Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 RN7SKP282-201ENST00000516824 299 ntBASIC3.62□□□□□ -1.83
THBS1P07996 AC068339.1-201ENST00000526965 141 ntBASIC3.62□□□□□ -1.83
THBS1P07996 AC087685.1-201ENST00000587507 141 ntBASIC3.62□□□□□ -1.83
THBS1P07996 AC012531.5-201ENST00000611375 151 ntBASIC3.62□□□□□ -1.83
THBS1P07996 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
THBS1P07996 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.62□□□□□ -1.83
THBS1P07996 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
THBS1P07996 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
THBS1P07996 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.62□□□□□ -1.83
THBS1P07996 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.62□□□□□ -1.83
THBS1P07996 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
THBS1P07996 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.61□□□□□ -1.83
THBS1P07996 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.61□□□□□ -1.83
THBS1P07996 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
THBS1P07996 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
THBS1P07996 RNA5SP322-201ENST00000363617 119 ntBASIC3.61□□□□□ -1.83
THBS1P07996 RNA5SP130-201ENST00000364431 114 ntBASIC3.61□□□□□ -1.83
THBS1P07996 SNRPGP3-201ENST00000469405 227 ntBASIC3.61□□□□□ -1.83
THBS1P07996 MRPS17P9-201ENST00000511924 393 ntBASIC3.61□□□□□ -1.83
THBS1P07996 RNA5SP112-201ENST00000515937 99 ntBASIC3.61□□□□□ -1.83
THBS1P07996 SNORA70.14-201ENST00000516205 110 ntBASIC3.61□□□□□ -1.83
THBS1P07996 Y_RNA.714-201ENST00000517065 90 ntBASIC3.61□□□□□ -1.83
THBS1P07996 RNA5SP179-201ENST00000517284 121 ntBASIC3.61□□□□□ -1.83
THBS1P07996 AC103810.1-201ENST00000579873 453 ntBASIC3.61□□□□□ -1.83
THBS1P07996 MIR3158-1-201ENST00000583596 81 ntBASIC3.61□□□□□ -1.83
THBS1P07996 MIR3117-201ENST00000584034 78 ntBASIC3.61□□□□□ -1.83
THBS1P07996 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.61□□□□□ -1.83
THBS1P07996 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
THBS1P07996 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
THBS1P07996 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
THBS1P07996 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
THBS1P07996 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
THBS1P07996 MIR302B-201ENST00000362188 73 ntBASIC3.6□□□□□ -1.83
THBS1P07996 MIR423-201ENST00000362201 94 ntBASIC3.6□□□□□ -1.83
THBS1P07996 Y_RNA.93-201ENST00000363066 109 ntBASIC3.6□□□□□ -1.83
THBS1P07996 RNU6-414P-201ENST00000363705 104 ntBASIC3.6□□□□□ -1.83
THBS1P07996 SNORD61-201ENST00000384252 73 ntBASIC3.6□□□□□ -1.83
THBS1P07996 RNU6-1152P-201ENST00000384576 107 ntBASIC3.6□□□□□ -1.83
THBS1P07996 MIR23B-201ENST00000384832 97 ntBASIC3.6□□□□□ -1.83
THBS1P07996 MIR199A2-201ENST00000385289 110 ntBASIC3.6□□□□□ -1.83
THBS1P07996 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.6□□□□□ -1.83
THBS1P07996 HMGN1P7-201ENST00000491722 313 ntBASIC3.6□□□□□ -1.83
THBS1P07996 MIR449C-201ENST00000516047 92 ntBASIC3.6□□□□□ -1.83
THBS1P07996 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.6□□□□□ -1.83
THBS1P07996 SCARNA15-202ENST00000516881 127 ntBASIC3.6□□□□□ -1.83
THBS1P07996 RNU6-1270P-201ENST00000517128 108 ntBASIC3.6□□□□□ -1.83
THBS1P07996 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.6□□□□□ -1.83
THBS1P07996 MIR4429-201ENST00000580105 73 ntBASIC3.6□□□□□ -1.83
THBS1P07996 MIR4286-201ENST00000580651 93 ntBASIC3.6□□□□□ -1.83
THBS1P07996 AC091167.4-201ENST00000605079 184 ntBASIC3.6□□□□□ -1.83
THBS1P07996 MALAT1.1-201ENST00000618249 95 ntBASIC3.6□□□□□ -1.83
THBS1P07996 AC134878.1-201ENST00000619901 243 ntBASIC3.6□□□□□ -1.83
THBS1P07996 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.6□□□□□ -1.83
THBS1P07996 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.59□□□□□ -1.83
THBS1P07996 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.59□□□□□ -1.83
THBS1P07996 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
THBS1P07996 AL117342.1-201ENST00000404861 406 ntBASIC3.59□□□□□ -1.83
THBS1P07996 AC016909.1-201ENST00000415916 166 ntBASIC3.59□□□□□ -1.83
THBS1P07996 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.59□□□□□ -1.83
THBS1P07996 RN7SL542P-201ENST00000467147 294 ntBASIC3.59□□□□□ -1.83
THBS1P07996 RNU6-1096P-201ENST00000517089 102 ntBASIC3.59□□□□□ -1.83
THBS1P07996 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.59□□□□□ -1.83
THBS1P07996 AC084364.2-201ENST00000546924 395 ntBASIC3.59□□□□□ -1.83
THBS1P07996 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
THBS1P07996 MAPK10-372ENST00000641954 3413 ntBASIC3.59□□□□□ -1.83
THBS1P07996 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.84
THBS1P07996 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.59□□□□□ -1.84
THBS1P07996 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.59□□□□□ -1.84
THBS1P07996 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.59□□□□□ -1.84
THBS1P07996 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.59□□□□□ -1.84
THBS1P07996 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
THBS1P07996 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
THBS1P07996 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
THBS1P07996 RNU6-418P-201ENST00000384035 107 ntBASIC3.58□□□□□ -1.84
THBS1P07996 RNU6-628P-201ENST00000410675 107 ntBASIC3.58□□□□□ -1.84
THBS1P07996 Y_RNA.621-201ENST00000411065 96 ntBASIC3.58□□□□□ -1.84
THBS1P07996 AL513477.1-202ENST00000417061 214 ntBASIC3.58□□□□□ -1.84
THBS1P07996 SNRPGP13-201ENST00000442212 177 ntBASIC3.58□□□□□ -1.84
THBS1P07996 NDUFA4P2-201ENST00000489989 244 ntBASIC3.58□□□□□ -1.84
THBS1P07996 AC006445.1-201ENST00000491925 405 ntBASIC3.58□□□□□ -1.84
THBS1P07996 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.58□□□□□ -1.84
THBS1P07996 RNU6-693P-201ENST00000516134 107 ntBASIC3.58□□□□□ -1.84
THBS1P07996 RNU6-109P-201ENST00000516364 107 ntBASIC3.58□□□□□ -1.84
THBS1P07996 RNU6-184P-201ENST00000516514 107 ntBASIC3.58□□□□□ -1.84
THBS1P07996 RNA5SP143-201ENST00000516936 115 ntBASIC3.58□□□□□ -1.84
THBS1P07996 SNORA31.21-201ENST00000517180 77 ntBASIC3.58□□□□□ -1.84
THBS1P07996 RNU6-1231P-201ENST00000517185 103 ntBASIC3.58□□□□□ -1.84
THBS1P07996 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.58□□□□□ -1.84
THBS1P07996 MIR5197-201ENST00000583721 112 ntBASIC3.58□□□□□ -1.84
THBS1P07996 MIR4765-201ENST00000585007 77 ntBASIC3.58□□□□□ -1.84
THBS1P07996 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
THBS1P07996 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
THBS1P07996 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
THBS1P07996 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
THBS1P07996 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
THBS1P07996 MFSD8-236ENST00000641509 4050 ntBASIC3.57□□□□□ -1.84
THBS1P07996 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
THBS1P07996 RNU6-573P-201ENST00000383938 106 ntBASIC3.57□□□□□ -1.84
THBS1P07996 RNY1P7-201ENST00000384743 110 ntBASIC3.57□□□□□ -1.84
THBS1P07996 SNORD78.1-201ENST00000390866 65 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms