Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.43□□□□□ -1.86
CPNE3O75131 AC093259.1-201ENST00000509755 300 ntBASIC3.43□□□□□ -1.86
CPNE3O75131 SNORA4.4-201ENST00000515921 135 ntBASIC3.43□□□□□ -1.86
CPNE3O75131 AC093732.2-201ENST00000607950 274 ntBASIC3.43□□□□□ -1.86
CPNE3O75131 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CPNE3O75131 MIR7153-201ENST00000637758 57 ntBASIC3.43□□□□□ -1.86
CPNE3O75131 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.43□□□□□ -1.86
CPNE3O75131 AC100821.1-201ENST00000523153 2479 ntBASIC3.43□□□□□ -1.86
CPNE3O75131 CEP170P1-201ENST00000502249 4587 ntBASIC3.43□□□□□ -1.86
CPNE3O75131 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CPNE3O75131 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CPNE3O75131 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CPNE3O75131 RNU6-674P-201ENST00000363831 107 ntBASIC3.42□□□□□ -1.86
CPNE3O75131 RNU4-41P-201ENST00000364426 143 ntBASIC3.42□□□□□ -1.86
CPNE3O75131 RNU6-136P-201ENST00000384663 107 ntBASIC3.42□□□□□ -1.86
CPNE3O75131 AC123900.1-201ENST00000420390 96 ntBASIC3.42□□□□□ -1.86
CPNE3O75131 ARF4P2-201ENST00000430209 526 ntBASIC3.42□□□□□ -1.86
CPNE3O75131 AC107934.2-201ENST00000518653 310 ntBASIC3.42□□□□□ -1.86
CPNE3O75131 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
CPNE3O75131 MIR4438-201ENST00000585271 93 ntBASIC3.42□□□□□ -1.86
CPNE3O75131 AL355297.2-201ENST00000604792 129 ntBASIC3.42□□□□□ -1.86
CPNE3O75131 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.42□□□□□ -1.86
CPNE3O75131 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.42□□□□□ -1.86
CPNE3O75131 AC012640.5-201ENST00000623897 319 ntBASIC3.42□□□□□ -1.86
CPNE3O75131 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.42□□□□□ -1.86
CPNE3O75131 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CPNE3O75131 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CPNE3O75131 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CPNE3O75131 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CPNE3O75131 SNORA40-201ENST00000388090 126 ntBASIC3.41□□□□□ -1.86
CPNE3O75131 RNA5SP496-201ENST00000391240 109 ntBASIC3.41□□□□□ -1.86
CPNE3O75131 AL512604.1-201ENST00000404812 257 ntBASIC3.41□□□□□ -1.86
CPNE3O75131 Y_RNA.622-201ENST00000411091 108 ntBASIC3.41□□□□□ -1.86
CPNE3O75131 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.41□□□□□ -1.86
CPNE3O75131 AC025750.2-201ENST00000442609 450 ntBASIC3.41□□□□□ -1.86
CPNE3O75131 NDUFB9P3-201ENST00000521269 501 ntBASIC3.41□□□□□ -1.86
CPNE3O75131 AC112693.2-201ENST00000556538 232 ntBASIC3.41□□□□□ -1.86
CPNE3O75131 AP003355.3-201ENST00000623465 114 ntBASIC3.41□□□□□ -1.86
CPNE3O75131 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
CPNE3O75131 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CPNE3O75131 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.4□□□□□ -1.86
CPNE3O75131 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
CPNE3O75131 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
CPNE3O75131 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.4□□□□□ -1.87
CPNE3O75131 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.4□□□□□ -1.87
CPNE3O75131 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CPNE3O75131 RNU1-22P-201ENST00000363334 158 ntBASIC3.4□□□□□ -1.87
CPNE3O75131 Y_RNA.332-201ENST00000365271 113 ntBASIC3.4□□□□□ -1.87
CPNE3O75131 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.4□□□□□ -1.87
CPNE3O75131 SNORA72-201ENST00000384339 132 ntBASIC3.4□□□□□ -1.87
CPNE3O75131 Y_RNA.521-201ENST00000384560 114 ntBASIC3.4□□□□□ -1.87
CPNE3O75131 MIR1253-201ENST00000408273 105 ntBASIC3.4□□□□□ -1.87
CPNE3O75131 MIR1278-201ENST00000408753 81 ntBASIC3.4□□□□□ -1.87
CPNE3O75131 MTATP6P29-201ENST00000415057 132 ntBASIC3.4□□□□□ -1.87
CPNE3O75131 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CPNE3O75131 AC097462.1-201ENST00000514125 324 ntBASIC3.4□□□□□ -1.87
CPNE3O75131 RNU6-479P-201ENST00000516348 105 ntBASIC3.4□□□□□ -1.87
CPNE3O75131 LARP7P3-201ENST00000579888 337 ntBASIC3.4□□□□□ -1.87
CPNE3O75131 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.4□□□□□ -1.87
CPNE3O75131 AL161756.2-201ENST00000604597 246 ntBASIC3.4□□□□□ -1.87
CPNE3O75131 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CPNE3O75131 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CPNE3O75131 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.39□□□□□ -1.87
CPNE3O75131 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
CPNE3O75131 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.39□□□□□ -1.87
CPNE3O75131 AC073346.2-201ENST00000624724 2058 ntBASIC3.39□□□□□ -1.87
CPNE3O75131 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.39□□□□□ -1.87
CPNE3O75131 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CPNE3O75131 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CPNE3O75131 SNORD45.3-201ENST00000363836 72 ntBASIC3.39□□□□□ -1.87
CPNE3O75131 Y_RNA.587-201ENST00000391210 103 ntBASIC3.39□□□□□ -1.87
CPNE3O75131 RNU4-43P-201ENST00000410628 137 ntBASIC3.39□□□□□ -1.87
CPNE3O75131 RNU6-313P-201ENST00000516317 112 ntBASIC3.39□□□□□ -1.87
CPNE3O75131 SNORA70.18-201ENST00000516696 98 ntBASIC3.39□□□□□ -1.87
CPNE3O75131 RNU7-172P-201ENST00000517125 64 ntBASIC3.39□□□□□ -1.87
CPNE3O75131 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.39□□□□□ -1.87
CPNE3O75131 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.39□□□□□ -1.87
CPNE3O75131 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.39□□□□□ -1.87
CPNE3O75131 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.39□□□□□ -1.87
CPNE3O75131 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.39□□□□□ -1.87
CPNE3O75131 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CPNE3O75131 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CPNE3O75131 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
CPNE3O75131 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CPNE3O75131 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CPNE3O75131 ZNF702P-202ENST00000434269 1966 ntBASIC3.38□□□□□ -1.87
CPNE3O75131 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.38□□□□□ -1.87
CPNE3O75131 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CPNE3O75131 SNORA20-201ENST00000384662 132 ntBASIC3.38□□□□□ -1.87
CPNE3O75131 RNVU1-14-201ENST00000384770 164 ntBASIC3.38□□□□□ -1.87
CPNE3O75131 MIR561-201ENST00000385216 97 ntBASIC3.38□□□□□ -1.87
CPNE3O75131 RNU6-220P-201ENST00000390919 107 ntBASIC3.38□□□□□ -1.87
CPNE3O75131 RNU6-1154P-201ENST00000391001 104 ntBASIC3.38□□□□□ -1.87
CPNE3O75131 SNORA79-201ENST00000408376 140 ntBASIC3.38□□□□□ -1.87
CPNE3O75131 MIR1289-1-201ENST00000408836 144 ntBASIC3.38□□□□□ -1.87
CPNE3O75131 RNU2-48P-201ENST00000410694 191 ntBASIC3.38□□□□□ -1.87
CPNE3O75131 RN7SKP101-201ENST00000411376 320 ntBASIC3.38□□□□□ -1.87
CPNE3O75131 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.38□□□□□ -1.87
CPNE3O75131 RN7SL601P-201ENST00000471221 293 ntBASIC3.38□□□□□ -1.87
CPNE3O75131 RPS29P21-201ENST00000496272 170 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms