ntBASIC4.2□□□□□ -1.74
TRIM47Q96LD4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM47Q96LD4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.2□□□□□ -1.74
TRIM47Q96LD4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM47Q96LD4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM47Q96LD4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM47Q96LD4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.19□□□□□ -1.74
TRIM47Q96LD4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM47Q96LD4 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
TRIM47Q96LD4 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM47Q96LD4 AL356292.1-201ENST00000283110 373 ntBASIC4.19□□□□□ -1.74
TRIM47Q96LD4 MIR325-201ENST00000385260 98 ntBASIC4.19□□□□□ -1.74
TRIM47Q96LD4 MIR1289-1-201ENST00000408836 144 ntBASIC4.19□□□□□ -1.74
TRIM47Q96LD4 RNA5SP201-201ENST00000410316 124 ntBASIC4.19□□□□□ -1.74
TRIM47Q96LD4 RPL39P25-201ENST00000449384 154 ntBASIC4.19□□□□□ -1.74
TRIM47Q96LD4 AC023141.12-201ENST00000512399 199 ntBASIC4.19□□□□□ -1.74
TRIM47Q96LD4 RNU6-240P-201ENST00000516098 97 ntBASIC4.19□□□□□ -1.74
TRIM47Q96LD4 RN7SKP83-201ENST00000516512 178 ntBASIC4.19□□□□□ -1.74
TRIM47Q96LD4 MIR2114-201ENST00000516645 80 ntBASIC4.19□□□□□ -1.74
TRIM47Q96LD4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC4.19□□□□□ -1.74
TRIM47Q96LD4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM47Q96LD4 AL451007.1-201ENST00000595491 289 ntBASIC4.19□□□□□ -1.74
TRIM47Q96LD4 AL034555.1-201ENST00000604816 211 ntBASIC4.19□□□□□ -1.74
TRIM47Q96LD4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.19□□□□□ -1.74
TRIM47Q96LD4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
TRIM47Q96LD4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM47Q96LD4 AC002543.1-201ENST00000299783 1954 ntBASIC4.18□□□□□ -1.74
TRIM47Q96LD4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM47Q96LD4 RNU4-35P-201ENST00000362588 141 ntBASIC4.18□□□□□ -1.74
TRIM47Q96LD4 SNORD115-13-201ENST00000363358 82 ntBASIC4.18□□□□□ -1.74
TRIM47Q96LD4 SNORD115-16-201ENST00000363887 82 ntBASIC4.18□□□□□ -1.74
TRIM47Q96LD4 SNORD115-1-201ENST00000364961 82 ntBASIC4.18□□□□□ -1.74
TRIM47Q96LD4 Y_RNA.486-201ENST00000384398 107 ntBASIC4.18□□□□□ -1.74
TRIM47Q96LD4 Y_RNA.510-201ENST00000384511 114 ntBASIC4.18□□□□□ -1.74
TRIM47Q96LD4 AL451046.2-201ENST00000403074 277 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms