Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 MIR34B-201ENST00000385076 84 ntBASIC3.22□□□□□ -1.89
PMS1P54277 FO393413.1-201ENST00000402892 195 ntBASIC3.22□□□□□ -1.89
PMS1P54277 RN7SKP27-201ENST00000410684 333 ntBASIC3.22□□□□□ -1.89
PMS1P54277 RNU6-57P-201ENST00000411348 103 ntBASIC3.22□□□□□ -1.89
PMS1P54277 AL451074.5-201ENST00000415894 435 ntBASIC3.22□□□□□ -1.89
PMS1P54277 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.22□□□□□ -1.89
PMS1P54277 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.22□□□□□ -1.89
PMS1P54277 MIR3144-201ENST00000579460 79 ntBASIC3.22□□□□□ -1.89
PMS1P54277 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.22□□□□□ -1.89
PMS1P54277 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PMS1P54277 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PMS1P54277 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
PMS1P54277 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PMS1P54277 AC080128.1-201ENST00000474389 1917 ntBASIC3.21□□□□□ -1.9
PMS1P54277 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
PMS1P54277 Y_RNA.121-201ENST00000363309 113 ntBASIC3.21□□□□□ -1.9
PMS1P54277 Y_RNA.182-201ENST00000363880 111 ntBASIC3.21□□□□□ -1.9
PMS1P54277 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
PMS1P54277 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
PMS1P54277 MIR873-201ENST00000401120 77 ntBASIC3.21□□□□□ -1.9
PMS1P54277 AC104332.2-201ENST00000429959 156 ntBASIC3.21□□□□□ -1.9
PMS1P54277 Z96811.1-201ENST00000445880 108 ntBASIC3.21□□□□□ -1.9
PMS1P54277 AC016717.1-201ENST00000448918 286 ntBASIC3.21□□□□□ -1.9
PMS1P54277 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.21□□□□□ -1.9
PMS1P54277 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.21□□□□□ -1.9
PMS1P54277 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.21□□□□□ -1.9
PMS1P54277 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.21□□□□□ -1.9
PMS1P54277 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PMS1P54277 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.21□□□□□ -1.9
PMS1P54277 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PMS1P54277 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PMS1P54277 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PMS1P54277 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PMS1P54277 SNORD114-7-201ENST00000362520 77 ntBASIC3.2□□□□□ -1.9
PMS1P54277 Y_RNA.124-201ENST00000363339 93 ntBASIC3.2□□□□□ -1.9
PMS1P54277 SNORA71.1-201ENST00000364523 117 ntBASIC3.2□□□□□ -1.9
PMS1P54277 RNU6-546P-201ENST00000383991 107 ntBASIC3.2□□□□□ -1.9
PMS1P54277 SNORA20B-201ENST00000384220 132 ntBASIC3.2□□□□□ -1.9
PMS1P54277 SNORA8.3-201ENST00000384679 139 ntBASIC3.2□□□□□ -1.9
PMS1P54277 SNORA48.5-201ENST00000391143 135 ntBASIC3.2□□□□□ -1.9
PMS1P54277 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.2□□□□□ -1.9
PMS1P54277 AL355497.1-201ENST00000406262 551 ntBASIC3.2□□□□□ -1.9
PMS1P54277 RNU6-394P-201ENST00000410735 107 ntBASIC3.2□□□□□ -1.9
PMS1P54277 RNU6-221P-201ENST00000459541 99 ntBASIC3.2□□□□□ -1.9
PMS1P54277 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.2□□□□□ -1.9
PMS1P54277 AC023141.11-201ENST00000508864 202 ntBASIC3.2□□□□□ -1.9
PMS1P54277 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.2□□□□□ -1.9
PMS1P54277 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.2□□□□□ -1.9
PMS1P54277 U2.22-201ENST00000636441 106 ntBASIC3.2□□□□□ -1.9
PMS1P54277 AC138915.1-201ENST00000565427 1685 ntBASIC3.2□□□□□ -1.9
PMS1P54277 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.2□□□□□ -1.9
PMS1P54277 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.2□□□□□ -1.9
PMS1P54277 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PMS1P54277 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.19□□□□□ -1.9
PMS1P54277 RNU6-271P-201ENST00000363858 105 ntBASIC3.19□□□□□ -1.9
PMS1P54277 Y_RNA.441-201ENST00000384123 112 ntBASIC3.19□□□□□ -1.9
PMS1P54277 AL355796.1-201ENST00000406706 323 ntBASIC3.19□□□□□ -1.9
PMS1P54277 RNU6-1135P-201ENST00000411083 103 ntBASIC3.19□□□□□ -1.9
PMS1P54277 RNU2-32P-201ENST00000411193 191 ntBASIC3.19□□□□□ -1.9
PMS1P54277 AL513477.1-202ENST00000417061 214 ntBASIC3.19□□□□□ -1.9
PMS1P54277 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.19□□□□□ -1.9
PMS1P54277 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.19□□□□□ -1.9
PMS1P54277 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.19□□□□□ -1.9
PMS1P54277 AL121890.1-201ENST00000435457 205 ntBASIC3.19□□□□□ -1.9
PMS1P54277 UBBP3-201ENST00000445497 241 ntBASIC3.19□□□□□ -1.9
PMS1P54277 RPL23AP7-203ENST00000449021 469 ntBASIC3.19□□□□□ -1.9
PMS1P54277 CYP2C59P-201ENST00000457790 269 ntBASIC3.19□□□□□ -1.9
PMS1P54277 AC016925.1-201ENST00000458303 298 ntBASIC3.19□□□□□ -1.9
PMS1P54277 RNU7-141P-201ENST00000459304 62 ntBASIC3.19□□□□□ -1.9
PMS1P54277 AC080013.2-201ENST00000460866 323 ntBASIC3.19□□□□□ -1.9
PMS1P54277 RNU6-948P-201ENST00000516374 107 ntBASIC3.19□□□□□ -1.9
PMS1P54277 AC021269.2-201ENST00000532318 330 ntBASIC3.19□□□□□ -1.9
PMS1P54277 MIR3910-1-201ENST00000580936 111 ntBASIC3.19□□□□□ -1.9
PMS1P54277 AC108706.1-201ENST00000611053 297 ntBASIC3.19□□□□□ -1.9
PMS1P54277 AC091953.5-201ENST00000622919 233 ntBASIC3.19□□□□□ -1.9
PMS1P54277 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.19□□□□□ -1.9
PMS1P54277 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PMS1P54277 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.19□□□□□ -1.9
PMS1P54277 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PMS1P54277 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
PMS1P54277 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.19□□□□□ -1.9
PMS1P54277 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
PMS1P54277 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PMS1P54277 RNU6-1205P-201ENST00000363625 106 ntBASIC3.18□□□□□ -1.9
PMS1P54277 RNY1P5-201ENST00000383890 115 ntBASIC3.18□□□□□ -1.9
PMS1P54277 Y_RNA.398-201ENST00000383952 99 ntBASIC3.18□□□□□ -1.9
PMS1P54277 RNU6-381P-201ENST00000391259 108 ntBASIC3.18□□□□□ -1.9
PMS1P54277 AL590004.2-201ENST00000404787 371 ntBASIC3.18□□□□□ -1.9
PMS1P54277 HSPE1P21-201ENST00000438283 308 ntBASIC3.18□□□□□ -1.9
PMS1P54277 AL161788.1-201ENST00000441805 169 ntBASIC3.18□□□□□ -1.9
PMS1P54277 RPS27AP9-201ENST00000477681 438 ntBASIC3.18□□□□□ -1.9
PMS1P54277 AC092185.1-201ENST00000491371 97 ntBASIC3.18□□□□□ -1.9
PMS1P54277 AC010598.1-201ENST00000510378 103 ntBASIC3.18□□□□□ -1.9
PMS1P54277 Y_RNA.797-201ENST00000515977 94 ntBASIC3.18□□□□□ -1.9
PMS1P54277 RN7SKP164-201ENST00000516138 266 ntBASIC3.18□□□□□ -1.9
PMS1P54277 RNA5SP490-201ENST00000517141 136 ntBASIC3.18□□□□□ -1.9
PMS1P54277 MTND5P41-201ENST00000517498 206 ntBASIC3.18□□□□□ -1.9
PMS1P54277 AC027419.1-201ENST00000522976 328 ntBASIC3.18□□□□□ -1.9
PMS1P54277 AC022616.8-201ENST00000533569 253 ntBASIC3.18□□□□□ -1.9
PMS1P54277 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 828.2 ms