Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
XPAP23025 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.83□□□□□ -1.96
XPAP23025 RNU6-743P-201ENST00000364151 106 ntBASIC2.83□□□□□ -1.96
XPAP23025 SNORD14D-201ENST00000384390 87 ntBASIC2.83□□□□□ -1.96
XPAP23025 MIR95-201ENST00000385072 81 ntBASIC2.83□□□□□ -1.96
XPAP23025 AL161788.1-201ENST00000441805 169 ntBASIC2.83□□□□□ -1.96
XPAP23025 AC016717.1-201ENST00000448918 286 ntBASIC2.83□□□□□ -1.96
XPAP23025 NDUFB4P10-201ENST00000452541 359 ntBASIC2.83□□□□□ -1.96
XPAP23025 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
XPAP23025 ZNF861P-201ENST00000588126 639 ntBASIC2.83□□□□□ -1.96
XPAP23025 AL512605.2-201ENST00000592972 256 ntBASIC2.83□□□□□ -1.96
XPAP23025 AC011921.3-201ENST00000605540 361 ntBASIC2.83□□□□□ -1.96
XPAP23025 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
XPAP23025 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.82□□□□□ -1.96
XPAP23025 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
XPAP23025 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
XPAP23025 Y_RNA.200-201ENST00000364018 102 ntBASIC2.82□□□□□ -1.96
XPAP23025 Y_RNA.217-201ENST00000364214 105 ntBASIC2.82□□□□□ -1.96
XPAP23025 Y_RNA.243-201ENST00000364481 109 ntBASIC2.82□□□□□ -1.96
XPAP23025 Y_RNA.297-201ENST00000364950 91 ntBASIC2.82□□□□□ -1.96
XPAP23025 RNU6-546P-201ENST00000383991 107 ntBASIC2.82□□□□□ -1.96
XPAP23025 AL031003.1-201ENST00000404229 172 ntBASIC2.82□□□□□ -1.96
XPAP23025 MIR1185-2-201ENST00000408687 86 ntBASIC2.82□□□□□ -1.96
XPAP23025 AL135790.2-201ENST00000437701 267 ntBASIC2.82□□□□□ -1.96
XPAP23025 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.82□□□□□ -1.96
XPAP23025 HMGN2P18-201ENST00000450680 270 ntBASIC2.82□□□□□ -1.96
XPAP23025 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.82□□□□□ -1.96
XPAP23025 Y_RNA.641-201ENST00000459414 105 ntBASIC2.82□□□□□ -1.96
XPAP23025 PRELID2P1-201ENST00000552837 301 ntBASIC2.82□□□□□ -1.96
XPAP23025 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.82□□□□□ -1.96
XPAP23025 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
XPAP23025 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
XPAP23025 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.81□□□□□ -1.96
XPAP23025 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
XPAP23025 Y_RNA.292-201ENST00000364904 97 ntBASIC2.81□□□□□ -1.96
XPAP23025 SNORD31B-201ENST00000364977 69 ntBASIC2.81□□□□□ -1.96
XPAP23025 RNU6-1072P-201ENST00000384703 107 ntBASIC2.81□□□□□ -1.96
XPAP23025 RNU6-443P-201ENST00000384780 107 ntBASIC2.81□□□□□ -1.96
XPAP23025 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.81□□□□□ -1.96
XPAP23025 Y_RNA.590-201ENST00000410140 107 ntBASIC2.81□□□□□ -1.96
XPAP23025 RNU2-48P-201ENST00000410694 191 ntBASIC2.81□□□□□ -1.96
XPAP23025 RNU2-61P-201ENST00000411069 191 ntBASIC2.81□□□□□ -1.96
XPAP23025 HMGN2P35-201ENST00000412164 270 ntBASIC2.81□□□□□ -1.96
XPAP23025 SUMO1P4-201ENST00000429430 302 ntBASIC2.81□□□□□ -1.96
XPAP23025 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.81□□□□□ -1.96
XPAP23025 RNU7-57P-201ENST00000459540 60 ntBASIC2.81□□□□□ -1.96
XPAP23025 RN7SL499P-201ENST00000481141 276 ntBASIC2.81□□□□□ -1.96
XPAP23025 CKS1BP2-201ENST00000497342 240 ntBASIC2.81□□□□□ -1.96
XPAP23025 AC022616.8-201ENST00000533569 253 ntBASIC2.81□□□□□ -1.96
XPAP23025 MIR4282-201ENST00000583613 67 ntBASIC2.81□□□□□ -1.96
XPAP23025 MIR4753-201ENST00000585119 83 ntBASIC2.81□□□□□ -1.96
XPAP23025 AL355596.1-201ENST00000565399 3996 ntBASIC2.8□□□□□ -1.96
XPAP23025 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
XPAP23025 Y_RNA.111-201ENST00000363248 100 ntBASIC2.8□□□□□ -1.96
XPAP23025 RNA5SP125-201ENST00000364843 120 ntBASIC2.8□□□□□ -1.96
XPAP23025 RNY4P28-201ENST00000365281 93 ntBASIC2.8□□□□□ -1.96
XPAP23025 RNU6-418P-201ENST00000384035 107 ntBASIC2.8□□□□□ -1.96
XPAP23025 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
XPAP23025 MIR300-201ENST00000401138 83 ntBASIC2.8□□□□□ -1.96
XPAP23025 Y_RNA.626-201ENST00000411288 95 ntBASIC2.8□□□□□ -1.96
XPAP23025 AC009310.1-201ENST00000414414 451 ntBASIC2.8□□□□□ -1.96
XPAP23025 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.8□□□□□ -1.96
XPAP23025 AP004217.1-201ENST00000480579 346 ntBASIC2.8□□□□□ -1.96
XPAP23025 Y_RNA.679-201ENST00000516416 91 ntBASIC2.8□□□□□ -1.96
XPAP23025 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.8□□□□□ -1.96
XPAP23025 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.8□□□□□ -1.96
XPAP23025 AC090115.4-201ENST00000609970 188 ntBASIC2.8□□□□□ -1.96
XPAP23025 snoU18.1-201ENST00000629629 71 ntBASIC2.8□□□□□ -1.96
XPAP23025 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
XPAP23025 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
XPAP23025 MIR26A1-201ENST00000362205 77 ntBASIC2.79□□□□□ -1.96
XPAP23025 Y_RNA.82-201ENST00000363000 102 ntBASIC2.79□□□□□ -1.96
XPAP23025 Y_RNA.83-201ENST00000363005 113 ntBASIC2.79□□□□□ -1.96
XPAP23025 Y_RNA.92-201ENST00000363043 102 ntBASIC2.79□□□□□ -1.96
XPAP23025 Y_RNA.199-201ENST00000364014 102 ntBASIC2.79□□□□□ -1.96
XPAP23025 Y_RNA.235-201ENST00000364412 102 ntBASIC2.79□□□□□ -1.96
XPAP23025 Y_RNA.306-201ENST00000365015 102 ntBASIC2.79□□□□□ -1.96
XPAP23025 Y_RNA.312-201ENST00000365089 102 ntBASIC2.79□□□□□ -1.96
XPAP23025 Y_RNA.322-201ENST00000365151 102 ntBASIC2.79□□□□□ -1.96
XPAP23025 AL138827.1-201ENST00000402666 306 ntBASIC2.79□□□□□ -1.96
XPAP23025 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.79□□□□□ -1.96
XPAP23025 RNU2-63P-201ENST00000410792 194 ntBASIC2.79□□□□□ -1.96
XPAP23025 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.79□□□□□ -1.96
XPAP23025 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.79□□□□□ -1.96
XPAP23025 Y_RNA.650-201ENST00000459002 102 ntBASIC2.79□□□□□ -1.96
XPAP23025 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.79□□□□□ -1.96
XPAP23025 Y_RNA.777-201ENST00000516982 102 ntBASIC2.79□□□□□ -1.96
XPAP23025 SNORA81.3-201ENST00000517283 198 ntBASIC2.79□□□□□ -1.96
XPAP23025 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.79□□□□□ -1.96
XPAP23025 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.79□□□□□ -1.96
XPAP23025 Y_RNA.771-201ENST00000598668 102 ntBASIC2.79□□□□□ -1.96
XPAP23025 AL033523.1-201ENST00000605153 153 ntBASIC2.79□□□□□ -1.96
XPAP23025 Y_RNA.789-201ENST00000622480 102 ntBASIC2.79□□□□□ -1.96
XPAP23025 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
XPAP23025 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.79□□□□□ -1.96
XPAP23025 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
XPAP23025 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
XPAP23025 Y_RNA.785-201ENST00000384290 109 ntBASIC2.78□□□□□ -1.96
XPAP23025 RNU6-975P-201ENST00000384296 105 ntBASIC2.78□□□□□ -1.96
XPAP23025 AL451074.5-201ENST00000415894 435 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms