Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 RNU6-966P-201ENST00000516479 104 ntBASIC2.9□□□□□ -1.95
SNRPA1P09661 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.9□□□□□ -1.95
SNRPA1P09661 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.9□□□□□ -1.95
SNRPA1P09661 MIR5006-201ENST00000583027 110 ntBASIC2.9□□□□□ -1.95
SNRPA1P09661 AC008749.1-201ENST00000597650 306 ntBASIC2.9□□□□□ -1.95
SNRPA1P09661 AL670379.2-201ENST00000604983 252 ntBASIC2.9□□□□□ -1.95
SNRPA1P09661 U2.14-201ENST00000615943 113 ntBASIC2.9□□□□□ -1.95
SNRPA1P09661 AC090517.3-201ENST00000625170 141 ntBASIC2.9□□□□□ -1.95
SNRPA1P09661 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.9□□□□□ -1.95
SNRPA1P09661 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
SNRPA1P09661 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.9□□□□□ -1.95
SNRPA1P09661 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.89□□□□□ -1.95
SNRPA1P09661 SNORD87-201ENST00000364849 89 ntBASIC2.89□□□□□ -1.95
SNRPA1P09661 Y_RNA.446-201ENST00000384178 104 ntBASIC2.89□□□□□ -1.95
SNRPA1P09661 Y_RNA.569-201ENST00000384749 103 ntBASIC2.89□□□□□ -1.95
SNRPA1P09661 SNORA53-201ENST00000391141 249 ntBASIC2.89□□□□□ -1.95
SNRPA1P09661 RPL19P1-201ENST00000411635 428 ntBASIC2.89□□□□□ -1.95
SNRPA1P09661 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.89□□□□□ -1.95
SNRPA1P09661 RNA5SP112-201ENST00000515937 99 ntBASIC2.89□□□□□ -1.95
SNRPA1P09661 RPPH1-2P-201ENST00000516688 293 ntBASIC2.89□□□□□ -1.95
SNRPA1P09661 RNU2-31P-201ENST00000516954 155 ntBASIC2.89□□□□□ -1.95
SNRPA1P09661 RNU1-117P-201ENST00000517041 158 ntBASIC2.89□□□□□ -1.95
SNRPA1P09661 CYCSP23-201ENST00000519781 313 ntBASIC2.89□□□□□ -1.95
SNRPA1P09661 AP002001.1-203ENST00000534002 267 ntBASIC2.89□□□□□ -1.95
SNRPA1P09661 AC026470.2-201ENST00000561492 181 ntBASIC2.89□□□□□ -1.95
SNRPA1P09661 MIR4643-201ENST00000577473 78 ntBASIC2.89□□□□□ -1.95
SNRPA1P09661 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.89□□□□□ -1.95
SNRPA1P09661 TCL6_2.1-201ENST00000615162 119 ntBASIC2.89□□□□□ -1.95
SNRPA1P09661 AC006001.4-201ENST00000622243 395 ntBASIC2.89□□□□□ -1.95
SNRPA1P09661 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.89□□□□□ -1.95
SNRPA1P09661 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.89□□□□□ -1.95
SNRPA1P09661 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SNRPA1P09661 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.88□□□□□ -1.95
SNRPA1P09661 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SNRPA1P09661 SNORD114-1-201ENST00000362705 72 ntBASIC2.88□□□□□ -1.95
SNRPA1P09661 Y_RNA.101-201ENST00000363154 102 ntBASIC2.88□□□□□ -1.95
SNRPA1P09661 SNORA68.1-201ENST00000364537 132 ntBASIC2.88□□□□□ -1.95
SNRPA1P09661 Y_RNA.269-201ENST00000364685 89 ntBASIC2.88□□□□□ -1.95
SNRPA1P09661 RNU2-14P-201ENST00000411053 191 ntBASIC2.88□□□□□ -1.95
SNRPA1P09661 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.88□□□□□ -1.95
SNRPA1P09661 MRPS10P1-201ENST00000448483 130 ntBASIC2.88□□□□□ -1.95
SNRPA1P09661 RNU2-44P-201ENST00000516795 194 ntBASIC2.88□□□□□ -1.95
SNRPA1P09661 AC007536.1-201ENST00000533382 349 ntBASIC2.88□□□□□ -1.95
SNRPA1P09661 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SNRPA1P09661 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.88□□□□□ -1.95
SNRPA1P09661 BX284668.6-201ENST00000606899 438 ntBASIC2.88□□□□□ -1.95
SNRPA1P09661 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.88□□□□□ -1.95
SNRPA1P09661 AC004467.1-201ENST00000615678 330 ntBASIC2.88□□□□□ -1.95
SNRPA1P09661 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SNRPA1P09661 AC091932.3-201ENST00000624223 323 ntBASIC2.88□□□□□ -1.95
SNRPA1P09661 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SNRPA1P09661 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.87□□□□□ -1.95
SNRPA1P09661 RNU6-326P-201ENST00000365480 107 ntBASIC2.87□□□□□ -1.95
SNRPA1P09661 SNORA64-201ENST00000384674 134 ntBASIC2.87□□□□□ -1.95
SNRPA1P09661 RNU6-1328P-201ENST00000410938 106 ntBASIC2.87□□□□□ -1.95
SNRPA1P09661 AL390729.2-201ENST00000416137 156 ntBASIC2.87□□□□□ -1.95
SNRPA1P09661 POLR2KP2-201ENST00000438155 177 ntBASIC2.87□□□□□ -1.95
SNRPA1P09661 RNU6-138P-201ENST00000515952 107 ntBASIC2.87□□□□□ -1.95
SNRPA1P09661 RNU6-107P-201ENST00000516643 102 ntBASIC2.87□□□□□ -1.95
SNRPA1P09661 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.87□□□□□ -1.95
SNRPA1P09661 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.87□□□□□ -1.95
SNRPA1P09661 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.87□□□□□ -1.95
SNRPA1P09661 AC022441.3-201ENST00000605737 136 ntBASIC2.87□□□□□ -1.95
SNRPA1P09661 AC037487.3-201ENST00000606668 112 ntBASIC2.87□□□□□ -1.95
SNRPA1P09661 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.87□□□□□ -1.95
SNRPA1P09661 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.86□□□□□ -1.95
SNRPA1P09661 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.86□□□□□ -1.95
SNRPA1P09661 Y_RNA.44-201ENST00000362676 108 ntBASIC2.86□□□□□ -1.95
SNRPA1P09661 RNU6-486P-201ENST00000363116 107 ntBASIC2.86□□□□□ -1.95
SNRPA1P09661 Y_RNA.383-201ENST00000383855 97 ntBASIC2.86□□□□□ -1.95
SNRPA1P09661 Y_RNA.418-201ENST00000384029 102 ntBASIC2.86□□□□□ -1.95
SNRPA1P09661 RNA5SP504-201ENST00000410676 117 ntBASIC2.86□□□□□ -1.95
SNRPA1P09661 RN7SKP123-201ENST00000410732 291 ntBASIC2.86□□□□□ -1.95
SNRPA1P09661 RPL23AP36-201ENST00000413895 458 ntBASIC2.86□□□□□ -1.95
SNRPA1P09661 AC009237.7-201ENST00000447357 229 ntBASIC2.86□□□□□ -1.95
SNRPA1P09661 RPS27AP9-201ENST00000477681 438 ntBASIC2.86□□□□□ -1.95
SNRPA1P09661 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.86□□□□□ -1.95
SNRPA1P09661 AC130289.1-201ENST00000577321 73 ntBASIC2.86□□□□□ -1.95
SNRPA1P09661 AL109918.3-201ENST00000603072 338 ntBASIC2.86□□□□□ -1.95
SNRPA1P09661 AC009779.6-201ENST00000603972 165 ntBASIC2.86□□□□□ -1.95
SNRPA1P09661 SNORD11B-201ENST00000607707 90 ntBASIC2.86□□□□□ -1.95
SNRPA1P09661 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.86□□□□□ -1.95
SNRPA1P09661 MIR7515-201ENST00000637837 67 ntBASIC2.86□□□□□ -1.95
SNRPA1P09661 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.86□□□□□ -1.95
SNRPA1P09661 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SNRPA1P09661 SNORA25.1-201ENST00000362326 128 ntBASIC2.85□□□□□ -1.95
SNRPA1P09661 RNU1-72P-201ENST00000362976 153 ntBASIC2.85□□□□□ -1.95
SNRPA1P09661 MIR218-1-201ENST00000384999 110 ntBASIC2.85□□□□□ -1.95
SNRPA1P09661 MIR1289-2-201ENST00000408360 111 ntBASIC2.85□□□□□ -1.95
SNRPA1P09661 Y_RNA.597-201ENST00000410463 100 ntBASIC2.85□□□□□ -1.95
SNRPA1P09661 MTND5P15-201ENST00000434246 349 ntBASIC2.85□□□□□ -1.95
SNRPA1P09661 AC005042.3-201ENST00000453230 174 ntBASIC2.85□□□□□ -1.95
SNRPA1P09661 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.85□□□□□ -1.95
SNRPA1P09661 RNU6-344P-201ENST00000516635 111 ntBASIC2.85□□□□□ -1.95
SNRPA1P09661 SCARNA11.3-201ENST00000517276 130 ntBASIC2.85□□□□□ -1.95
SNRPA1P09661 MIR3674-201ENST00000636576 68 ntBASIC2.85□□□□□ -1.95
SNRPA1P09661 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SNRPA1P09661 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.85□□□□□ -1.95
SNRPA1P09661 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SNRPA1P09661 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms