Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AC068205.3-201ENST00000636385 468 ntBASIC2.1□□□□□ -2.07
CDH1P12830 Y_RNA.149-201ENST00000363558 117 ntBASIC2.09□□□□□ -2.07
CDH1P12830 Y_RNA.222-201ENST00000364264 102 ntBASIC2.09□□□□□ -2.07
CDH1P12830 SNORD87-201ENST00000364849 89 ntBASIC2.09□□□□□ -2.07
CDH1P12830 RNU6-463P-201ENST00000384340 107 ntBASIC2.09□□□□□ -2.07
CDH1P12830 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.09□□□□□ -2.07
CDH1P12830 DYNLT3P2-201ENST00000442517 295 ntBASIC2.09□□□□□ -2.07
CDH1P12830 UQCRBP2-201ENST00000447827 297 ntBASIC2.09□□□□□ -2.07
CDH1P12830 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.09□□□□□ -2.07
CDH1P12830 LINC01399-202ENST00000458450 244 ntBASIC2.09□□□□□ -2.07
CDH1P12830 RNU6-717P-201ENST00000459076 104 ntBASIC2.09□□□□□ -2.07
CDH1P12830 RNY3P15-201ENST00000516297 97 ntBASIC2.09□□□□□ -2.07
CDH1P12830 SNORA40.15-201ENST00000516884 107 ntBASIC2.09□□□□□ -2.07
CDH1P12830 RNU1-117P-201ENST00000517041 158 ntBASIC2.09□□□□□ -2.07
CDH1P12830 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.09□□□□□ -2.07
CDH1P12830 AL590808.1-201ENST00000618696 141 ntBASIC2.09□□□□□ -2.07
CDH1P12830 AC130454.1-201ENST00000622948 401 ntBASIC2.09□□□□□ -2.07
CDH1P12830 AC008873.1-201ENST00000625051 138 ntBASIC2.09□□□□□ -2.07
CDH1P12830 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.09□□□□□ -2.07
CDH1P12830 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CDH1P12830 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CDH1P12830 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CDH1P12830 Y_RNA.19-201ENST00000362462 99 ntBASIC2.08□□□□□ -2.08
CDH1P12830 Y_RNA.64-201ENST00000362845 102 ntBASIC2.08□□□□□ -2.08
CDH1P12830 Y_RNA.143-201ENST00000363520 106 ntBASIC2.08□□□□□ -2.08
CDH1P12830 RNU6-574P-201ENST00000384265 107 ntBASIC2.08□□□□□ -2.08
CDH1P12830 SNORD115-46-201ENST00000390982 71 ntBASIC2.08□□□□□ -2.08
CDH1P12830 AL355497.1-201ENST00000406262 551 ntBASIC2.08□□□□□ -2.08
CDH1P12830 SNORA3.2-201ENST00000408221 125 ntBASIC2.08□□□□□ -2.08
CDH1P12830 RNU2-20P-201ENST00000410425 191 ntBASIC2.08□□□□□ -2.08
CDH1P12830 AC005002.2-201ENST00000438228 269 ntBASIC2.08□□□□□ -2.08
CDH1P12830 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.08□□□□□ -2.08
CDH1P12830 RNU7-14P-201ENST00000459331 62 ntBASIC2.08□□□□□ -2.08
CDH1P12830 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.08□□□□□ -2.08
CDH1P12830 RPL23AP94-201ENST00000512518 302 ntBASIC2.08□□□□□ -2.08
CDH1P12830 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.08□□□□□ -2.08
CDH1P12830 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.08□□□□□ -2.08
CDH1P12830 AP002001.1-203ENST00000534002 267 ntBASIC2.08□□□□□ -2.08
CDH1P12830 AC018448.1-201ENST00000552843 316 ntBASIC2.08□□□□□ -2.08
CDH1P12830 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.08□□□□□ -2.08
CDH1P12830 MIR4423-201ENST00000580922 80 ntBASIC2.08□□□□□ -2.08
CDH1P12830 MIR4300-201ENST00000581016 96 ntBASIC2.08□□□□□ -2.08
CDH1P12830 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.08□□□□□ -2.08
CDH1P12830 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.08□□□□□ -2.08
CDH1P12830 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
CDH1P12830 LINC02555-201ENST00000563933 1951 ntBASIC2.07□□□□□ -2.08
CDH1P12830 RNU6-545P-201ENST00000362681 104 ntBASIC2.07□□□□□ -2.08
CDH1P12830 RNU6-626P-201ENST00000363354 107 ntBASIC2.07□□□□□ -2.08
CDH1P12830 RNA5SP138-201ENST00000365098 114 ntBASIC2.07□□□□□ -2.08
CDH1P12830 RNU6-20P-201ENST00000384106 107 ntBASIC2.07□□□□□ -2.08
CDH1P12830 RNU6-196P-201ENST00000384315 107 ntBASIC2.07□□□□□ -2.08
CDH1P12830 RNU6-937P-201ENST00000384325 106 ntBASIC2.07□□□□□ -2.08
CDH1P12830 MIR586-201ENST00000385035 97 ntBASIC2.07□□□□□ -2.08
CDH1P12830 MIR561-201ENST00000385216 97 ntBASIC2.07□□□□□ -2.08
CDH1P12830 SNORA11.4-201ENST00000408823 129 ntBASIC2.07□□□□□ -2.08
CDH1P12830 RNA5SP338-201ENST00000410495 85 ntBASIC2.07□□□□□ -2.08
CDH1P12830 RPL21P38-201ENST00000418090 167 ntBASIC2.07□□□□□ -2.08
CDH1P12830 Z98742.3-201ENST00000418637 326 ntBASIC2.07□□□□□ -2.08
CDH1P12830 RAB28P5-201ENST00000427490 651 ntBASIC2.07□□□□□ -2.08
CDH1P12830 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.07□□□□□ -2.08
CDH1P12830 RNU6-625P-201ENST00000459412 107 ntBASIC2.07□□□□□ -2.08
CDH1P12830 AC025033.1-201ENST00000463883 194 ntBASIC2.07□□□□□ -2.08
CDH1P12830 HMGN2P9-201ENST00000476875 229 ntBASIC2.07□□□□□ -2.08
CDH1P12830 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.07□□□□□ -2.08
CDH1P12830 RNU6-1143P-201ENST00000516125 104 ntBASIC2.07□□□□□ -2.08
CDH1P12830 SCARNA16.3-201ENST00000516595 184 ntBASIC2.07□□□□□ -2.08
CDH1P12830 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.07□□□□□ -2.08
CDH1P12830 AC055872.1-201ENST00000570978 278 ntBASIC2.07□□□□□ -2.08
CDH1P12830 MIR4503-201ENST00000582187 83 ntBASIC2.07□□□□□ -2.08
CDH1P12830 AC002984.1-201ENST00000591692 448 ntBASIC2.07□□□□□ -2.08
CDH1P12830 7SK.10-201ENST00000621414 298 ntBASIC2.07□□□□□ -2.08
CDH1P12830 AC064859.1-201ENST00000624741 174 ntBASIC2.07□□□□□ -2.08
CDH1P12830 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.07□□□□□ -2.08
CDH1P12830 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.06□□□□□ -2.08
CDH1P12830 MIR410-201ENST00000362222 80 ntBASIC2.06□□□□□ -2.08
CDH1P12830 SNORD63-201ENST00000384262 68 ntBASIC2.06□□□□□ -2.08
CDH1P12830 Y_RNA.462-201ENST00000384268 102 ntBASIC2.06□□□□□ -2.08
CDH1P12830 Y_RNA.498-201ENST00000384460 102 ntBASIC2.06□□□□□ -2.08
CDH1P12830 AL135786.1-201ENST00000415892 214 ntBASIC2.06□□□□□ -2.08
CDH1P12830 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.06□□□□□ -2.08
CDH1P12830 AL356320.1-201ENST00000429616 163 ntBASIC2.06□□□□□ -2.08
CDH1P12830 RPL23AP7-203ENST00000449021 469 ntBASIC2.06□□□□□ -2.08
CDH1P12830 HMGN2P18-201ENST00000450680 270 ntBASIC2.06□□□□□ -2.08
CDH1P12830 AL021397.1-201ENST00000451806 248 ntBASIC2.06□□□□□ -2.08
CDH1P12830 AC098869.1-201ENST00000481627 292 ntBASIC2.06□□□□□ -2.08
CDH1P12830 AP003733.2-201ENST00000529409 171 ntBASIC2.06□□□□□ -2.08
CDH1P12830 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.06□□□□□ -2.08
CDH1P12830 AL161670.1-201ENST00000554348 137 ntBASIC2.06□□□□□ -2.08
CDH1P12830 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.06□□□□□ -2.08
CDH1P12830 MIR5002-201ENST00000584713 97 ntBASIC2.06□□□□□ -2.08
CDH1P12830 MIR376A1-201ENST00000616574 68 ntBASIC2.06□□□□□ -2.08
CDH1P12830 AL449363.1-201ENST00000617815 186 ntBASIC2.06□□□□□ -2.08
CDH1P12830 U4atac.1-201ENST00000618345 95 ntBASIC2.06□□□□□ -2.08
CDH1P12830 MIR8062-201ENST00000621515 85 ntBASIC2.06□□□□□ -2.08
CDH1P12830 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.06□□□□□ -2.08
CDH1P12830 RNU6-743P-201ENST00000364151 106 ntBASIC2.05□□□□□ -2.08
CDH1P12830 Y_RNA.230-201ENST00000364348 109 ntBASIC2.05□□□□□ -2.08
CDH1P12830 SNORD31B-201ENST00000364977 69 ntBASIC2.05□□□□□ -2.08
CDH1P12830 SNORA25B-201ENST00000365507 128 ntBASIC2.05□□□□□ -2.08
CDH1P12830 RNU6-472P-201ENST00000384299 107 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms