Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 OTUD4P1-201ENST00000237841 3067 ntBASIC5.65□□□□□ -1.51
NPM3O75607 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.65□□□□□ -1.51
NPM3O75607 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NPM3O75607 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.65□□□□□ -1.51
NPM3O75607 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.64□□□□□ -1.51
NPM3O75607 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPM3O75607 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPM3O75607 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPM3O75607 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPM3O75607 RNU4-32P-201ENST00000363404 141 ntBASIC5.64□□□□□ -1.51
NPM3O75607 RNU6-1072P-201ENST00000384703 107 ntBASIC5.64□□□□□ -1.51
NPM3O75607 RNU6-443P-201ENST00000384780 107 ntBASIC5.64□□□□□ -1.51
NPM3O75607 MIR452-201ENST00000385020 85 ntBASIC5.64□□□□□ -1.51
NPM3O75607 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.64□□□□□ -1.51
NPM3O75607 AC023141.11-201ENST00000508864 202 ntBASIC5.64□□□□□ -1.51
NPM3O75607 RNA5SP497-201ENST00000516081 97 ntBASIC5.64□□□□□ -1.51
NPM3O75607 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC5.64□□□□□ -1.51
NPM3O75607 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPM3O75607 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.64□□□□□ -1.51
NPM3O75607 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.64□□□□□ -1.51
NPM3O75607 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPM3O75607 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPM3O75607 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.63□□□□□ -1.51
NPM3O75607 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPM3O75607 RNU6-624P-201ENST00000363411 107 ntBASIC5.63□□□□□ -1.51
NPM3O75607 SNORA26.7-201ENST00000391288 122 ntBASIC5.63□□□□□ -1.51
NPM3O75607 RNU7-153P-201ENST00000516455 62 ntBASIC5.63□□□□□ -1.51
NPM3O75607 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.63□□□□□ -1.51
NPM3O75607 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
NPM3O75607 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPM3O75607 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPM3O75607 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPM3O75607 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPM3O75607 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NPM3O75607 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPM3O75607 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPM3O75607 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NPM3O75607 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
NPM3O75607 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NPM3O75607 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
NPM3O75607 MIR136-201ENST00000385207 82 ntBASIC5.62□□□□□ -1.51
NPM3O75607 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.62□□□□□ -1.51
NPM3O75607 AC099522.1-202ENST00000514718 367 ntBASIC5.62□□□□□ -1.51
NPM3O75607 RNA5SP73-201ENST00000516744 108 ntBASIC5.62□□□□□ -1.51
NPM3O75607 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.62□□□□□ -1.51
NPM3O75607 AC243994.1-201ENST00000618627 109 ntBASIC5.62□□□□□ -1.51
NPM3O75607 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NPM3O75607 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NPM3O75607 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC5.62□□□□□ -1.51
NPM3O75607 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
NPM3O75607 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
NPM3O75607 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.62□□□□□ -1.51
NPM3O75607 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NPM3O75607 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.61□□□□□ -1.51
NPM3O75607 Y_RNA.98-201ENST00000363109 102 ntBASIC5.61□□□□□ -1.51
NPM3O75607 Y_RNA.354-201ENST00000365448 111 ntBASIC5.61□□□□□ -1.51
NPM3O75607 RNU6-342P-201ENST00000384521 104 ntBASIC5.61□□□□□ -1.51
NPM3O75607 RNU6-913P-201ENST00000390913 95 ntBASIC5.61□□□□□ -1.51
NPM3O75607 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NPM3O75607 RNU6-602P-201ENST00000411155 105 ntBASIC5.61□□□□□ -1.51
NPM3O75607 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC5.61□□□□□ -1.51
NPM3O75607 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.61□□□□□ -1.51
NPM3O75607 AL450471.1-201ENST00000447509 127 ntBASIC5.61□□□□□ -1.51
NPM3O75607 GVINP1-202ENST00000531871 7271 ntBASIC5.61□□□□□ -1.51
NPM3O75607 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NPM3O75607 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
NPM3O75607 AP000648.3-201ENST00000623539 4507 ntBASIC5.6□□□□□ -1.51
NPM3O75607 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NPM3O75607 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NPM3O75607 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NPM3O75607 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NPM3O75607 RNU6-1067P-201ENST00000384752 107 ntBASIC5.6□□□□□ -1.51
NPM3O75607 RNU1-82P-201ENST00000390851 165 ntBASIC5.6□□□□□ -1.51
NPM3O75607 AL034345.1-201ENST00000407768 123 ntBASIC5.6□□□□□ -1.51
NPM3O75607 AC018868.1-201ENST00000491307 315 ntBASIC5.6□□□□□ -1.51
NPM3O75607 RNU6-557P-201ENST00000516842 110 ntBASIC5.6□□□□□ -1.51
NPM3O75607 Y_RNA.788-201ENST00000622394 112 ntBASIC5.6□□□□□ -1.51
NPM3O75607 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.6□□□□□ -1.51
NPM3O75607 AC007336.1-201ENST00000576365 3828 ntBASIC5.6□□□□□ -1.51
NPM3O75607 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPM3O75607 AC005005.4-201ENST00000623789 16698 ntBASIC5.59□□□□□ -1.51
NPM3O75607 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.59□□□□□ -1.51
NPM3O75607 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPM3O75607 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPM3O75607 SNORD114-10-201ENST00000363409 72 ntBASIC5.59□□□□□ -1.51
NPM3O75607 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.59□□□□□ -1.51
NPM3O75607 AC069285.2-201ENST00000440210 275 ntBASIC5.59□□□□□ -1.51
NPM3O75607 SNORD67.1-201ENST00000516618 108 ntBASIC5.59□□□□□ -1.51
NPM3O75607 AC110741.2-201ENST00000605278 268 ntBASIC5.59□□□□□ -1.51
NPM3O75607 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NPM3O75607 AC092435.4-201ENST00000623012 4159 ntBASIC5.59□□□□□ -1.51
NPM3O75607 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.58□□□□□ -1.52
NPM3O75607 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.58□□□□□ -1.52
NPM3O75607 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPM3O75607 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
NPM3O75607 AL031595.2-201ENST00000624215 19071 ntBASIC5.58□□□□□ -1.52
NPM3O75607 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPM3O75607 MIR516B2-201ENST00000385190 85 ntBASIC5.58□□□□□ -1.52
NPM3O75607 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.58□□□□□ -1.52
NPM3O75607 snoU13.11-201ENST00000459219 104 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms