Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 MIR492-201ENST00000638676 116 ntBASIC4.17□□□□□ -1.74
PCDHB3Q9Y5E6 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDHB3Q9Y5E6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHB3Q9Y5E6 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
PCDHB3Q9Y5E6 FAM35CP-201ENST00000554755 2470 ntBASIC4.16□□□□□ -1.74
PCDHB3Q9Y5E6 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHB3Q9Y5E6 RNU1-132P-201ENST00000364300 164 ntBASIC4.16□□□□□ -1.74
PCDHB3Q9Y5E6 HMGN2P8-201ENST00000391458 268 ntBASIC4.16□□□□□ -1.74
PCDHB3Q9Y5E6 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDHB3Q9Y5E6 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDHB3Q9Y5E6 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDHB3Q9Y5E6 TVP23BP1-201ENST00000557500 617 ntBASIC4.16□□□□□ -1.74
PCDHB3Q9Y5E6 U7.3-201ENST00000616123 62 ntBASIC4.16□□□□□ -1.74
PCDHB3Q9Y5E6 MIR6076-201ENST00000617521 113 ntBASIC4.16□□□□□ -1.74
PCDHB3Q9Y5E6 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHB3Q9Y5E6 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHB3Q9Y5E6 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDHB3Q9Y5E6 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.15□□□□□ -1.74
PCDHB3Q9Y5E6 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
PCDHB3Q9Y5E6 SPRR2C-201ENST00000290702 219 ntBASIC4.15□□□□□ -1.75
PCDHB3Q9Y5E6 SNORA33-201ENST00000363664 130 ntBASIC4.15□□□□□ -1.75
PCDHB3Q9Y5E6 RNY1P6-201ENST00000384193 109 ntBASIC4.15□□□□□ -1.75
PCDHB3Q9Y5E6 RNU6-675P-201ENST00000384236 104 ntBASIC4.15□□□□□ -1.75
PCDHB3Q9Y5E6 SNORA37-201ENST00000384504 129 ntBASIC4.15□□□□□ -1.75
PCDHB3Q9Y5E6 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.15□□□□□ -1.75
PCDHB3Q9Y5E6 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDHB3Q9Y5E6 AC009238.1-201ENST00000442165 424 ntBASIC4.15□□□□□ -1.75
PCDHB3Q9Y5E6 AC009237.6-201ENST00000446969 424 ntBASIC4.15□□□□□ -1.75
PCDHB3Q9Y5E6 RPL32P34-201ENST00000486380 400 ntBASIC4.15□□□□□ -1.75
PCDHB3Q9Y5E6 RNU6-857P-201ENST00000515893 110 ntBASIC4.15□□□□□ -1.75
PCDHB3Q9Y5E6 RNU6-162P-201ENST00000516228 103 ntBASIC4.15□□□□□ -1.75
PCDHB3Q9Y5E6 RNU2-34P-201ENST00000516534 121 ntBASIC4.15□□□□□ -1.75
PCDHB3Q9Y5E6 AP000867.2-201ENST00000532468 320 ntBASIC4.15□□□□□ -1.75
PCDHB3Q9Y5E6 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDHB3Q9Y5E6 AC012531.5-201ENST00000611375 151 ntBASIC4.15□□□□□ -1.75
PCDHB3Q9Y5E6 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PCDHB3Q9Y5E6 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
PCDHB3Q9Y5E6 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDHB3Q9Y5E6 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PCDHB3Q9Y5E6 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PCDHB3Q9Y5E6 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PCDHB3Q9Y5E6 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDHB3Q9Y5E6 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.14□□□□□ -1.75
PCDHB3Q9Y5E6 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.14□□□□□ -1.75
PCDHB3Q9Y5E6 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.14□□□□□ -1.75
PCDHB3Q9Y5E6 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
PCDHB3Q9Y5E6 Y_RNA.410-201ENST00000383992 113 ntBASIC4.14□□□□□ -1.75
PCDHB3Q9Y5E6 RNU6-644P-201ENST00000391155 98 ntBASIC4.14□□□□□ -1.75
PCDHB3Q9Y5E6 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.14□□□□□ -1.75
PCDHB3Q9Y5E6 AC091153.1-201ENST00000466297 402 ntBASIC4.14□□□□□ -1.75
PCDHB3Q9Y5E6 RPL30P14-201ENST00000482744 348 ntBASIC4.14□□□□□ -1.75
PCDHB3Q9Y5E6 AC006445.1-201ENST00000491925 405 ntBASIC4.14□□□□□ -1.75
PCDHB3Q9Y5E6 SCGB1D5P-201ENST00000515134 247 ntBASIC4.14□□□□□ -1.75
PCDHB3Q9Y5E6 RNU1-61P-201ENST00000516107 151 ntBASIC4.14□□□□□ -1.75
PCDHB3Q9Y5E6 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.14□□□□□ -1.75
PCDHB3Q9Y5E6 AC090115.4-201ENST00000609970 188 ntBASIC4.14□□□□□ -1.75
PCDHB3Q9Y5E6 FAS-AS1.2-201ENST00000620386 170 ntBASIC4.14□□□□□ -1.75
PCDHB3Q9Y5E6 MIR8059-201ENST00000620427 81 ntBASIC4.14□□□□□ -1.75
PCDHB3Q9Y5E6 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PCDHB3Q9Y5E6 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PCDHB3Q9Y5E6 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
PCDHB3Q9Y5E6 MFSD8-236ENST00000641509 4050 ntBASIC4.14□□□□□ -1.75
PCDHB3Q9Y5E6 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHB3Q9Y5E6 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHB3Q9Y5E6 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
PCDHB3Q9Y5E6 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHB3Q9Y5E6 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHB3Q9Y5E6 Y_RNA.10-201ENST00000362371 110 ntBASIC4.13□□□□□ -1.75
PCDHB3Q9Y5E6 Y_RNA.242-201ENST00000364473 110 ntBASIC4.13□□□□□ -1.75
PCDHB3Q9Y5E6 RNU6-979P-201ENST00000383896 107 ntBASIC4.13□□□□□ -1.75
PCDHB3Q9Y5E6 RNU6-1189P-201ENST00000383958 107 ntBASIC4.13□□□□□ -1.75
PCDHB3Q9Y5E6 RNU6-1274P-201ENST00000384557 107 ntBASIC4.13□□□□□ -1.75
PCDHB3Q9Y5E6 SNORD66.1-201ENST00000391230 76 ntBASIC4.13□□□□□ -1.75
PCDHB3Q9Y5E6 AL451046.2-201ENST00000403074 277 ntBASIC4.13□□□□□ -1.75
PCDHB3Q9Y5E6 RN7SKP202-201ENST00000410439 330 ntBASIC4.13□□□□□ -1.75
PCDHB3Q9Y5E6 AC096949.1-201ENST00000412047 152 ntBASIC4.13□□□□□ -1.75
PCDHB3Q9Y5E6 Z98742.2-201ENST00000431564 187 ntBASIC4.13□□□□□ -1.75
PCDHB3Q9Y5E6 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHB3Q9Y5E6 RN7SL691P-201ENST00000494487 301 ntBASIC4.13□□□□□ -1.75
PCDHB3Q9Y5E6 AL592156.1-201ENST00000508758 304 ntBASIC4.13□□□□□ -1.75
PCDHB3Q9Y5E6 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PCDHB3Q9Y5E6 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHB3Q9Y5E6 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHB3Q9Y5E6 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHB3Q9Y5E6 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHB3Q9Y5E6 RNA5SP175-201ENST00000364275 119 ntBASIC4.12□□□□□ -1.75
PCDHB3Q9Y5E6 RNU6-438P-201ENST00000365561 103 ntBASIC4.12□□□□□ -1.75
PCDHB3Q9Y5E6 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PCDHB3Q9Y5E6 RNU1-13P-201ENST00000384499 162 ntBASIC4.12□□□□□ -1.75
PCDHB3Q9Y5E6 MIR134-201ENST00000385258 73 ntBASIC4.12□□□□□ -1.75
PCDHB3Q9Y5E6 RNA5SP317-201ENST00000410176 116 ntBASIC4.12□□□□□ -1.75
PCDHB3Q9Y5E6 RNA5SP311-201ENST00000411290 116 ntBASIC4.12□□□□□ -1.75
PCDHB3Q9Y5E6 AC004941.2-201ENST00000427009 228 ntBASIC4.12□□□□□ -1.75
PCDHB3Q9Y5E6 HMGN2P31-201ENST00000432430 273 ntBASIC4.12□□□□□ -1.75
PCDHB3Q9Y5E6 HMGN2P7-201ENST00000456186 273 ntBASIC4.12□□□□□ -1.75
PCDHB3Q9Y5E6 RPS26P15-201ENST00000488067 348 ntBASIC4.12□□□□□ -1.75
PCDHB3Q9Y5E6 RNA5SP315-201ENST00000516340 116 ntBASIC4.12□□□□□ -1.75
PCDHB3Q9Y5E6 RNA5SP312-201ENST00000517068 116 ntBASIC4.12□□□□□ -1.75
PCDHB3Q9Y5E6 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHB3Q9Y5E6 MIR4286-201ENST00000580651 93 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms