Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 AC016717.1-201ENST00000448918 286 ntBASIC2.95□□□□□ -1.94
PCDHA9Q9Y5H5 AP004217.1-201ENST00000480579 346 ntBASIC2.95□□□□□ -1.94
PCDHA9Q9Y5H5 RN7SL20P-201ENST00000488827 297 ntBASIC2.95□□□□□ -1.94
PCDHA9Q9Y5H5 AP005660.1-201ENST00000522972 293 ntBASIC2.95□□□□□ -1.94
PCDHA9Q9Y5H5 CBX3P4-201ENST00000538909 354 ntBASIC2.95□□□□□ -1.94
PCDHA9Q9Y5H5 PRELID2P1-201ENST00000552837 301 ntBASIC2.95□□□□□ -1.94
PCDHA9Q9Y5H5 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.95□□□□□ -1.94
PCDHA9Q9Y5H5 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.95□□□□□ -1.94
PCDHA9Q9Y5H5 MIR92B-201ENST00000607575 96 ntBASIC2.95□□□□□ -1.94
PCDHA9Q9Y5H5 AC090115.4-201ENST00000609970 188 ntBASIC2.95□□□□□ -1.94
PCDHA9Q9Y5H5 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
PCDHA9Q9Y5H5 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
PCDHA9Q9Y5H5 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.94□□□□□ -1.94
PCDHA9Q9Y5H5 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PCDHA9Q9Y5H5 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDHA9Q9Y5H5 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.94□□□□□ -1.94
PCDHA9Q9Y5H5 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PCDHA9Q9Y5H5 RNU6-271P-201ENST00000363858 105 ntBASIC2.94□□□□□ -1.94
PCDHA9Q9Y5H5 RNA5SP125-201ENST00000364843 120 ntBASIC2.94□□□□□ -1.94
PCDHA9Q9Y5H5 Y_RNA.456-201ENST00000384232 111 ntBASIC2.94□□□□□ -1.94
PCDHA9Q9Y5H5 SNORD14D-201ENST00000384390 87 ntBASIC2.94□□□□□ -1.94
PCDHA9Q9Y5H5 MIR34B-201ENST00000385076 84 ntBASIC2.94□□□□□ -1.94
PCDHA9Q9Y5H5 MIR873-201ENST00000401120 77 ntBASIC2.94□□□□□ -1.94
PCDHA9Q9Y5H5 Y_RNA.793-201ENST00000411222 111 ntBASIC2.94□□□□□ -1.94
PCDHA9Q9Y5H5 MTCO1P44-201ENST00000441935 243 ntBASIC2.94□□□□□ -1.94
PCDHA9Q9Y5H5 AL357134.1-201ENST00000445848 426 ntBASIC2.94□□□□□ -1.94
PCDHA9Q9Y5H5 AC018868.1-201ENST00000491307 315 ntBASIC2.94□□□□□ -1.94
PCDHA9Q9Y5H5 AC025647.1-201ENST00000517879 253 ntBASIC2.94□□□□□ -1.94
PCDHA9Q9Y5H5 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.94□□□□□ -1.94
PCDHA9Q9Y5H5 U4atac.1-201ENST00000618345 95 ntBASIC2.94□□□□□ -1.94
PCDHA9Q9Y5H5 MIR622-201ENST00000638396 96 ntBASIC2.94□□□□□ -1.94
PCDHA9Q9Y5H5 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
PCDHA9Q9Y5H5 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PCDHA9Q9Y5H5 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PCDHA9Q9Y5H5 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PCDHA9Q9Y5H5 RNU6-801P-201ENST00000364087 105 ntBASIC2.93□□□□□ -1.94
PCDHA9Q9Y5H5 RNU6-743P-201ENST00000364151 106 ntBASIC2.93□□□□□ -1.94
PCDHA9Q9Y5H5 SNORA20B-201ENST00000384220 132 ntBASIC2.93□□□□□ -1.94
PCDHA9Q9Y5H5 SNORD15B-201ENST00000384714 146 ntBASIC2.93□□□□□ -1.94
PCDHA9Q9Y5H5 AL355796.1-201ENST00000406706 323 ntBASIC2.93□□□□□ -1.94
PCDHA9Q9Y5H5 RNA5SP274-201ENST00000410484 108 ntBASIC2.93□□□□□ -1.94
PCDHA9Q9Y5H5 BMS1P22-201ENST00000414726 313 ntBASIC2.93□□□□□ -1.94
PCDHA9Q9Y5H5 PIGPP3-201ENST00000425307 415 ntBASIC2.93□□□□□ -1.94
PCDHA9Q9Y5H5 AC092427.1-202ENST00000430569 476 ntBASIC2.93□□□□□ -1.94
PCDHA9Q9Y5H5 SNORD65B-201ENST00000459126 73 ntBASIC2.93□□□□□ -1.94
PCDHA9Q9Y5H5 Y_RNA.637-201ENST00000459424 114 ntBASIC2.93□□□□□ -1.94
PCDHA9Q9Y5H5 RN7SL807P-201ENST00000470923 297 ntBASIC2.93□□□□□ -1.94
PCDHA9Q9Y5H5 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.93□□□□□ -1.94
PCDHA9Q9Y5H5 AC090616.3-201ENST00000582184 217 ntBASIC2.93□□□□□ -1.94
PCDHA9Q9Y5H5 UBL5P2-201ENST00000583788 219 ntBASIC2.93□□□□□ -1.94
PCDHA9Q9Y5H5 MIR4506-201ENST00000584693 77 ntBASIC2.93□□□□□ -1.94
PCDHA9Q9Y5H5 AC004832.5-201ENST00000608677 401 ntBASIC2.93□□□□□ -1.94
PCDHA9Q9Y5H5 AC006435.5-201ENST00000624486 112 ntBASIC2.93□□□□□ -1.94
PCDHA9Q9Y5H5 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
PCDHA9Q9Y5H5 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PCDHA9Q9Y5H5 FAM35CP-201ENST00000554755 2470 ntBASIC2.93□□□□□ -1.94
PCDHA9Q9Y5H5 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PCDHA9Q9Y5H5 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCDHA9Q9Y5H5 SNORA63.1-201ENST00000362493 131 ntBASIC2.92□□□□□ -1.94
PCDHA9Q9Y5H5 Y_RNA.304-201ENST00000365011 112 ntBASIC2.92□□□□□ -1.94
PCDHA9Q9Y5H5 SNORA25B-201ENST00000365507 128 ntBASIC2.92□□□□□ -1.94
PCDHA9Q9Y5H5 MIR181B1-201ENST00000385240 110 ntBASIC2.92□□□□□ -1.94
PCDHA9Q9Y5H5 SNORA40.19-201ENST00000390846 128 ntBASIC2.92□□□□□ -1.94
PCDHA9Q9Y5H5 RN7SKP123-201ENST00000410732 291 ntBASIC2.92□□□□□ -1.94
PCDHA9Q9Y5H5 BTF3P11-201ENST00000426582 477 ntBASIC2.92□□□□□ -1.94
PCDHA9Q9Y5H5 AL121890.1-201ENST00000435457 205 ntBASIC2.92□□□□□ -1.94
PCDHA9Q9Y5H5 RPL23AP7-203ENST00000449021 469 ntBASIC2.92□□□□□ -1.94
PCDHA9Q9Y5H5 HSPE1P13-201ENST00000451143 297 ntBASIC2.92□□□□□ -1.94
PCDHA9Q9Y5H5 PRELID3BP1-201ENST00000457142 540 ntBASIC2.92□□□□□ -1.94
PCDHA9Q9Y5H5 AC010531.2-201ENST00000465012 153 ntBASIC2.92□□□□□ -1.94
PCDHA9Q9Y5H5 RN7SL633P-201ENST00000488974 297 ntBASIC2.92□□□□□ -1.94
PCDHA9Q9Y5H5 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.92□□□□□ -1.94
PCDHA9Q9Y5H5 AC025754.2-201ENST00000606491 432 ntBASIC2.92□□□□□ -1.94
PCDHA9Q9Y5H5 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.92□□□□□ -1.94
PCDHA9Q9Y5H5 AL008718.3-201ENST00000610217 321 ntBASIC2.92□□□□□ -1.94
PCDHA9Q9Y5H5 FTX_2.1-201ENST00000618816 94 ntBASIC2.92□□□□□ -1.94
PCDHA9Q9Y5H5 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.92□□□□□ -1.94
PCDHA9Q9Y5H5 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.92□□□□□ -1.94
PCDHA9Q9Y5H5 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PCDHA9Q9Y5H5 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PCDHA9Q9Y5H5 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
PCDHA9Q9Y5H5 SNORA27.1-201ENST00000362604 124 ntBASIC2.91□□□□□ -1.94
PCDHA9Q9Y5H5 Y_RNA.262-201ENST00000364641 102 ntBASIC2.91□□□□□ -1.94
PCDHA9Q9Y5H5 RNU6-1180P-201ENST00000364935 107 ntBASIC2.91□□□□□ -1.94
PCDHA9Q9Y5H5 Y_RNA.310-201ENST00000365063 113 ntBASIC2.91□□□□□ -1.94
PCDHA9Q9Y5H5 RNU6-1240P-201ENST00000365155 104 ntBASIC2.91□□□□□ -1.94
PCDHA9Q9Y5H5 Y_RNA.341-201ENST00000365341 102 ntBASIC2.91□□□□□ -1.94
PCDHA9Q9Y5H5 RNU6-209P-201ENST00000384118 107 ntBASIC2.91□□□□□ -1.94
PCDHA9Q9Y5H5 Y_RNA.555-201ENST00000384673 110 ntBASIC2.91□□□□□ -1.94
PCDHA9Q9Y5H5 RNU6-855P-201ENST00000410395 104 ntBASIC2.91□□□□□ -1.94
PCDHA9Q9Y5H5 RPS29P6-201ENST00000438196 145 ntBASIC2.91□□□□□ -1.94
PCDHA9Q9Y5H5 RNA5SP385-201ENST00000515947 110 ntBASIC2.91□□□□□ -1.94
PCDHA9Q9Y5H5 RNU6-667P-201ENST00000517186 102 ntBASIC2.91□□□□□ -1.94
PCDHA9Q9Y5H5 AC024405.2-202ENST00000532731 184 ntBASIC2.91□□□□□ -1.94
PCDHA9Q9Y5H5 MIR5004-201ENST00000579078 107 ntBASIC2.91□□□□□ -1.94
PCDHA9Q9Y5H5 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.91□□□□□ -1.94
PCDHA9Q9Y5H5 AC013412.1-201ENST00000610687 192 ntBASIC2.91□□□□□ -1.94
PCDHA9Q9Y5H5 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.91□□□□□ -1.94
PCDHA9Q9Y5H5 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.91□□□□□ -1.94
PCDHA9Q9Y5H5 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms