Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 Y_RNA.136-201ENST00000363444 102 ntBASIC2.28□□□□□ -2.04
SOX2P48431 RNU6-1235P-201ENST00000384559 107 ntBASIC2.28□□□□□ -2.04
SOX2P48431 U3.40-201ENST00000408706 208 ntBASIC2.28□□□□□ -2.04
SOX2P48431 RNU6-847P-201ENST00000411115 108 ntBASIC2.28□□□□□ -2.04
SOX2P48431 RNU6-57P-201ENST00000411348 103 ntBASIC2.28□□□□□ -2.04
SOX2P48431 AL139132.1-201ENST00000431587 344 ntBASIC2.28□□□□□ -2.04
SOX2P48431 AC016717.1-201ENST00000448918 286 ntBASIC2.28□□□□□ -2.04
SOX2P48431 RNU6-498P-201ENST00000459468 107 ntBASIC2.28□□□□□ -2.04
SOX2P48431 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.28□□□□□ -2.04
SOX2P48431 AC093259.1-201ENST00000509755 300 ntBASIC2.28□□□□□ -2.04
SOX2P48431 MTND1P19-201ENST00000511780 315 ntBASIC2.28□□□□□ -2.04
SOX2P48431 RNU2-34P-201ENST00000516534 121 ntBASIC2.28□□□□□ -2.04
SOX2P48431 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.28□□□□□ -2.04
SOX2P48431 AC025754.2-201ENST00000606491 432 ntBASIC2.28□□□□□ -2.04
SOX2P48431 AC090425.1-201ENST00000610007 140 ntBASIC2.28□□□□□ -2.04
SOX2P48431 AC096577.2-201ENST00000611455 153 ntBASIC2.28□□□□□ -2.04
SOX2P48431 U2.14-201ENST00000615943 113 ntBASIC2.28□□□□□ -2.04
SOX2P48431 FO624990.1-201ENST00000636373 85 ntBASIC2.28□□□□□ -2.04
SOX2P48431 AC073346.2-201ENST00000624724 2058 ntBASIC2.28□□□□□ -2.04
SOX2P48431 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SOX2P48431 RNU6-1266P-201ENST00000362794 105 ntBASIC2.27□□□□□ -2.05
SOX2P48431 Y_RNA.243-201ENST00000364481 109 ntBASIC2.27□□□□□ -2.05
SOX2P48431 Y_RNA.332-201ENST00000365271 113 ntBASIC2.27□□□□□ -2.05
SOX2P48431 Y_RNA.418-201ENST00000384029 102 ntBASIC2.27□□□□□ -2.05
SOX2P48431 RNU6-418P-201ENST00000384035 107 ntBASIC2.27□□□□□ -2.05
SOX2P48431 RNU1-138P-201ENST00000384093 164 ntBASIC2.27□□□□□ -2.05
SOX2P48431 SNORD14D-201ENST00000384390 87 ntBASIC2.27□□□□□ -2.05
SOX2P48431 RNU6-1072P-201ENST00000384703 107 ntBASIC2.27□□□□□ -2.05
SOX2P48431 RNU6-443P-201ENST00000384780 107 ntBASIC2.27□□□□□ -2.05
SOX2P48431 MIR491-201ENST00000384877 84 ntBASIC2.27□□□□□ -2.05
SOX2P48431 AL603910.2-201ENST00000407268 136 ntBASIC2.27□□□□□ -2.05
SOX2P48431 AC123900.1-201ENST00000420390 96 ntBASIC2.27□□□□□ -2.05
SOX2P48431 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.27□□□□□ -2.05
SOX2P48431 AC024067.1-201ENST00000426199 223 ntBASIC2.27□□□□□ -2.05
SOX2P48431 AC087499.2-201ENST00000432861 149 ntBASIC2.27□□□□□ -2.05
SOX2P48431 SUMO1P2-201ENST00000452524 304 ntBASIC2.27□□□□□ -2.05
SOX2P48431 RNU6-221P-201ENST00000459541 99 ntBASIC2.27□□□□□ -2.05
SOX2P48431 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.27□□□□□ -2.05
SOX2P48431 RNA5SP367-201ENST00000516557 118 ntBASIC2.27□□□□□ -2.05
SOX2P48431 RNU6-388P-201ENST00000517012 105 ntBASIC2.27□□□□□ -2.05
SOX2P48431 RNU6-389P-201ENST00000517048 105 ntBASIC2.27□□□□□ -2.05
SOX2P48431 RNU1-104P-201ENST00000517280 175 ntBASIC2.27□□□□□ -2.05
SOX2P48431 MIR4658-201ENST00000584344 65 ntBASIC2.27□□□□□ -2.05
SOX2P48431 AC005357.1-201ENST00000588399 301 ntBASIC2.27□□□□□ -2.05
SOX2P48431 AC013412.1-201ENST00000610687 192 ntBASIC2.27□□□□□ -2.05
SOX2P48431 MIR8057-201ENST00000620957 69 ntBASIC2.27□□□□□ -2.05
SOX2P48431 U6.115-201ENST00000636045 103 ntBASIC2.27□□□□□ -2.05
SOX2P48431 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.27□□□□□ -2.05
SOX2P48431 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SOX2P48431 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.26□□□□□ -2.05
SOX2P48431 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SOX2P48431 Y_RNA.20-201ENST00000362479 113 ntBASIC2.26□□□□□ -2.05
SOX2P48431 Y_RNA.44-201ENST00000362676 108 ntBASIC2.26□□□□□ -2.05
SOX2P48431 SNORD27-201ENST00000363981 72 ntBASIC2.26□□□□□ -2.05
SOX2P48431 SNORD115-30-201ENST00000364117 82 ntBASIC2.26□□□□□ -2.05
SOX2P48431 SNORA67.1-201ENST00000364749 141 ntBASIC2.26□□□□□ -2.05
SOX2P48431 RNU6-1318P-201ENST00000365389 103 ntBASIC2.26□□□□□ -2.05
SOX2P48431 Y_RNA.552-201ENST00000384665 112 ntBASIC2.26□□□□□ -2.05
SOX2P48431 MIR634-201ENST00000385208 97 ntBASIC2.26□□□□□ -2.05
SOX2P48431 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
SOX2P48431 AL031003.1-201ENST00000404229 172 ntBASIC2.26□□□□□ -2.05
SOX2P48431 RNA5SP181-201ENST00000410246 98 ntBASIC2.26□□□□□ -2.05
SOX2P48431 RNA5SP21-201ENST00000410917 96 ntBASIC2.26□□□□□ -2.05
SOX2P48431 MTCO1P5-201ENST00000433573 344 ntBASIC2.26□□□□□ -2.05
SOX2P48431 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.26□□□□□ -2.05
SOX2P48431 RNU7-26P-201ENST00000458980 63 ntBASIC2.26□□□□□ -2.05
SOX2P48431 RNU6-436P-201ENST00000516171 114 ntBASIC2.26□□□□□ -2.05
SOX2P48431 NDUFA5P6-201ENST00000542110 379 ntBASIC2.26□□□□□ -2.05
SOX2P48431 AL512605.2-201ENST00000592972 256 ntBASIC2.26□□□□□ -2.05
SOX2P48431 DEFB117-201ENST00000602356 141 ntBASIC2.26□□□□□ -2.05
SOX2P48431 AL049779.4-201ENST00000604500 156 ntBASIC2.26□□□□□ -2.05
SOX2P48431 AC010900.2-201ENST00000604508 210 ntBASIC2.26□□□□□ -2.05
SOX2P48431 AL161756.2-201ENST00000604597 246 ntBASIC2.26□□□□□ -2.05
SOX2P48431 BX284668.6-201ENST00000606899 438 ntBASIC2.26□□□□□ -2.05
SOX2P48431 AC010297.1-201ENST00000623948 149 ntBASIC2.26□□□□□ -2.05
SOX2P48431 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.26□□□□□ -2.05
SOX2P48431 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
SOX2P48431 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.25□□□□□ -2.05
SOX2P48431 MIR6073-201ENST00000352083 89 ntBASIC2.25□□□□□ -2.05
SOX2P48431 Y_RNA.329-201ENST00000365209 107 ntBASIC2.25□□□□□ -2.05
SOX2P48431 RNU6-1248P-201ENST00000391096 64 ntBASIC2.25□□□□□ -2.05
SOX2P48431 AC007064.1-201ENST00000412238 351 ntBASIC2.25□□□□□ -2.05
SOX2P48431 SRIP3-201ENST00000413200 219 ntBASIC2.25□□□□□ -2.05
SOX2P48431 AC008134.1-201ENST00000420943 193 ntBASIC2.25□□□□□ -2.05
SOX2P48431 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.25□□□□□ -2.05
SOX2P48431 AC108059.2-201ENST00000434626 151 ntBASIC2.25□□□□□ -2.05
SOX2P48431 AL357134.1-201ENST00000445848 426 ntBASIC2.25□□□□□ -2.05
SOX2P48431 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.25□□□□□ -2.05
SOX2P48431 PRELID3BP1-201ENST00000457142 540 ntBASIC2.25□□□□□ -2.05
SOX2P48431 AC010531.2-201ENST00000465012 153 ntBASIC2.25□□□□□ -2.05
SOX2P48431 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SOX2P48431 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.25□□□□□ -2.05
SOX2P48431 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.25□□□□□ -2.05
SOX2P48431 AC079600.2-201ENST00000550076 130 ntBASIC2.25□□□□□ -2.05
SOX2P48431 MIR3145-201ENST00000580727 82 ntBASIC2.25□□□□□ -2.05
SOX2P48431 MIR5092-201ENST00000583139 88 ntBASIC2.25□□□□□ -2.05
SOX2P48431 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.25□□□□□ -2.05
SOX2P48431 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
SOX2P48431 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.25□□□□□ -2.05
SOX2P48431 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms