Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 RNU6-1180P-201ENST00000364935 107 ntBASIC3.75□□□□□ -1.81
NEFMP07197 RNU6-748P-201ENST00000384648 107 ntBASIC3.75□□□□□ -1.81
NEFMP07197 RNU6-131P-201ENST00000391144 107 ntBASIC3.75□□□□□ -1.81
NEFMP07197 CBX3P9-201ENST00000402326 552 ntBASIC3.75□□□□□ -1.81
NEFMP07197 SNORD88.1-201ENST00000408684 91 ntBASIC3.75□□□□□ -1.81
NEFMP07197 AL513477.1-202ENST00000417061 214 ntBASIC3.75□□□□□ -1.81
NEFMP07197 PTGES3P4-201ENST00000426243 356 ntBASIC3.75□□□□□ -1.81
NEFMP07197 AC103975.1-201ENST00000482506 483 ntBASIC3.75□□□□□ -1.81
NEFMP07197 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.75□□□□□ -1.81
NEFMP07197 AL034555.1-201ENST00000604816 211 ntBASIC3.75□□□□□ -1.81
NEFMP07197 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.75□□□□□ -1.81
NEFMP07197 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NEFMP07197 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.75□□□□□ -1.81
NEFMP07197 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
NEFMP07197 RNU6-1154P-201ENST00000391001 104 ntBASIC3.74□□□□□ -1.81
NEFMP07197 AL590004.2-201ENST00000404787 371 ntBASIC3.74□□□□□ -1.81
NEFMP07197 U3.40-201ENST00000408706 208 ntBASIC3.74□□□□□ -1.81
NEFMP07197 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.74□□□□□ -1.81
NEFMP07197 SEPT7P4-201ENST00000437076 306 ntBASIC3.74□□□□□ -1.81
NEFMP07197 RPS20P10-201ENST00000451209 253 ntBASIC3.74□□□□□ -1.81
NEFMP07197 AL441985.1-201ENST00000457727 251 ntBASIC3.74□□□□□ -1.81
NEFMP07197 Y_RNA.637-201ENST00000459424 114 ntBASIC3.74□□□□□ -1.81
NEFMP07197 RNU5F-2P-201ENST00000516066 82 ntBASIC3.74□□□□□ -1.81
NEFMP07197 AC100767.1-201ENST00000528178 123 ntBASIC3.74□□□□□ -1.81
NEFMP07197 MIR3684-201ENST00000579779 74 ntBASIC3.74□□□□□ -1.81
NEFMP07197 Y_RNA.778-201ENST00000620203 90 ntBASIC3.74□□□□□ -1.81
NEFMP07197 SCARNA15.3-201ENST00000626315 122 ntBASIC3.74□□□□□ -1.81
NEFMP07197 SCARNA4.1-201ENST00000628597 123 ntBASIC3.74□□□□□ -1.81
NEFMP07197 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.73□□□□□ -1.81
NEFMP07197 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NEFMP07197 SNORA5B-201ENST00000363786 132 ntBASIC3.73□□□□□ -1.81
NEFMP07197 RNU6-324P-201ENST00000363957 106 ntBASIC3.73□□□□□ -1.81
NEFMP07197 RNU6-275P-201ENST00000364910 107 ntBASIC3.73□□□□□ -1.81
NEFMP07197 AC105272.1-201ENST00000438604 198 ntBASIC3.73□□□□□ -1.81
NEFMP07197 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.73□□□□□ -1.81
NEFMP07197 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.73□□□□□ -1.81
NEFMP07197 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.73□□□□□ -1.81
NEFMP07197 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.73□□□□□ -1.81
NEFMP07197 RNU6-436P-201ENST00000516171 114 ntBASIC3.73□□□□□ -1.81
NEFMP07197 HMGN2P15-201ENST00000585707 270 ntBASIC3.73□□□□□ -1.81
NEFMP07197 AC090115.4-201ENST00000609970 188 ntBASIC3.73□□□□□ -1.81
NEFMP07197 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
NEFMP07197 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
NEFMP07197 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NEFMP07197 AC010680.1-201ENST00000590024 3590 ntBASIC3.73□□□□□ -1.81
NEFMP07197 AC026241.1-201ENST00000517873 2142 ntBASIC3.73□□□□□ -1.81
NEFMP07197 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.72□□□□□ -1.81
NEFMP07197 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NEFMP07197 RNU6-1290P-201ENST00000362957 109 ntBASIC3.72□□□□□ -1.81
NEFMP07197 Y_RNA.415-201ENST00000384012 112 ntBASIC3.72□□□□□ -1.81
NEFMP07197 RNU6-19P-201ENST00000384718 107 ntBASIC3.72□□□□□ -1.81
NEFMP07197 RNU6-763P-201ENST00000390865 106 ntBASIC3.72□□□□□ -1.81
NEFMP07197 EBAG9P1-201ENST00000418955 543 ntBASIC3.72□□□□□ -1.81
NEFMP07197 AC091826.1-201ENST00000514065 313 ntBASIC3.72□□□□□ -1.81
NEFMP07197 Y_RNA.797-201ENST00000515977 94 ntBASIC3.72□□□□□ -1.81
NEFMP07197 RN7SKP164-201ENST00000516138 266 ntBASIC3.72□□□□□ -1.81
NEFMP07197 RNU6-344P-201ENST00000516635 111 ntBASIC3.72□□□□□ -1.81
NEFMP07197 RNU6-107P-201ENST00000516643 102 ntBASIC3.72□□□□□ -1.81
NEFMP07197 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.72□□□□□ -1.81
NEFMP07197 SNORD11B-201ENST00000607707 90 ntBASIC3.72□□□□□ -1.81
NEFMP07197 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
NEFMP07197 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
NEFMP07197 RNU6-1010P-201ENST00000362757 107 ntBASIC3.71□□□□□ -1.82
NEFMP07197 RNU6-103P-201ENST00000363686 107 ntBASIC3.71□□□□□ -1.82
NEFMP07197 RNU6-1168P-201ENST00000390831 104 ntBASIC3.71□□□□□ -1.82
NEFMP07197 RNU6-239P-201ENST00000390990 99 ntBASIC3.71□□□□□ -1.82
NEFMP07197 Y_RNA.586-201ENST00000391146 98 ntBASIC3.71□□□□□ -1.82
NEFMP07197 RNU6-381P-201ENST00000391259 108 ntBASIC3.71□□□□□ -1.82
NEFMP07197 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.71□□□□□ -1.82
NEFMP07197 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.71□□□□□ -1.82
NEFMP07197 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.71□□□□□ -1.82
NEFMP07197 SNORD116-25-201ENST00000516517 92 ntBASIC3.71□□□□□ -1.82
NEFMP07197 GTF3AP2-201ENST00000557014 266 ntBASIC3.71□□□□□ -1.82
NEFMP07197 ZNF861P-201ENST00000588126 639 ntBASIC3.71□□□□□ -1.82
NEFMP07197 RPS15AP11-201ENST00000594193 385 ntBASIC3.71□□□□□ -1.82
NEFMP07197 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
NEFMP07197 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
NEFMP07197 MIR26A1-201ENST00000362205 77 ntBASIC3.7□□□□□ -1.82
NEFMP07197 Y_RNA.81-201ENST00000362997 102 ntBASIC3.7□□□□□ -1.82
NEFMP07197 VTRNA1-1-201ENST00000363120 99 ntBASIC3.7□□□□□ -1.82
NEFMP07197 RNA5SP201-201ENST00000410316 124 ntBASIC3.7□□□□□ -1.82
NEFMP07197 RNU6-710P-201ENST00000410424 105 ntBASIC3.7□□□□□ -1.82
NEFMP07197 RNU6-735P-201ENST00000410612 107 ntBASIC3.7□□□□□ -1.82
NEFMP07197 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.7□□□□□ -1.82
NEFMP07197 RPS29P6-201ENST00000438196 145 ntBASIC3.7□□□□□ -1.82
NEFMP07197 snoU13.14-201ENST00000459372 104 ntBASIC3.7□□□□□ -1.82
NEFMP07197 RPL31P41-201ENST00000477967 372 ntBASIC3.7□□□□□ -1.82
NEFMP07197 AC136628.3-201ENST00000521868 290 ntBASIC3.7□□□□□ -1.82
NEFMP07197 AC091152.3-201ENST00000604227 325 ntBASIC3.7□□□□□ -1.82
NEFMP07197 PCGEM1.1-201ENST00000613431 131 ntBASIC3.7□□□□□ -1.82
NEFMP07197 AC005562.2-201ENST00000618264 111 ntBASIC3.7□□□□□ -1.82
NEFMP07197 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
NEFMP07197 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NEFMP07197 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NEFMP07197 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
NEFMP07197 RNU6-151P-201ENST00000364158 107 ntBASIC3.69□□□□□ -1.82
NEFMP07197 RNU6-454P-201ENST00000364292 107 ntBASIC3.69□□□□□ -1.82
NEFMP07197 MIR186-201ENST00000384988 86 ntBASIC3.69□□□□□ -1.82
NEFMP07197 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.69□□□□□ -1.82
NEFMP07197 CR769767.1-201ENST00000436337 346 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 250.4 ms