Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 RNU1-96P-201ENST00000364163 162 ntBASIC2.96□□□□□ -1.94
ATF4P18848 RNA5SP283-201ENST00000365604 119 ntBASIC2.96□□□□□ -1.94
ATF4P18848 RNA5SP511-201ENST00000410487 115 ntBASIC2.96□□□□□ -1.94
ATF4P18848 AL135786.1-201ENST00000415892 214 ntBASIC2.96□□□□□ -1.94
ATF4P18848 CST2P1-201ENST00000425770 87 ntBASIC2.96□□□□□ -1.94
ATF4P18848 AL049873.1-201ENST00000480540 376 ntBASIC2.96□□□□□ -1.94
ATF4P18848 AP002392.1-201ENST00000537692 208 ntBASIC2.96□□□□□ -1.94
ATF4P18848 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.96□□□□□ -1.94
ATF4P18848 AC034105.4-201ENST00000568304 277 ntBASIC2.96□□□□□ -1.94
ATF4P18848 MIR3169-201ENST00000578032 83 ntBASIC2.96□□□□□ -1.94
ATF4P18848 AP003357.1-201ENST00000604497 148 ntBASIC2.96□□□□□ -1.94
ATF4P18848 AC004792.1-201ENST00000614523 137 ntBASIC2.96□□□□□ -1.94
ATF4P18848 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
ATF4P18848 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.95□□□□□ -1.94
ATF4P18848 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
ATF4P18848 MIR372-201ENST00000362225 67 ntBASIC2.95□□□□□ -1.94
ATF4P18848 VTRNA1-1-201ENST00000363120 99 ntBASIC2.95□□□□□ -1.94
ATF4P18848 U8.7-201ENST00000364940 136 ntBASIC2.95□□□□□ -1.94
ATF4P18848 SNORA8.3-201ENST00000384679 139 ntBASIC2.95□□□□□ -1.94
ATF4P18848 MIR23B-201ENST00000384832 97 ntBASIC2.95□□□□□ -1.94
ATF4P18848 RNA5SP270-201ENST00000411361 118 ntBASIC2.95□□□□□ -1.94
ATF4P18848 PIGPP3-201ENST00000425307 415 ntBASIC2.95□□□□□ -1.94
ATF4P18848 AC109925.1-201ENST00000478069 331 ntBASIC2.95□□□□□ -1.94
ATF4P18848 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.95□□□□□ -1.94
ATF4P18848 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.95□□□□□ -1.94
ATF4P18848 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.95□□□□□ -1.94
ATF4P18848 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.95□□□□□ -1.94
ATF4P18848 CBX3P4-201ENST00000538909 354 ntBASIC2.95□□□□□ -1.94
ATF4P18848 AC005786.1-201ENST00000588553 154 ntBASIC2.95□□□□□ -1.94
ATF4P18848 Y_RNA.802-201ENST00000614892 130 ntBASIC2.95□□□□□ -1.94
ATF4P18848 MIR6075-201ENST00000620782 95 ntBASIC2.95□□□□□ -1.94
ATF4P18848 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
ATF4P18848 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
ATF4P18848 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.95□□□□□ -1.94
ATF4P18848 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
ATF4P18848 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
ATF4P18848 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
ATF4P18848 AC009487.2-201ENST00000420969 6821 ntBASIC2.94□□□□□ -1.94
ATF4P18848 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
ATF4P18848 AC108206.1-201ENST00000570186 4159 ntBASIC2.94□□□□□ -1.94
ATF4P18848 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
ATF4P18848 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.94□□□□□ -1.94
ATF4P18848 RNU6-136P-201ENST00000384663 107 ntBASIC2.94□□□□□ -1.94
ATF4P18848 RNA5SP467-201ENST00000391274 118 ntBASIC2.94□□□□□ -1.94
ATF4P18848 SNORA36B-201ENST00000410438 131 ntBASIC2.94□□□□□ -1.94
ATF4P18848 RN7SL499P-201ENST00000481141 276 ntBASIC2.94□□□□□ -1.94
ATF4P18848 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.94□□□□□ -1.94
ATF4P18848 RNA5SP164-201ENST00000516533 110 ntBASIC2.94□□□□□ -1.94
ATF4P18848 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.94□□□□□ -1.94
ATF4P18848 AC024995.1-201ENST00000523014 93 ntBASIC2.94□□□□□ -1.94
ATF4P18848 CYCSP30-201ENST00000546447 172 ntBASIC2.94□□□□□ -1.94
ATF4P18848 AC015720.1-201ENST00000565251 277 ntBASIC2.94□□□□□ -1.94
ATF4P18848 MIR5688-201ENST00000580619 83 ntBASIC2.94□□□□□ -1.94
ATF4P18848 AC008739.3-201ENST00000603262 127 ntBASIC2.94□□□□□ -1.94
ATF4P18848 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.94□□□□□ -1.94
ATF4P18848 AC093831.2-201ENST00000624393 3427 ntBASIC2.94□□□□□ -1.94
ATF4P18848 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
ATF4P18848 AL161431.1-201ENST00000618966 4205 ntBASIC2.93□□□□□ -1.94
ATF4P18848 RNU6-653P-201ENST00000363074 106 ntBASIC2.93□□□□□ -1.94
ATF4P18848 RNU6-923P-201ENST00000364753 107 ntBASIC2.93□□□□□ -1.94
ATF4P18848 MIR520G-201ENST00000385064 90 ntBASIC2.93□□□□□ -1.94
ATF4P18848 MT-TR-201ENST00000387439 65 ntBASIC2.93□□□□□ -1.94
ATF4P18848 RNU11-3P-201ENST00000391111 133 ntBASIC2.93□□□□□ -1.94
ATF4P18848 PTMAP2-201ENST00000397627 327 ntBASIC2.93□□□□□ -1.94
ATF4P18848 AC009310.1-201ENST00000414414 451 ntBASIC2.93□□□□□ -1.94
ATF4P18848 SNORA84-201ENST00000459229 133 ntBASIC2.93□□□□□ -1.94
ATF4P18848 RN7SL75P-201ENST00000461926 281 ntBASIC2.93□□□□□ -1.94
ATF4P18848 RPL23AP54-201ENST00000495129 419 ntBASIC2.93□□□□□ -1.94
ATF4P18848 HMGB3P3-201ENST00000510526 400 ntBASIC2.93□□□□□ -1.94
ATF4P18848 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.93□□□□□ -1.94
ATF4P18848 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.93□□□□□ -1.94
ATF4P18848 MIR3158-1-201ENST00000583596 81 ntBASIC2.93□□□□□ -1.94
ATF4P18848 AC073413.2-201ENST00000604332 360 ntBASIC2.93□□□□□ -1.94
ATF4P18848 AL137849.1-201ENST00000604767 169 ntBASIC2.93□□□□□ -1.94
ATF4P18848 MIR6875-201ENST00000617506 72 ntBASIC2.93□□□□□ -1.94
ATF4P18848 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC2.93□□□□□ -1.94
ATF4P18848 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
ATF4P18848 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.93□□□□□ -1.94
ATF4P18848 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
ATF4P18848 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ATF4P18848 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.92□□□□□ -1.94
ATF4P18848 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
ATF4P18848 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
ATF4P18848 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ATF4P18848 MIR367-201ENST00000362299 68 ntBASIC2.92□□□□□ -1.94
ATF4P18848 RNU6-862P-201ENST00000362804 105 ntBASIC2.92□□□□□ -1.94
ATF4P18848 SNORA62.3-201ENST00000365110 153 ntBASIC2.92□□□□□ -1.94
ATF4P18848 RNU4-17P-201ENST00000365598 141 ntBASIC2.92□□□□□ -1.94
ATF4P18848 SNORA72-201ENST00000384339 132 ntBASIC2.92□□□□□ -1.94
ATF4P18848 MIR449B-201ENST00000384995 97 ntBASIC2.92□□□□□ -1.94
ATF4P18848 RNU6-493P-201ENST00000391321 108 ntBASIC2.92□□□□□ -1.94
ATF4P18848 BX510359.4-201ENST00000423750 193 ntBASIC2.92□□□□□ -1.94
ATF4P18848 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.92□□□□□ -1.94
ATF4P18848 AL133547.1-201ENST00000448546 220 ntBASIC2.92□□□□□ -1.94
ATF4P18848 RNY3P16-201ENST00000516338 101 ntBASIC2.92□□□□□ -1.94
ATF4P18848 SNORA67.7-201ENST00000516664 135 ntBASIC2.92□□□□□ -1.94
ATF4P18848 MIR2276-201ENST00000516886 89 ntBASIC2.92□□□□□ -1.94
ATF4P18848 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ATF4P18848 AC127455.1-201ENST00000565496 145 ntBASIC2.92□□□□□ -1.94
ATF4P18848 MIR5685-201ENST00000579080 79 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 156.8 ms