Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 HMGN1P18-201ENST00000457642 277 ntBASIC3.04□□□□□ -1.92
HLA-DQA1Q5Y7H0 MIR2276-201ENST00000516886 89 ntBASIC3.04□□□□□ -1.92
HLA-DQA1Q5Y7H0 RNU6-971P-201ENST00000516920 106 ntBASIC3.04□□□□□ -1.92
HLA-DQA1Q5Y7H0 AC112693.2-201ENST00000556538 232 ntBASIC3.04□□□□□ -1.92
HLA-DQA1Q5Y7H0 MIR5047-201ENST00000579212 100 ntBASIC3.04□□□□□ -1.92
HLA-DQA1Q5Y7H0 AC005972.2-201ENST00000604690 348 ntBASIC3.04□□□□□ -1.92
HLA-DQA1Q5Y7H0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DQA1Q5Y7H0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
HLA-DQA1Q5Y7H0 MIR7153-201ENST00000637758 57 ntBASIC3.04□□□□□ -1.92
HLA-DQA1Q5Y7H0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DQA1Q5Y7H0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.04□□□□□ -1.92
HLA-DQA1Q5Y7H0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.04□□□□□ -1.92
HLA-DQA1Q5Y7H0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DQA1Q5Y7H0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DQA1Q5Y7H0 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DQA1Q5Y7H0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DQA1Q5Y7H0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.03□□□□□ -1.92
HLA-DQA1Q5Y7H0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DQA1Q5Y7H0 AL159152.1-201ENST00000635019 2587 ntBASIC3.03□□□□□ -1.92
HLA-DQA1Q5Y7H0 RNU6-271P-201ENST00000363858 105 ntBASIC3.03□□□□□ -1.92
HLA-DQA1Q5Y7H0 RNU6-438P-201ENST00000365561 103 ntBASIC3.03□□□□□ -1.92
HLA-DQA1Q5Y7H0 RNU6-1323P-201ENST00000384025 107 ntBASIC3.03□□□□□ -1.92
HLA-DQA1Q5Y7H0 RNVU1-14-201ENST00000384770 164 ntBASIC3.03□□□□□ -1.92
HLA-DQA1Q5Y7H0 SNORD37.2-201ENST00000391075 66 ntBASIC3.03□□□□□ -1.92
HLA-DQA1Q5Y7H0 Y_RNA.622-201ENST00000411091 108 ntBASIC3.03□□□□□ -1.92
HLA-DQA1Q5Y7H0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.03□□□□□ -1.92
HLA-DQA1Q5Y7H0 HMGN2P18-201ENST00000450680 270 ntBASIC3.03□□□□□ -1.92
HLA-DQA1Q5Y7H0 AC006539.3-201ENST00000454258 129 ntBASIC3.03□□□□□ -1.92
HLA-DQA1Q5Y7H0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DQA1Q5Y7H0 RNU6-948P-201ENST00000516374 107 ntBASIC3.03□□□□□ -1.92
HLA-DQA1Q5Y7H0 AC025647.1-201ENST00000517879 253 ntBASIC3.03□□□□□ -1.92
HLA-DQA1Q5Y7H0 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.03□□□□□ -1.92
HLA-DQA1Q5Y7H0 MIR3199-1-201ENST00000582434 88 ntBASIC3.03□□□□□ -1.92
HLA-DQA1Q5Y7H0 AL031274.2-201ENST00000599419 203 ntBASIC3.03□□□□□ -1.92
HLA-DQA1Q5Y7H0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.03□□□□□ -1.92
HLA-DQA1Q5Y7H0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DQA1Q5Y7H0 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.03□□□□□ -1.92
HLA-DQA1Q5Y7H0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DQA1Q5Y7H0 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DQA1Q5Y7H0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC009487.2-201ENST00000420969 6821 ntBASIC3.02□□□□□ -1.93
HLA-DQA1Q5Y7H0 SNORD46.1-201ENST00000364139 104 ntBASIC3.02□□□□□ -1.93
HLA-DQA1Q5Y7H0 Y_RNA.261-201ENST00000364631 102 ntBASIC3.02□□□□□ -1.93
HLA-DQA1Q5Y7H0 SNORD50B-201ENST00000364995 70 ntBASIC3.02□□□□□ -1.93
HLA-DQA1Q5Y7H0 Y_RNA.542-201ENST00000384641 111 ntBASIC3.02□□□□□ -1.93
HLA-DQA1Q5Y7H0 RNU6-136P-201ENST00000384663 107 ntBASIC3.02□□□□□ -1.93
HLA-DQA1Q5Y7H0 MIR181A2-201ENST00000384863 110 ntBASIC3.02□□□□□ -1.93
HLA-DQA1Q5Y7H0 MIR1278-201ENST00000408753 81 ntBASIC3.02□□□□□ -1.93
HLA-DQA1Q5Y7H0 RNA5SP511-201ENST00000410487 115 ntBASIC3.02□□□□□ -1.93
HLA-DQA1Q5Y7H0 AL135786.1-201ENST00000415892 214 ntBASIC3.02□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC016925.1-201ENST00000458303 298 ntBASIC3.02□□□□□ -1.93
HLA-DQA1Q5Y7H0 RPL23AP54-201ENST00000495129 419 ntBASIC3.02□□□□□ -1.93
HLA-DQA1Q5Y7H0 NDUFB9P3-201ENST00000521269 501 ntBASIC3.02□□□□□ -1.93
HLA-DQA1Q5Y7H0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC127455.1-201ENST00000565496 145 ntBASIC3.02□□□□□ -1.93
HLA-DQA1Q5Y7H0 LARP7P3-201ENST00000579888 337 ntBASIC3.02□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DQA1Q5Y7H0 RMST_8.1-201ENST00000610287 165 ntBASIC3.02□□□□□ -1.93
HLA-DQA1Q5Y7H0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
HLA-DQA1Q5Y7H0 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.02□□□□□ -1.93
HLA-DQA1Q5Y7H0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
HLA-DQA1Q5Y7H0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DQA1Q5Y7H0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
HLA-DQA1Q5Y7H0 RNU1-70P-201ENST00000362618 164 ntBASIC3.01□□□□□ -1.93
HLA-DQA1Q5Y7H0 SNORA38.1-201ENST00000364172 131 ntBASIC3.01□□□□□ -1.93
HLA-DQA1Q5Y7H0 Y_RNA.218-201ENST00000364218 104 ntBASIC3.01□□□□□ -1.93
HLA-DQA1Q5Y7H0 Y_RNA.420-201ENST00000384043 110 ntBASIC3.01□□□□□ -1.93
HLA-DQA1Q5Y7H0 RNU6-768P-201ENST00000384683 107 ntBASIC3.01□□□□□ -1.93
HLA-DQA1Q5Y7H0 RNA5SP120-201ENST00000410900 112 ntBASIC3.01□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DQA1Q5Y7H0 RNU6-1211P-201ENST00000459179 105 ntBASIC3.01□□□□□ -1.93
HLA-DQA1Q5Y7H0 RN7SL807P-201ENST00000470923 297 ntBASIC3.01□□□□□ -1.93
HLA-DQA1Q5Y7H0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.01□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC021205.2-201ENST00000480069 347 ntBASIC3.01□□□□□ -1.93
HLA-DQA1Q5Y7H0 SCARNA3-201ENST00000517097 143 ntBASIC3.01□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.01□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC018630.3-201ENST00000542637 96 ntBASIC3.01□□□□□ -1.93
HLA-DQA1Q5Y7H0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DQA1Q5Y7H0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DQA1Q5Y7H0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.01□□□□□ -1.93
HLA-DQA1Q5Y7H0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DQA1Q5Y7H0 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
HLA-DQA1Q5Y7H0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3□□□□□ -1.93
HLA-DQA1Q5Y7H0 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
HLA-DQA1Q5Y7H0 RNU6-743P-201ENST00000364151 106 ntBASIC3□□□□□ -1.93
HLA-DQA1Q5Y7H0 Y_RNA.521-201ENST00000384560 114 ntBASIC3□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC016909.1-201ENST00000415916 166 ntBASIC3□□□□□ -1.93
HLA-DQA1Q5Y7H0 CYCSP49-201ENST00000420810 319 ntBASIC3□□□□□ -1.93
HLA-DQA1Q5Y7H0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC005326.1-201ENST00000429197 123 ntBASIC3□□□□□ -1.93
HLA-DQA1Q5Y7H0 SNRPGP8-201ENST00000454064 226 ntBASIC3□□□□□ -1.93
HLA-DQA1Q5Y7H0 RNU7-197P-201ENST00000458836 62 ntBASIC3□□□□□ -1.93
HLA-DQA1Q5Y7H0 RNU6-437P-201ENST00000459408 95 ntBASIC3□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC080013.2-201ENST00000460866 323 ntBASIC3□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC010401.1-201ENST00000463867 348 ntBASIC3□□□□□ -1.93
HLA-DQA1Q5Y7H0 RPL36AP21-201ENST00000490372 323 ntBASIC3□□□□□ -1.93
HLA-DQA1Q5Y7H0 MIR6844-201ENST00000637122 62 ntBASIC3□□□□□ -1.93
HLA-DQA1Q5Y7H0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HLA-DQA1Q5Y7H0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DQA1Q5Y7H0 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms