Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HCFC2Q9Y5Z7 SNORD87-201ENST00000364849 89 ntBASIC3.2□□□□□ -1.9
HCFC2Q9Y5Z7 MIR186-201ENST00000384988 86 ntBASIC3.2□□□□□ -1.9
HCFC2Q9Y5Z7 AL133475.1-201ENST00000404414 305 ntBASIC3.2□□□□□ -1.9
HCFC2Q9Y5Z7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.2□□□□□ -1.9
HCFC2Q9Y5Z7 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.2□□□□□ -1.9
HCFC2Q9Y5Z7 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.2□□□□□ -1.9
HCFC2Q9Y5Z7 AC083906.5-201ENST00000503722 328 ntBASIC3.2□□□□□ -1.9
HCFC2Q9Y5Z7 SNORA70.12-201ENST00000516084 153 ntBASIC3.2□□□□□ -1.9
HCFC2Q9Y5Z7 RNU2-44P-201ENST00000516795 194 ntBASIC3.2□□□□□ -1.9
HCFC2Q9Y5Z7 AP000867.2-201ENST00000532468 320 ntBASIC3.2□□□□□ -1.9
HCFC2Q9Y5Z7 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.2□□□□□ -1.9
HCFC2Q9Y5Z7 DNAJC19P2-201ENST00000593340 302 ntBASIC3.2□□□□□ -1.9
HCFC2Q9Y5Z7 uc_338.14-201ENST00000613162 166 ntBASIC3.2□□□□□ -1.9
HCFC2Q9Y5Z7 Y_RNA.802-201ENST00000614892 130 ntBASIC3.2□□□□□ -1.9
HCFC2Q9Y5Z7 U6.115-201ENST00000636045 103 ntBASIC3.2□□□□□ -1.9
HCFC2Q9Y5Z7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
HCFC2Q9Y5Z7 AC010332.2-201ENST00000613083 1904 ntBASIC3.2□□□□□ -1.9
HCFC2Q9Y5Z7 AL159152.1-201ENST00000635019 2587 ntBASIC3.2□□□□□ -1.9
HCFC2Q9Y5Z7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
HCFC2Q9Y5Z7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HCFC2Q9Y5Z7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HCFC2Q9Y5Z7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 snoU2_19.4-201ENST00000364329 80 ntBASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 Y_RNA.310-201ENST00000365063 113 ntBASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 SNORA18.2-201ENST00000383865 132 ntBASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 MIR616-201ENST00000385293 97 ntBASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 SNORA40-201ENST00000388090 126 ntBASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 RNU2-49P-201ENST00000410666 184 ntBASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 AC108938.1-201ENST00000451204 136 ntBASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 UBL5P3-201ENST00000475112 231 ntBASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 SRIP1-201ENST00000489235 288 ntBASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 AC079598.5-201ENST00000547460 117 ntBASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 AC090616.3-201ENST00000582184 217 ntBASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 MIR4435-1-201ENST00000582552 80 ntBASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 U7.8-201ENST00000619968 63 ntBASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.19□□□□□ -1.9
HCFC2Q9Y5Z7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HCFC2Q9Y5Z7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HCFC2Q9Y5Z7 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.18□□□□□ -1.9
HCFC2Q9Y5Z7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
HCFC2Q9Y5Z7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HCFC2Q9Y5Z7 RNU6-144P-201ENST00000383951 107 ntBASIC3.18□□□□□ -1.9
HCFC2Q9Y5Z7 MIR586-201ENST00000385035 97 ntBASIC3.18□□□□□ -1.9
HCFC2Q9Y5Z7 RNA5SP184-201ENST00000411071 108 ntBASIC3.18□□□□□ -1.9
HCFC2Q9Y5Z7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.18□□□□□ -1.9
HCFC2Q9Y5Z7 AC109810.1-201ENST00000534066 224 ntBASIC3.18□□□□□ -1.9
HCFC2Q9Y5Z7 AC025281.1-201ENST00000567026 265 ntBASIC3.18□□□□□ -1.9
HCFC2Q9Y5Z7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HCFC2Q9Y5Z7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HCFC2Q9Y5Z7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
HCFC2Q9Y5Z7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.18□□□□□ -1.9
HCFC2Q9Y5Z7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HCFC2Q9Y5Z7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.17□□□□□ -1.9
HCFC2Q9Y5Z7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.17□□□□□ -1.9
HCFC2Q9Y5Z7 AC068700.1-201ENST00000565862 3754 ntBASIC3.17□□□□□ -1.9
HCFC2Q9Y5Z7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HCFC2Q9Y5Z7 AC062016.1-201ENST00000355719 319 ntBASIC3.17□□□□□ -1.9
HCFC2Q9Y5Z7 RNA5SP205-201ENST00000364653 136 ntBASIC3.17□□□□□ -1.9
HCFC2Q9Y5Z7 RPL30P13-201ENST00000418873 348 ntBASIC3.17□□□□□ -1.9
HCFC2Q9Y5Z7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.17□□□□□ -1.9
HCFC2Q9Y5Z7 YWHAEP4-201ENST00000505390 198 ntBASIC3.17□□□□□ -1.9
HCFC2Q9Y5Z7 AC022616.8-201ENST00000533569 253 ntBASIC3.17□□□□□ -1.9
HCFC2Q9Y5Z7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.17□□□□□ -1.9
HCFC2Q9Y5Z7 AL365222.1-201ENST00000614661 98 ntBASIC3.17□□□□□ -1.9
HCFC2Q9Y5Z7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.17□□□□□ -1.9
HCFC2Q9Y5Z7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HCFC2Q9Y5Z7 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.17□□□□□ -1.9
HCFC2Q9Y5Z7 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HCFC2Q9Y5Z7 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
HCFC2Q9Y5Z7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HCFC2Q9Y5Z7 GABRG2-229ENST00000641017 3628 ntBASIC3.16□□□□□ -1.9
HCFC2Q9Y5Z7 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
HCFC2Q9Y5Z7 AC073325.2-201ENST00000339545 159 ntBASIC3.16□□□□□ -1.9
HCFC2Q9Y5Z7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HCFC2Q9Y5Z7 Y_RNA.293-201ENST00000364908 93 ntBASIC3.16□□□□□ -1.9
HCFC2Q9Y5Z7 Y_RNA.337-201ENST00000365312 102 ntBASIC3.16□□□□□ -1.9
HCFC2Q9Y5Z7 Y_RNA.341-201ENST00000365341 102 ntBASIC3.16□□□□□ -1.9
HCFC2Q9Y5Z7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HCFC2Q9Y5Z7 RNA5SP38-201ENST00000410750 119 ntBASIC3.16□□□□□ -1.9
HCFC2Q9Y5Z7 RPL23AP58-201ENST00000440453 469 ntBASIC3.16□□□□□ -1.9
HCFC2Q9Y5Z7 SCGB1D5P-201ENST00000515134 247 ntBASIC3.16□□□□□ -1.9
HCFC2Q9Y5Z7 RNU1-117P-201ENST00000517041 158 ntBASIC3.16□□□□□ -1.9
HCFC2Q9Y5Z7 SCARNA20.6-201ENST00000517251 106 ntBASIC3.16□□□□□ -1.9
HCFC2Q9Y5Z7 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.16□□□□□ -1.9
HCFC2Q9Y5Z7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.16□□□□□ -1.9
HCFC2Q9Y5Z7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 181.1 ms