Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.99□□□□□ -1.93
DDX53Q86TM3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
DDX53Q86TM3 RNU4-80P-201ENST00000363200 141 ntBASIC2.98□□□□□ -1.93
DDX53Q86TM3 RNU6-1180P-201ENST00000364935 107 ntBASIC2.98□□□□□ -1.93
DDX53Q86TM3 Y_RNA.329-201ENST00000365209 107 ntBASIC2.98□□□□□ -1.93
DDX53Q86TM3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
DDX53Q86TM3 SNORD14D-201ENST00000384390 87 ntBASIC2.98□□□□□ -1.93
DDX53Q86TM3 AL357139.1-201ENST00000407792 426 ntBASIC2.98□□□□□ -1.93
DDX53Q86TM3 MIR1261-201ENST00000408659 82 ntBASIC2.98□□□□□ -1.93
DDX53Q86TM3 MIR1185-2-201ENST00000408687 86 ntBASIC2.98□□□□□ -1.93
DDX53Q86TM3 AC244505.4-201ENST00000434905 287 ntBASIC2.98□□□□□ -1.93
DDX53Q86TM3 SSXP5-201ENST00000443473 287 ntBASIC2.98□□□□□ -1.93
DDX53Q86TM3 AC074290.1-201ENST00000448883 135 ntBASIC2.98□□□□□ -1.93
DDX53Q86TM3 AC016717.1-201ENST00000448918 286 ntBASIC2.98□□□□□ -1.93
DDX53Q86TM3 AC016925.1-201ENST00000458303 298 ntBASIC2.98□□□□□ -1.93
DDX53Q86TM3 RN7SL75P-201ENST00000461926 281 ntBASIC2.98□□□□□ -1.93
DDX53Q86TM3 RNA5SP385-201ENST00000515947 110 ntBASIC2.98□□□□□ -1.93
DDX53Q86TM3 RNU6-436P-201ENST00000516171 114 ntBASIC2.98□□□□□ -1.93
DDX53Q86TM3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.98□□□□□ -1.93
DDX53Q86TM3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.98□□□□□ -1.93
DDX53Q86TM3 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.98□□□□□ -1.93
DDX53Q86TM3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
DDX53Q86TM3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.98□□□□□ -1.93
DDX53Q86TM3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.97□□□□□ -1.93
DDX53Q86TM3 SNORD115-30-201ENST00000364117 82 ntBASIC2.97□□□□□ -1.93
DDX53Q86TM3 RNU6-740P-201ENST00000364734 105 ntBASIC2.97□□□□□ -1.93
DDX53Q86TM3 RNU6-975P-201ENST00000384296 105 ntBASIC2.97□□□□□ -1.93
DDX53Q86TM3 Y_RNA.515-201ENST00000384535 112 ntBASIC2.97□□□□□ -1.93
DDX53Q86TM3 SNORA46-201ENST00000384762 135 ntBASIC2.97□□□□□ -1.93
DDX53Q86TM3 MIR561-201ENST00000385216 97 ntBASIC2.97□□□□□ -1.93
DDX53Q86TM3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
DDX53Q86TM3 RNU2-48P-201ENST00000410694 191 ntBASIC2.97□□□□□ -1.93
DDX53Q86TM3 AC092427.1-202ENST00000430569 476 ntBASIC2.97□□□□□ -1.93
DDX53Q86TM3 UBBP3-201ENST00000445497 241 ntBASIC2.97□□□□□ -1.93
DDX53Q86TM3 RNU6-991P-201ENST00000516168 107 ntBASIC2.97□□□□□ -1.93
DDX53Q86TM3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.97□□□□□ -1.93
DDX53Q86TM3 AL512605.2-201ENST00000592972 256 ntBASIC2.97□□□□□ -1.93
DDX53Q86TM3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
DDX53Q86TM3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
DDX53Q86TM3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.96□□□□□ -1.94
DDX53Q86TM3 Y_RNA.269-201ENST00000364685 89 ntBASIC2.96□□□□□ -1.94
DDX53Q86TM3 RNU6-418P-201ENST00000384035 107 ntBASIC2.96□□□□□ -1.94
DDX53Q86TM3 RN7SKP123-201ENST00000410732 291 ntBASIC2.96□□□□□ -1.94
DDX53Q86TM3 RNU6-57P-201ENST00000411348 103 ntBASIC2.96□□□□□ -1.94
DDX53Q86TM3 AC018868.1-201ENST00000491307 315 ntBASIC2.96□□□□□ -1.94
DDX53Q86TM3 AC025754.2-201ENST00000606491 432 ntBASIC2.96□□□□□ -1.94
DDX53Q86TM3 snoZ196.1-201ENST00000625269 89 ntBASIC2.96□□□□□ -1.94
DDX53Q86TM3 U6.115-201ENST00000636045 103 ntBASIC2.96□□□□□ -1.94
DDX53Q86TM3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
DDX53Q86TM3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
DDX53Q86TM3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
DDX53Q86TM3 Y_RNA.243-201ENST00000364481 109 ntBASIC2.95□□□□□ -1.94
DDX53Q86TM3 Y_RNA.275-201ENST00000364726 110 ntBASIC2.95□□□□□ -1.94
DDX53Q86TM3 MIR887-201ENST00000401258 79 ntBASIC2.95□□□□□ -1.94
DDX53Q86TM3 AL031003.1-201ENST00000404229 172 ntBASIC2.95□□□□□ -1.94
DDX53Q86TM3 RN7SKP58-201ENST00000411010 305 ntBASIC2.95□□□□□ -1.94
DDX53Q86TM3 RN7SKP43-201ENST00000516173 320 ntBASIC2.95□□□□□ -1.94
DDX53Q86TM3 RNU6-191P-201ENST00000516295 94 ntBASIC2.95□□□□□ -1.94
DDX53Q86TM3 SNORA27.4-201ENST00000516650 95 ntBASIC2.95□□□□□ -1.94
DDX53Q86TM3 RNU6-667P-201ENST00000517186 102 ntBASIC2.95□□□□□ -1.94
DDX53Q86TM3 RN7SKP40-201ENST00000517211 242 ntBASIC2.95□□□□□ -1.94
DDX53Q86TM3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.95□□□□□ -1.94
DDX53Q86TM3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
DDX53Q86TM3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
DDX53Q86TM3 RNU1-35P-201ENST00000362782 153 ntBASIC2.94□□□□□ -1.94
DDX53Q86TM3 Y_RNA.117-201ENST00000363294 101 ntBASIC2.94□□□□□ -1.94
DDX53Q86TM3 RNU6-662P-201ENST00000384253 104 ntBASIC2.94□□□□□ -1.94
DDX53Q86TM3 MIR512-1-201ENST00000384913 84 ntBASIC2.94□□□□□ -1.94
DDX53Q86TM3 SNORD58.1-201ENST00000391313 66 ntBASIC2.94□□□□□ -1.94
DDX53Q86TM3 RNU2-14P-201ENST00000411053 191 ntBASIC2.94□□□□□ -1.94
DDX53Q86TM3 AC104389.3-201ENST00000445629 235 ntBASIC2.94□□□□□ -1.94
DDX53Q86TM3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.94□□□□□ -1.94
DDX53Q86TM3 AL137159.1-201ENST00000452808 512 ntBASIC2.94□□□□□ -1.94
DDX53Q86TM3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.94□□□□□ -1.94
DDX53Q86TM3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.94□□□□□ -1.94
DDX53Q86TM3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.94□□□□□ -1.94
DDX53Q86TM3 AL162424.1-201ENST00000602325 221 ntBASIC2.94□□□□□ -1.94
DDX53Q86TM3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.93□□□□□ -1.94
DDX53Q86TM3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.93□□□□□ -1.94
DDX53Q86TM3 RNA5SP68-201ENST00000363885 119 ntBASIC2.93□□□□□ -1.94
DDX53Q86TM3 SNORA25B-201ENST00000365507 128 ntBASIC2.93□□□□□ -1.94
DDX53Q86TM3 MIR592-201ENST00000384959 97 ntBASIC2.93□□□□□ -1.94
DDX53Q86TM3 RNU6-651P-201ENST00000411040 105 ntBASIC2.93□□□□□ -1.94
DDX53Q86TM3 RNA5SP508-201ENST00000411327 119 ntBASIC2.93□□□□□ -1.94
DDX53Q86TM3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.93□□□□□ -1.94
DDX53Q86TM3 AL513328.1-201ENST00000446460 224 ntBASIC2.93□□□□□ -1.94
DDX53Q86TM3 UQCRHP3-201ENST00000451503 251 ntBASIC2.93□□□□□ -1.94
DDX53Q86TM3 AC096725.1-201ENST00000514266 313 ntBASIC2.93□□□□□ -1.94
DDX53Q86TM3 RNU4-71P-201ENST00000516258 113 ntBASIC2.93□□□□□ -1.94
DDX53Q86TM3 RNU6-948P-201ENST00000516374 107 ntBASIC2.93□□□□□ -1.94
DDX53Q86TM3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.93□□□□□ -1.94
DDX53Q86TM3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.93□□□□□ -1.94
DDX53Q86TM3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.93□□□□□ -1.94
DDX53Q86TM3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
DDX53Q86TM3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
DDX53Q86TM3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
DDX53Q86TM3 UBE2WP1-201ENST00000362030 340 ntBASIC2.92□□□□□ -1.94
DDX53Q86TM3 Y_RNA.76-201ENST00000362931 109 ntBASIC2.92□□□□□ -1.94
DDX53Q86TM3 RNA5SP344-201ENST00000411081 104 ntBASIC2.92□□□□□ -1.94
DDX53Q86TM3 AL121890.1-201ENST00000435457 205 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 188.2 ms