Protein–RNA interactions for Protein: Q8IWY4

SCUBE1, Signal peptide, CUB and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1Q8IWY4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SCUBE1Q8IWY4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.14□□□□□ -1.91
SCUBE1Q8IWY4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SCUBE1Q8IWY4 Z83843.1-201ENST00000604070 3685 ntBASIC3.14□□□□□ -1.91
SCUBE1Q8IWY4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SCUBE1Q8IWY4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 Y_RNA.127-201ENST00000363386 109 ntBASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 Y_RNA.136-201ENST00000363444 102 ntBASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 RNU6-743P-201ENST00000364151 106 ntBASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 RNA5SP267-201ENST00000364893 126 ntBASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 SNORD31B-201ENST00000364977 69 ntBASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 RNVU1-14-201ENST00000384770 164 ntBASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 MIR491-201ENST00000384877 84 ntBASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 MIR95-201ENST00000385072 81 ntBASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 MIR569-201ENST00000385228 96 ntBASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 RNU7-57P-201ENST00000459540 60 ntBASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 RN7SKP43-201ENST00000516173 320 ntBASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 SCARNA13-201ENST00000516672 275 ntBASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 RN7SKP282-201ENST00000516824 299 ntBASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 RNU6-971P-201ENST00000516920 106 ntBASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 RNU2-12P-201ENST00000517216 168 ntBASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 SNORA31.26-201ENST00000517250 137 ntBASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 AC022616.8-201ENST00000533569 253 ntBASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 AC138915.1-201ENST00000565427 1685 ntBASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 AC092435.3-201ENST00000565538 3654 ntBASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.13□□□□□ -1.91
SCUBE1Q8IWY4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.12□□□□□ -1.91
SCUBE1Q8IWY4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SCUBE1Q8IWY4 RNU1-70P-201ENST00000362618 164 ntBASIC3.12□□□□□ -1.91
SCUBE1Q8IWY4 Y_RNA.71-201ENST00000362892 104 ntBASIC3.12□□□□□ -1.91
SCUBE1Q8IWY4 Y_RNA.329-201ENST00000365209 107 ntBASIC3.12□□□□□ -1.91
SCUBE1Q8IWY4 U3.40-201ENST00000408706 208 ntBASIC3.12□□□□□ -1.91
SCUBE1Q8IWY4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.12□□□□□ -1.91
SCUBE1Q8IWY4 AC005326.1-201ENST00000429197 123 ntBASIC3.12□□□□□ -1.91
SCUBE1Q8IWY4 AC074290.1-201ENST00000448883 135 ntBASIC3.12□□□□□ -1.91
SCUBE1Q8IWY4 HMGN2P18-201ENST00000450680 270 ntBASIC3.12□□□□□ -1.91
SCUBE1Q8IWY4 EEF1B2P7-201ENST00000451177 676 ntBASIC3.12□□□□□ -1.91
SCUBE1Q8IWY4 AC010409.1-201ENST00000487382 476 ntBASIC3.12□□□□□ -1.91
SCUBE1Q8IWY4 AC091959.1-201ENST00000495857 238 ntBASIC3.12□□□□□ -1.91
SCUBE1Q8IWY4 RNU6-1234P-201ENST00000516877 103 ntBASIC3.12□□□□□ -1.91
SCUBE1Q8IWY4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.12□□□□□ -1.91
SCUBE1Q8IWY4 MIR3145-201ENST00000580727 82 ntBASIC3.12□□□□□ -1.91
SCUBE1Q8IWY4 MIR3616-201ENST00000584070 92 ntBASIC3.12□□□□□ -1.91
SCUBE1Q8IWY4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SCUBE1Q8IWY4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.12□□□□□ -1.91
SCUBE1Q8IWY4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SCUBE1Q8IWY4 RNU1-23P-201ENST00000363361 144 ntBASIC3.11□□□□□ -1.91
SCUBE1Q8IWY4 RNU6-1289P-201ENST00000384431 106 ntBASIC3.11□□□□□ -1.91
SCUBE1Q8IWY4 MIR561-201ENST00000385216 97 ntBASIC3.11□□□□□ -1.91
SCUBE1Q8IWY4 MIR1185-2-201ENST00000408687 86 ntBASIC3.11□□□□□ -1.91
SCUBE1Q8IWY4 RNA5SP229-201ENST00000410809 99 ntBASIC3.11□□□□□ -1.91
SCUBE1Q8IWY4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.11□□□□□ -1.91
SCUBE1Q8IWY4 RNU6-436P-201ENST00000516171 114 ntBASIC3.11□□□□□ -1.91
SCUBE1Q8IWY4 SNORA27.4-201ENST00000516650 95 ntBASIC3.11□□□□□ -1.91
SCUBE1Q8IWY4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.11□□□□□ -1.91
SCUBE1Q8IWY4 DEFB117-201ENST00000602356 141 ntBASIC3.11□□□□□ -1.91
SCUBE1Q8IWY4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SCUBE1Q8IWY4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.11□□□□□ -1.91
SCUBE1Q8IWY4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SCUBE1Q8IWY4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.11□□□□□ -1.91
SCUBE1Q8IWY4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SCUBE1Q8IWY4 RNU4-80P-201ENST00000363200 141 ntBASIC3.1□□□□□ -1.91
SCUBE1Q8IWY4 MIR627-201ENST00000384979 97 ntBASIC3.1□□□□□ -1.91
SCUBE1Q8IWY4 RN7SKP220-201ENST00000410611 288 ntBASIC3.1□□□□□ -1.91
SCUBE1Q8IWY4 SNORD2.1-201ENST00000458762 69 ntBASIC3.1□□□□□ -1.91
SCUBE1Q8IWY4 AC091826.1-201ENST00000514065 313 ntBASIC3.1□□□□□ -1.91
SCUBE1Q8IWY4 Y_RNA.686-201ENST00000516548 134 ntBASIC3.1□□□□□ -1.91
SCUBE1Q8IWY4 SNORA48.11-201ENST00000517015 89 ntBASIC3.1□□□□□ -1.91
SCUBE1Q8IWY4 RNA5SP490-201ENST00000517141 136 ntBASIC3.1□□□□□ -1.91
SCUBE1Q8IWY4 SNORA70.24-201ENST00000517233 118 ntBASIC3.1□□□□□ -1.91
SCUBE1Q8IWY4 MIR3200-201ENST00000580767 85 ntBASIC3.1□□□□□ -1.91
SCUBE1Q8IWY4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.1□□□□□ -1.91
SCUBE1Q8IWY4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.1□□□□□ -1.91
SCUBE1Q8IWY4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SCUBE1Q8IWY4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SCUBE1Q8IWY4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
SCUBE1Q8IWY4 AC108206.1-201ENST00000570186 4159 ntBASIC3.09□□□□□ -1.91
SCUBE1Q8IWY4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.09□□□□□ -1.91
SCUBE1Q8IWY4 RNU6-151P-201ENST00000364158 107 ntBASIC3.09□□□□□ -1.91
SCUBE1Q8IWY4 SNORD14D-201ENST00000384390 87 ntBASIC3.09□□□□□ -1.91
SCUBE1Q8IWY4 AL357139.1-201ENST00000407792 426 ntBASIC3.09□□□□□ -1.91
SCUBE1Q8IWY4 OOSP1P1-201ENST00000423265 274 ntBASIC3.09□□□□□ -1.91
SCUBE1Q8IWY4 AC024067.1-201ENST00000426199 223 ntBASIC3.09□□□□□ -1.91
SCUBE1Q8IWY4 AL445687.1-201ENST00000439946 251 ntBASIC3.09□□□□□ -1.91
SCUBE1Q8IWY4 Z96811.1-201ENST00000445880 108 ntBASIC3.09□□□□□ -1.91
SCUBE1Q8IWY4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.09□□□□□ -1.91
SCUBE1Q8IWY4 MIR6733-201ENST00000635723 61 ntBASIC3.09□□□□□ -1.91
SCUBE1Q8IWY4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.09□□□□□ -1.91
SCUBE1Q8IWY4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SCUBE1Q8IWY4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms