Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.73□□□□□ -1.81
USPL1Q5W0Q7 RNU5F-4P-201ENST00000516581 114 ntBASIC3.73□□□□□ -1.81
USPL1Q5W0Q7 SCARNA11.3-201ENST00000517276 130 ntBASIC3.73□□□□□ -1.81
USPL1Q5W0Q7 AC068657.1-201ENST00000520807 306 ntBASIC3.73□□□□□ -1.81
USPL1Q5W0Q7 AL713866.2-201ENST00000603579 219 ntBASIC3.73□□□□□ -1.81
USPL1Q5W0Q7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
USPL1Q5W0Q7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
USPL1Q5W0Q7 Y_RNA.400-201ENST00000383963 111 ntBASIC3.72□□□□□ -1.81
USPL1Q5W0Q7 RNU6-1081P-201ENST00000384537 107 ntBASIC3.72□□□□□ -1.81
USPL1Q5W0Q7 MIR626-201ENST00000385032 94 ntBASIC3.72□□□□□ -1.81
USPL1Q5W0Q7 RNU1-101P-201ENST00000391171 127 ntBASIC3.72□□□□□ -1.81
USPL1Q5W0Q7 MIR1294-201ENST00000408503 142 ntBASIC3.72□□□□□ -1.81
USPL1Q5W0Q7 AC146507.2-201ENST00000460608 476 ntBASIC3.72□□□□□ -1.81
USPL1Q5W0Q7 AL049830.2-201ENST00000480072 201 ntBASIC3.72□□□□□ -1.81
USPL1Q5W0Q7 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.72□□□□□ -1.81
USPL1Q5W0Q7 Y_RNA.797-201ENST00000515977 94 ntBASIC3.72□□□□□ -1.81
USPL1Q5W0Q7 Y_RNA.802-201ENST00000614892 130 ntBASIC3.72□□□□□ -1.81
USPL1Q5W0Q7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
USPL1Q5W0Q7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
USPL1Q5W0Q7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
USPL1Q5W0Q7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
USPL1Q5W0Q7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
USPL1Q5W0Q7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
USPL1Q5W0Q7 MIR148B-201ENST00000362252 99 ntBASIC3.71□□□□□ -1.82
USPL1Q5W0Q7 RNA5SP432-201ENST00000362480 116 ntBASIC3.71□□□□□ -1.82
USPL1Q5W0Q7 SNORA51.4-201ENST00000364993 124 ntBASIC3.71□□□□□ -1.82
USPL1Q5W0Q7 Y_RNA.310-201ENST00000365063 113 ntBASIC3.71□□□□□ -1.82
USPL1Q5W0Q7 RNU6-144P-201ENST00000383951 107 ntBASIC3.71□□□□□ -1.82
USPL1Q5W0Q7 MIR526A2-201ENST00000390198 65 ntBASIC3.71□□□□□ -1.82
USPL1Q5W0Q7 RPL32P35-201ENST00000415214 394 ntBASIC3.71□□□□□ -1.82
USPL1Q5W0Q7 HMGN2P9-201ENST00000476875 229 ntBASIC3.71□□□□□ -1.82
USPL1Q5W0Q7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.71□□□□□ -1.82
USPL1Q5W0Q7 AC021269.2-201ENST00000532318 330 ntBASIC3.71□□□□□ -1.82
USPL1Q5W0Q7 MIR3186-201ENST00000577404 85 ntBASIC3.71□□□□□ -1.82
USPL1Q5W0Q7 MIR4744-201ENST00000581563 82 ntBASIC3.71□□□□□ -1.82
USPL1Q5W0Q7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
USPL1Q5W0Q7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
USPL1Q5W0Q7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
USPL1Q5W0Q7 AC009487.4-201ENST00000624969 3585 ntBASIC3.71□□□□□ -1.82
USPL1Q5W0Q7 AC134026.1-201ENST00000623249 2239 ntBASIC3.7□□□□□ -1.82
USPL1Q5W0Q7 RNU6-239P-201ENST00000390990 99 ntBASIC3.7□□□□□ -1.82
USPL1Q5W0Q7 MIR1283-1-201ENST00000408494 87 ntBASIC3.7□□□□□ -1.82
USPL1Q5W0Q7 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.7□□□□□ -1.82
USPL1Q5W0Q7 SNORD109B-201ENST00000458961 67 ntBASIC3.7□□□□□ -1.82
USPL1Q5W0Q7 SNORD109A-201ENST00000459128 67 ntBASIC3.7□□□□□ -1.82
USPL1Q5W0Q7 RNU6-1098P-201ENST00000516772 96 ntBASIC3.7□□□□□ -1.82
USPL1Q5W0Q7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.7□□□□□ -1.82
USPL1Q5W0Q7 AC025754.2-201ENST00000606491 432 ntBASIC3.7□□□□□ -1.82
USPL1Q5W0Q7 AC099778.2-201ENST00000610904 211 ntBASIC3.7□□□□□ -1.82
USPL1Q5W0Q7 AC091564.4-201ENST00000533934 2194 ntBASIC3.7□□□□□ -1.82
USPL1Q5W0Q7 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USPL1Q5W0Q7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.7□□□□□ -1.82
USPL1Q5W0Q7 AC096644.4-201ENST00000563417 2912 ntBASIC3.7□□□□□ -1.82
USPL1Q5W0Q7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
USPL1Q5W0Q7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.69□□□□□ -1.82
USPL1Q5W0Q7 RNU6-376P-201ENST00000384731 106 ntBASIC3.69□□□□□ -1.82
USPL1Q5W0Q7 MIR1261-201ENST00000408659 82 ntBASIC3.69□□□□□ -1.82
USPL1Q5W0Q7 SEPT7P4-201ENST00000437076 306 ntBASIC3.69□□□□□ -1.82
USPL1Q5W0Q7 MIR4431-201ENST00000579990 94 ntBASIC3.69□□□□□ -1.82
USPL1Q5W0Q7 MIR4435-1-201ENST00000582552 80 ntBASIC3.69□□□□□ -1.82
USPL1Q5W0Q7 MIR4753-201ENST00000585119 83 ntBASIC3.69□□□□□ -1.82
USPL1Q5W0Q7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.69□□□□□ -1.82
USPL1Q5W0Q7 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.69□□□□□ -1.82
USPL1Q5W0Q7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
USPL1Q5W0Q7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
USPL1Q5W0Q7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.69□□□□□ -1.82
USPL1Q5W0Q7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.69□□□□□ -1.82
USPL1Q5W0Q7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
USPL1Q5W0Q7 Z82209.1-201ENST00000422141 2135 ntBASIC3.68□□□□□ -1.82
USPL1Q5W0Q7 RNU6-271P-201ENST00000363858 105 ntBASIC3.68□□□□□ -1.82
USPL1Q5W0Q7 Y_RNA.293-201ENST00000364908 93 ntBASIC3.68□□□□□ -1.82
USPL1Q5W0Q7 RNU6-1130P-201ENST00000365434 107 ntBASIC3.68□□□□□ -1.82
USPL1Q5W0Q7 Y_RNA.488-201ENST00000384403 102 ntBASIC3.68□□□□□ -1.82
USPL1Q5W0Q7 SNORA46-201ENST00000384762 135 ntBASIC3.68□□□□□ -1.82
USPL1Q5W0Q7 RNU6-578P-201ENST00000390980 103 ntBASIC3.68□□□□□ -1.82
USPL1Q5W0Q7 MIR873-201ENST00000401120 77 ntBASIC3.68□□□□□ -1.82
USPL1Q5W0Q7 AC009414.1-201ENST00000427200 443 ntBASIC3.68□□□□□ -1.82
USPL1Q5W0Q7 MICF-203ENST00000432679 129 ntBASIC3.68□□□□□ -1.82
USPL1Q5W0Q7 HSPE1P13-201ENST00000451143 297 ntBASIC3.68□□□□□ -1.82
USPL1Q5W0Q7 RPS27P29-201ENST00000463110 252 ntBASIC3.68□□□□□ -1.82
USPL1Q5W0Q7 RN7SL330P-201ENST00000469709 307 ntBASIC3.68□□□□□ -1.82
USPL1Q5W0Q7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.68□□□□□ -1.82
USPL1Q5W0Q7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.68□□□□□ -1.82
USPL1Q5W0Q7 AC091544.4-201ENST00000555268 342 ntBASIC3.68□□□□□ -1.82
USPL1Q5W0Q7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.68□□□□□ -1.82
USPL1Q5W0Q7 AC069294.1-201ENST00000608397 350 ntBASIC3.68□□□□□ -1.82
USPL1Q5W0Q7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.68□□□□□ -1.82
USPL1Q5W0Q7 AC090517.3-201ENST00000625170 141 ntBASIC3.68□□□□□ -1.82
USPL1Q5W0Q7 AC110079.1-202ENST00000635213 138 ntBASIC3.68□□□□□ -1.82
USPL1Q5W0Q7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
USPL1Q5W0Q7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
USPL1Q5W0Q7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.67□□□□□ -1.82
USPL1Q5W0Q7 RNU6-1205P-201ENST00000363625 106 ntBASIC3.67□□□□□ -1.82
USPL1Q5W0Q7 RPL21P3-201ENST00000395517 478 ntBASIC3.67□□□□□ -1.82
USPL1Q5W0Q7 ARF4P2-201ENST00000430209 526 ntBASIC3.67□□□□□ -1.82
USPL1Q5W0Q7 CR769767.1-201ENST00000436337 346 ntBASIC3.67□□□□□ -1.82
USPL1Q5W0Q7 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.67□□□□□ -1.82
USPL1Q5W0Q7 AC245166.1-201ENST00000521012 253 ntBASIC3.67□□□□□ -1.82
USPL1Q5W0Q7 AC018630.3-201ENST00000542637 96 ntBASIC3.67□□□□□ -1.82
USPL1Q5W0Q7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms