Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.42□□□□□ -1.86
PCDH1Q08174 AC013412.1-201ENST00000610687 192 ntBASIC3.42□□□□□ -1.86
PCDH1Q08174 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
PCDH1Q08174 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDH1Q08174 Z82209.1-201ENST00000422141 2135 ntBASIC3.41□□□□□ -1.86
PCDH1Q08174 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PCDH1Q08174 RNU6-438P-201ENST00000365561 103 ntBASIC3.41□□□□□ -1.86
PCDH1Q08174 RNU6-1056P-201ENST00000383996 107 ntBASIC3.41□□□□□ -1.86
PCDH1Q08174 Y_RNA.432-201ENST00000384087 111 ntBASIC3.41□□□□□ -1.86
PCDH1Q08174 MIR7-3-201ENST00000384898 110 ntBASIC3.41□□□□□ -1.86
PCDH1Q08174 MIR591-201ENST00000385290 95 ntBASIC3.41□□□□□ -1.86
PCDH1Q08174 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.41□□□□□ -1.86
PCDH1Q08174 RNU2-55P-201ENST00000411146 174 ntBASIC3.41□□□□□ -1.86
PCDH1Q08174 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDH1Q08174 AL357552.1-201ENST00000445254 415 ntBASIC3.41□□□□□ -1.86
PCDH1Q08174 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDH1Q08174 snoU13.22-201ENST00000459428 104 ntBASIC3.41□□□□□ -1.86
PCDH1Q08174 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDH1Q08174 PHBP14-201ENST00000512887 367 ntBASIC3.41□□□□□ -1.86
PCDH1Q08174 RN7SKP179-201ENST00000516126 217 ntBASIC3.41□□□□□ -1.86
PCDH1Q08174 RNU6-197P-201ENST00000516680 100 ntBASIC3.41□□□□□ -1.86
PCDH1Q08174 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDH1Q08174 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
PCDH1Q08174 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
PCDH1Q08174 AL121772.2-201ENST00000614331 297 ntBASIC3.41□□□□□ -1.86
PCDH1Q08174 AC002064.3-201ENST00000623448 346 ntBASIC3.41□□□□□ -1.86
PCDH1Q08174 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDH1Q08174 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDH1Q08174 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PCDH1Q08174 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
PCDH1Q08174 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PCDH1Q08174 Y_RNA.333-201ENST00000365274 102 ntBASIC3.4□□□□□ -1.87
PCDH1Q08174 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PCDH1Q08174 RNU6-1080P-201ENST00000383982 107 ntBASIC3.4□□□□□ -1.87
PCDH1Q08174 SNORA72-201ENST00000384339 132 ntBASIC3.4□□□□□ -1.87
PCDH1Q08174 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PCDH1Q08174 Y_RNA.584-201ENST00000391090 114 ntBASIC3.4□□□□□ -1.87
PCDH1Q08174 AC016909.1-201ENST00000415916 166 ntBASIC3.4□□□□□ -1.87
PCDH1Q08174 AL035423.1-201ENST00000420331 213 ntBASIC3.4□□□□□ -1.87
PCDH1Q08174 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.4□□□□□ -1.87
PCDH1Q08174 RNU7-107P-201ENST00000459121 61 ntBASIC3.4□□□□□ -1.87
PCDH1Q08174 AC080013.2-201ENST00000460866 323 ntBASIC3.4□□□□□ -1.87
PCDH1Q08174 RPS27P22-201ENST00000478056 241 ntBASIC3.4□□□□□ -1.87
PCDH1Q08174 MIR4444-1-201ENST00000581696 74 ntBASIC3.4□□□□□ -1.87
PCDH1Q08174 MIR4444-2-201ENST00000584390 74 ntBASIC3.4□□□□□ -1.87
PCDH1Q08174 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.4□□□□□ -1.87
PCDH1Q08174 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PCDH1Q08174 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PCDH1Q08174 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PCDH1Q08174 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDH1Q08174 RNU6-1240P-201ENST00000365155 104 ntBASIC3.39□□□□□ -1.87
PCDH1Q08174 SNORA70.4-201ENST00000365509 134 ntBASIC3.39□□□□□ -1.87
PCDH1Q08174 RNU6-484P-201ENST00000384016 107 ntBASIC3.39□□□□□ -1.87
PCDH1Q08174 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
PCDH1Q08174 RNU2-52P-201ENST00000410680 190 ntBASIC3.39□□□□□ -1.87
PCDH1Q08174 RPL30P4-201ENST00000429309 333 ntBASIC3.39□□□□□ -1.87
PCDH1Q08174 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.39□□□□□ -1.87
PCDH1Q08174 RNU1-95P-201ENST00000516357 160 ntBASIC3.39□□□□□ -1.87
PCDH1Q08174 RNU2-34P-201ENST00000516534 121 ntBASIC3.39□□□□□ -1.87
PCDH1Q08174 RNU1-128P-201ENST00000516704 160 ntBASIC3.39□□□□□ -1.87
PCDH1Q08174 RNU6-965P-201ENST00000516721 96 ntBASIC3.39□□□□□ -1.87
PCDH1Q08174 AC107934.2-201ENST00000518653 310 ntBASIC3.39□□□□□ -1.87
PCDH1Q08174 AC090049.2-201ENST00000550377 109 ntBASIC3.39□□□□□ -1.87
PCDH1Q08174 AL049861.1-201ENST00000603130 150 ntBASIC3.39□□□□□ -1.87
PCDH1Q08174 MIR7851-201ENST00000610611 160 ntBASIC3.39□□□□□ -1.87
PCDH1Q08174 MIR7153-201ENST00000637758 57 ntBASIC3.39□□□□□ -1.87
PCDH1Q08174 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDH1Q08174 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.39□□□□□ -1.87
PCDH1Q08174 AL021368.2-201ENST00000606125 5352 ntBASIC3.38□□□□□ -1.87
PCDH1Q08174 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDH1Q08174 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDH1Q08174 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PCDH1Q08174 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.38□□□□□ -1.87
PCDH1Q08174 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
PCDH1Q08174 DYNLT3P1-201ENST00000378574 347 ntBASIC3.38□□□□□ -1.87
PCDH1Q08174 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PCDH1Q08174 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.38□□□□□ -1.87
PCDH1Q08174 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.38□□□□□ -1.87
PCDH1Q08174 RPS12P18-201ENST00000442381 270 ntBASIC3.38□□□□□ -1.87
PCDH1Q08174 RAC1P5-201ENST00000512182 576 ntBASIC3.38□□□□□ -1.87
PCDH1Q08174 RN7SKP18-201ENST00000516005 275 ntBASIC3.38□□□□□ -1.87
PCDH1Q08174 RNU6-1299P-201ENST00000516316 100 ntBASIC3.38□□□□□ -1.87
PCDH1Q08174 SNORA70.19-201ENST00000516717 90 ntBASIC3.38□□□□□ -1.87
PCDH1Q08174 SNORD59.2-201ENST00000516873 68 ntBASIC3.38□□□□□ -1.87
PCDH1Q08174 AL160236.1-201ENST00000556317 195 ntBASIC3.38□□□□□ -1.87
PCDH1Q08174 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.38□□□□□ -1.87
PCDH1Q08174 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDH1Q08174 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
PCDH1Q08174 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDH1Q08174 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDH1Q08174 SNORA25.7-201ENST00000364375 127 ntBASIC3.37□□□□□ -1.87
PCDH1Q08174 RNU6-153P-201ENST00000364422 104 ntBASIC3.37□□□□□ -1.87
PCDH1Q08174 RNU6-1336P-201ENST00000383886 109 ntBASIC3.37□□□□□ -1.87
PCDH1Q08174 RNU6-136P-201ENST00000384663 107 ntBASIC3.37□□□□□ -1.87
PCDH1Q08174 MICF-203ENST00000432679 129 ntBASIC3.37□□□□□ -1.87
PCDH1Q08174 HMGN2P18-201ENST00000450680 270 ntBASIC3.37□□□□□ -1.87
PCDH1Q08174 AC010401.1-201ENST00000463867 348 ntBASIC3.37□□□□□ -1.87
PCDH1Q08174 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDH1Q08174 AL929325.1-201ENST00000603096 117 ntBASIC3.37□□□□□ -1.87
PCDH1Q08174 SNORA51-201ENST00000606420 132 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms