Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 MIR5739-201ENST00000619803 80 ntBASIC3.01□□□□□ -1.93
COL6A2P12110 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
COL6A2P12110 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
COL6A2P12110 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
COL6A2P12110 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3□□□□□ -1.93
COL6A2P12110 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3□□□□□ -1.93
COL6A2P12110 RNA5SP267-201ENST00000364893 126 ntBASIC3□□□□□ -1.93
COL6A2P12110 Y_RNA.310-201ENST00000365063 113 ntBASIC3□□□□□ -1.93
COL6A2P12110 AL357139.1-201ENST00000407792 426 ntBASIC3□□□□□ -1.93
COL6A2P12110 AL451074.5-201ENST00000415894 435 ntBASIC3□□□□□ -1.93
COL6A2P12110 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
COL6A2P12110 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3□□□□□ -1.93
COL6A2P12110 U8.19-201ENST00000459095 133 ntBASIC3□□□□□ -1.93
COL6A2P12110 RNU6-221P-201ENST00000459541 99 ntBASIC3□□□□□ -1.93
COL6A2P12110 RPL27AP5-201ENST00000469428 449 ntBASIC3□□□□□ -1.93
COL6A2P12110 AP004217.1-201ENST00000480579 346 ntBASIC3□□□□□ -1.93
COL6A2P12110 AC074198.2-201ENST00000508153 258 ntBASIC3□□□□□ -1.93
COL6A2P12110 SUMO2P18-201ENST00000518873 252 ntBASIC3□□□□□ -1.93
COL6A2P12110 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3□□□□□ -1.93
COL6A2P12110 snoZ196.1-201ENST00000625269 89 ntBASIC3□□□□□ -1.93
COL6A2P12110 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3□□□□□ -1.93
COL6A2P12110 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
COL6A2P12110 AC073325.2-201ENST00000339545 159 ntBASIC2.99□□□□□ -1.93
COL6A2P12110 SNORA72.4-201ENST00000384174 132 ntBASIC2.99□□□□□ -1.93
COL6A2P12110 MIR218-1-201ENST00000384999 110 ntBASIC2.99□□□□□ -1.93
COL6A2P12110 SNORA26.5-201ENST00000391215 123 ntBASIC2.99□□□□□ -1.93
COL6A2P12110 RNU6-493P-201ENST00000391321 108 ntBASIC2.99□□□□□ -1.93
COL6A2P12110 RPL39P40-201ENST00000445481 146 ntBASIC2.99□□□□□ -1.93
COL6A2P12110 AC016925.1-201ENST00000458303 298 ntBASIC2.99□□□□□ -1.93
COL6A2P12110 ATP5EP1-201ENST00000510257 156 ntBASIC2.99□□□□□ -1.93
COL6A2P12110 HMGB3P3-201ENST00000510526 400 ntBASIC2.99□□□□□ -1.93
COL6A2P12110 MIR3199-1-201ENST00000582434 88 ntBASIC2.99□□□□□ -1.93
COL6A2P12110 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.99□□□□□ -1.93
COL6A2P12110 AC013791.1-201ENST00000616619 62 ntBASIC2.99□□□□□ -1.93
COL6A2P12110 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.99□□□□□ -1.93
COL6A2P12110 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
COL6A2P12110 AC080128.1-201ENST00000474389 1917 ntBASIC2.99□□□□□ -1.93
COL6A2P12110 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL6A2P12110 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
COL6A2P12110 SNORA38.1-201ENST00000364172 131 ntBASIC2.98□□□□□ -1.93
COL6A2P12110 Y_RNA.287-201ENST00000364853 94 ntBASIC2.98□□□□□ -1.93
COL6A2P12110 Y_RNA.341-201ENST00000365341 102 ntBASIC2.98□□□□□ -1.93
COL6A2P12110 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.98□□□□□ -1.93
COL6A2P12110 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.98□□□□□ -1.93
COL6A2P12110 CYP2C59P-201ENST00000457790 269 ntBASIC2.98□□□□□ -1.93
COL6A2P12110 AC090515.1-201ENST00000465295 476 ntBASIC2.98□□□□□ -1.93
COL6A2P12110 RPS29P2-201ENST00000479278 136 ntBASIC2.98□□□□□ -1.93
COL6A2P12110 RNU6-948P-201ENST00000516374 107 ntBASIC2.98□□□□□ -1.93
COL6A2P12110 RNU6-406P-201ENST00000516470 107 ntBASIC2.98□□□□□ -1.93
COL6A2P12110 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.98□□□□□ -1.93
COL6A2P12110 AC023043.3-201ENST00000593113 385 ntBASIC2.98□□□□□ -1.93
COL6A2P12110 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
COL6A2P12110 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
COL6A2P12110 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
COL6A2P12110 Y_RNA.7-201ENST00000362352 102 ntBASIC2.97□□□□□ -1.93
COL6A2P12110 Y_RNA.121-201ENST00000363309 113 ntBASIC2.97□□□□□ -1.93
COL6A2P12110 RNU6-899P-201ENST00000363947 107 ntBASIC2.97□□□□□ -1.93
COL6A2P12110 Y_RNA.441-201ENST00000384123 112 ntBASIC2.97□□□□□ -1.93
COL6A2P12110 Y_RNA.571-201ENST00000384753 98 ntBASIC2.97□□□□□ -1.93
COL6A2P12110 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
COL6A2P12110 SNORD67-201ENST00000390833 111 ntBASIC2.97□□□□□ -1.93
COL6A2P12110 SNORA48.5-201ENST00000391143 135 ntBASIC2.97□□□□□ -1.93
COL6A2P12110 MIR873-201ENST00000401120 77 ntBASIC2.97□□□□□ -1.93
COL6A2P12110 AL355497.1-201ENST00000406262 551 ntBASIC2.97□□□□□ -1.93
COL6A2P12110 RNU6-394P-201ENST00000410735 107 ntBASIC2.97□□□□□ -1.93
COL6A2P12110 RN7SKP51-201ENST00000410781 304 ntBASIC2.97□□□□□ -1.93
COL6A2P12110 AC005326.1-201ENST00000429197 123 ntBASIC2.97□□□□□ -1.93
COL6A2P12110 AC006028.1-201ENST00000438379 402 ntBASIC2.97□□□□□ -1.93
COL6A2P12110 AL161788.1-201ENST00000441805 169 ntBASIC2.97□□□□□ -1.93
COL6A2P12110 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.97□□□□□ -1.93
COL6A2P12110 HSPE1P13-201ENST00000451143 297 ntBASIC2.97□□□□□ -1.93
COL6A2P12110 RN7SL807P-201ENST00000470923 297 ntBASIC2.97□□□□□ -1.93
COL6A2P12110 RNU6-1219P-201ENST00000516143 112 ntBASIC2.97□□□□□ -1.93
COL6A2P12110 RNU6-789P-201ENST00000517105 102 ntBASIC2.97□□□□□ -1.93
COL6A2P12110 AC022616.8-201ENST00000533569 253 ntBASIC2.97□□□□□ -1.93
COL6A2P12110 UBL5P2-201ENST00000583788 219 ntBASIC2.97□□□□□ -1.93
COL6A2P12110 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.97□□□□□ -1.93
COL6A2P12110 AL356280.1-201ENST00000603614 379 ntBASIC2.97□□□□□ -1.93
COL6A2P12110 AC025754.2-201ENST00000606491 432 ntBASIC2.97□□□□□ -1.93
COL6A2P12110 AC007318.2-201ENST00000620999 243 ntBASIC2.97□□□□□ -1.93
COL6A2P12110 MIR3651-201ENST00000630427 90 ntBASIC2.97□□□□□ -1.93
COL6A2P12110 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
COL6A2P12110 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
COL6A2P12110 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.97□□□□□ -1.93
COL6A2P12110 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
COL6A2P12110 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.97□□□□□ -1.93
COL6A2P12110 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.97□□□□□ -1.93
COL6A2P12110 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.96□□□□□ -1.93
COL6A2P12110 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
COL6A2P12110 RNU6-546P-201ENST00000383991 107 ntBASIC2.96□□□□□ -1.94
COL6A2P12110 AL355796.1-201ENST00000406706 323 ntBASIC2.96□□□□□ -1.94
COL6A2P12110 RNU6-855P-201ENST00000410395 104 ntBASIC2.96□□□□□ -1.94
COL6A2P12110 RNA5SP120-201ENST00000410900 112 ntBASIC2.96□□□□□ -1.94
COL6A2P12110 AC010598.1-201ENST00000510378 103 ntBASIC2.96□□□□□ -1.94
COL6A2P12110 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.96□□□□□ -1.94
COL6A2P12110 AC100767.1-201ENST00000528178 123 ntBASIC2.96□□□□□ -1.94
COL6A2P12110 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.96□□□□□ -1.94
COL6A2P12110 MIR5688-201ENST00000580619 83 ntBASIC2.96□□□□□ -1.94
COL6A2P12110 SCARNA15.3-201ENST00000626315 122 ntBASIC2.96□□□□□ -1.94
COL6A2P12110 SCARNA4.1-201ENST00000628597 123 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 159.1 ms