Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 AC103975.1-201ENST00000482506 483 ntBASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 AC108729.3-201ENST00000513484 108 ntBASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 RNU6-388P-201ENST00000517012 105 ntBASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 RNU6-389P-201ENST00000517048 105 ntBASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 AC004486.1-201ENST00000546846 233 ntBASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 MIR5695-201ENST00000579717 85 ntBASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 MIR3670-2-201ENST00000582974 65 ntBASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 MIR3670-1-201ENST00000584160 65 ntBASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 MIR3670-3-201ENST00000584855 65 ntBASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 RPL17P51-201ENST00000605218 238 ntBASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 MIR3670-4-201ENST00000612260 65 ntBASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NR2E3Q9Y5X4 MIR26A1-201ENST00000362205 77 ntBASIC2.89□□□□□ -1.95
NR2E3Q9Y5X4 Y_RNA.118-201ENST00000363300 101 ntBASIC2.89□□□□□ -1.95
NR2E3Q9Y5X4 RNU6-873P-201ENST00000363833 107 ntBASIC2.89□□□□□ -1.95
NR2E3Q9Y5X4 Y_RNA.350-201ENST00000365409 98 ntBASIC2.89□□□□□ -1.95
NR2E3Q9Y5X4 RNU6-1145P-201ENST00000384246 107 ntBASIC2.89□□□□□ -1.95
NR2E3Q9Y5X4 MT-TR-201ENST00000387439 65 ntBASIC2.89□□□□□ -1.95
NR2E3Q9Y5X4 SNORD78.2-201ENST00000391076 69 ntBASIC2.89□□□□□ -1.95
NR2E3Q9Y5X4 MRPL35P1-201ENST00000404272 572 ntBASIC2.89□□□□□ -1.95
NR2E3Q9Y5X4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.89□□□□□ -1.95
NR2E3Q9Y5X4 RNU2-20P-201ENST00000410425 191 ntBASIC2.89□□□□□ -1.95
NR2E3Q9Y5X4 RNU2-25P-201ENST00000411041 191 ntBASIC2.89□□□□□ -1.95
NR2E3Q9Y5X4 RNU6-1001P-201ENST00000411265 100 ntBASIC2.89□□□□□ -1.95
NR2E3Q9Y5X4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.89□□□□□ -1.95
NR2E3Q9Y5X4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.89□□□□□ -1.95
NR2E3Q9Y5X4 AL445687.1-201ENST00000439946 251 ntBASIC2.89□□□□□ -1.95
NR2E3Q9Y5X4 AL161788.1-201ENST00000441805 169 ntBASIC2.89□□□□□ -1.95
NR2E3Q9Y5X4 TRBVB-201ENST00000477100 408 ntBASIC2.89□□□□□ -1.95
NR2E3Q9Y5X4 HSPE1P18-201ENST00000517602 280 ntBASIC2.89□□□□□ -1.95
NR2E3Q9Y5X4 AC018630.3-201ENST00000542637 96 ntBASIC2.89□□□□□ -1.95
NR2E3Q9Y5X4 MIR3128-201ENST00000581957 66 ntBASIC2.89□□□□□ -1.95
NR2E3Q9Y5X4 AC005357.1-201ENST00000588399 301 ntBASIC2.89□□□□□ -1.95
NR2E3Q9Y5X4 AC012433.1-201ENST00000588916 398 ntBASIC2.89□□□□□ -1.95
NR2E3Q9Y5X4 AL449363.1-201ENST00000617815 186 ntBASIC2.89□□□□□ -1.95
NR2E3Q9Y5X4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.89□□□□□ -1.95
NR2E3Q9Y5X4 LINC02555-201ENST00000563933 1951 ntBASIC2.89□□□□□ -1.95
NR2E3Q9Y5X4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
NR2E3Q9Y5X4 RNU6-879P-201ENST00000364328 108 ntBASIC2.88□□□□□ -1.95
NR2E3Q9Y5X4 RNU6-937P-201ENST00000384325 106 ntBASIC2.88□□□□□ -1.95
NR2E3Q9Y5X4 MIR549A-201ENST00000385268 96 ntBASIC2.88□□□□□ -1.95
NR2E3Q9Y5X4 SNORA12-201ENST00000391162 147 ntBASIC2.88□□□□□ -1.95
NR2E3Q9Y5X4 RNU2-63P-201ENST00000410792 194 ntBASIC2.88□□□□□ -1.95
NR2E3Q9Y5X4 Z82209.1-201ENST00000422141 2135 ntBASIC2.88□□□□□ -1.95
NR2E3Q9Y5X4 RN7SKP49-201ENST00000516675 260 ntBASIC2.88□□□□□ -1.95
NR2E3Q9Y5X4 AC093023.1-201ENST00000547375 507 ntBASIC2.88□□□□□ -1.95
NR2E3Q9Y5X4 MIR3668-201ENST00000582138 75 ntBASIC2.88□□□□□ -1.95
NR2E3Q9Y5X4 AC090616.3-201ENST00000582184 217 ntBASIC2.88□□□□□ -1.95
NR2E3Q9Y5X4 AC090115.4-201ENST00000609970 188 ntBASIC2.88□□□□□ -1.95
NR2E3Q9Y5X4 AL357075.2-201ENST00000614906 189 ntBASIC2.88□□□□□ -1.95
NR2E3Q9Y5X4 AC005562.2-201ENST00000618264 111 ntBASIC2.88□□□□□ -1.95
NR2E3Q9Y5X4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.88□□□□□ -1.95
NR2E3Q9Y5X4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.88□□□□□ -1.95
NR2E3Q9Y5X4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NR2E3Q9Y5X4 Y_RNA.60-201ENST00000362831 98 ntBASIC2.87□□□□□ -1.95
NR2E3Q9Y5X4 Y_RNA.140-201ENST00000363474 103 ntBASIC2.87□□□□□ -1.95
NR2E3Q9Y5X4 RNU6-102P-201ENST00000384485 104 ntBASIC2.87□□□□□ -1.95
NR2E3Q9Y5X4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
NR2E3Q9Y5X4 Y_RNA.581-201ENST00000391017 97 ntBASIC2.87□□□□□ -1.95
NR2E3Q9Y5X4 SNORD12B-201ENST00000410433 91 ntBASIC2.87□□□□□ -1.95
NR2E3Q9Y5X4 AC092427.1-202ENST00000430569 476 ntBASIC2.87□□□□□ -1.95
NR2E3Q9Y5X4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.87□□□□□ -1.95
NR2E3Q9Y5X4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.87□□□□□ -1.95
NR2E3Q9Y5X4 RNU6-1053P-201ENST00000515930 101 ntBASIC2.87□□□□□ -1.95
NR2E3Q9Y5X4 RNA5SP320-201ENST00000516263 124 ntBASIC2.87□□□□□ -1.95
NR2E3Q9Y5X4 SNORA25.14-201ENST00000516481 132 ntBASIC2.87□□□□□ -1.95
NR2E3Q9Y5X4 Y_RNA.713-201ENST00000517013 96 ntBASIC2.87□□□□□ -1.95
NR2E3Q9Y5X4 MIR4423-201ENST00000580922 80 ntBASIC2.87□□□□□ -1.95
NR2E3Q9Y5X4 TCL6_2.1-201ENST00000615162 119 ntBASIC2.87□□□□□ -1.95
NR2E3Q9Y5X4 MIR376A1-201ENST00000616574 68 ntBASIC2.87□□□□□ -1.95
NR2E3Q9Y5X4 SDR42E1P4-201ENST00000620894 481 ntBASIC2.87□□□□□ -1.95
NR2E3Q9Y5X4 AC078938.1-201ENST00000620993 318 ntBASIC2.87□□□□□ -1.95
NR2E3Q9Y5X4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
NR2E3Q9Y5X4 Y_RNA.16-201ENST00000362421 102 ntBASIC2.86□□□□□ -1.95
NR2E3Q9Y5X4 RNU6-944P-201ENST00000364023 107 ntBASIC2.86□□□□□ -1.95
NR2E3Q9Y5X4 SNORA25.6-201ENST00000364121 118 ntBASIC2.86□□□□□ -1.95
NR2E3Q9Y5X4 RNU6-1180P-201ENST00000364935 107 ntBASIC2.86□□□□□ -1.95
NR2E3Q9Y5X4 RNU6-926P-201ENST00000384075 107 ntBASIC2.86□□□□□ -1.95
NR2E3Q9Y5X4 Y_RNA.541-201ENST00000384640 113 ntBASIC2.86□□□□□ -1.95
NR2E3Q9Y5X4 MIR1294-201ENST00000408503 142 ntBASIC2.86□□□□□ -1.95
NR2E3Q9Y5X4 AC027124.2-201ENST00000428249 105 ntBASIC2.86□□□□□ -1.95
NR2E3Q9Y5X4 AC107222.1-201ENST00000510899 637 ntBASIC2.86□□□□□ -1.95
NR2E3Q9Y5X4 RNU6-1023P-201ENST00000516137 106 ntBASIC2.86□□□□□ -1.95
NR2E3Q9Y5X4 SNORA48.11-201ENST00000517015 89 ntBASIC2.86□□□□□ -1.95
NR2E3Q9Y5X4 AC010900.2-201ENST00000604508 210 ntBASIC2.86□□□□□ -1.95
NR2E3Q9Y5X4 Y_RNA.772-201ENST00000606692 102 ntBASIC2.86□□□□□ -1.95
NR2E3Q9Y5X4 AC010999.1-201ENST00000611856 324 ntBASIC2.86□□□□□ -1.95
NR2E3Q9Y5X4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NR2E3Q9Y5X4 RNU1-62P-201ENST00000362599 164 ntBASIC2.85□□□□□ -1.95
NR2E3Q9Y5X4 RNU6-961P-201ENST00000363893 105 ntBASIC2.85□□□□□ -1.95
NR2E3Q9Y5X4 Y_RNA.237-201ENST00000364439 102 ntBASIC2.85□□□□□ -1.95
NR2E3Q9Y5X4 RNU1-91P-201ENST00000364746 163 ntBASIC2.85□□□□□ -1.95
NR2E3Q9Y5X4 Y_RNA.508-201ENST00000384502 114 ntBASIC2.85□□□□□ -1.95
NR2E3Q9Y5X4 AC005002.2-201ENST00000438228 269 ntBASIC2.85□□□□□ -1.95
NR2E3Q9Y5X4 HSPE1P25-201ENST00000455484 251 ntBASIC2.85□□□□□ -1.95
NR2E3Q9Y5X4 RN7SL297P-201ENST00000483161 293 ntBASIC2.85□□□□□ -1.95
NR2E3Q9Y5X4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.85□□□□□ -1.95
NR2E3Q9Y5X4 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.85□□□□□ -1.95
NR2E3Q9Y5X4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms