Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.22□□□□□ -2.05
SIX4Q9UIU6 MZT1P2-201ENST00000604387 248 ntBASIC2.22□□□□□ -2.05
SIX4Q9UIU6 AC010999.1-201ENST00000611856 324 ntBASIC2.22□□□□□ -2.05
SIX4Q9UIU6 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.22□□□□□ -2.05
SIX4Q9UIU6 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
SIX4Q9UIU6 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
SIX4Q9UIU6 RNU1-23P-201ENST00000363361 144 ntBASIC2.21□□□□□ -2.06
SIX4Q9UIU6 SNORA63.7-201ENST00000365579 123 ntBASIC2.21□□□□□ -2.06
SIX4Q9UIU6 RNU6-245P-201ENST00000384020 107 ntBASIC2.21□□□□□ -2.06
SIX4Q9UIU6 RNU6-1145P-201ENST00000384246 107 ntBASIC2.21□□□□□ -2.06
SIX4Q9UIU6 RNU6-635P-201ENST00000516651 102 ntBASIC2.21□□□□□ -2.06
SIX4Q9UIU6 IGLV3-17-201ENST00000519099 244 ntBASIC2.21□□□□□ -2.06
SIX4Q9UIU6 AC026470.2-201ENST00000561492 181 ntBASIC2.21□□□□□ -2.06
SIX4Q9UIU6 MIR4659A-201ENST00000580269 81 ntBASIC2.21□□□□□ -2.06
SIX4Q9UIU6 MIR5006-201ENST00000583027 110 ntBASIC2.21□□□□□ -2.06
SIX4Q9UIU6 SNRPGP20-201ENST00000604477 205 ntBASIC2.21□□□□□ -2.06
SIX4Q9UIU6 AL121655.1-201ENST00000605811 308 ntBASIC2.21□□□□□ -2.06
SIX4Q9UIU6 MIR6895-201ENST00000613497 78 ntBASIC2.21□□□□□ -2.06
SIX4Q9UIU6 Y_RNA.783-201ENST00000613546 102 ntBASIC2.21□□□□□ -2.06
SIX4Q9UIU6 TCL6_2.1-201ENST00000615162 119 ntBASIC2.21□□□□□ -2.06
SIX4Q9UIU6 AC240442.1-201ENST00000616055 283 ntBASIC2.21□□□□□ -2.06
SIX4Q9UIU6 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.21□□□□□ -2.06
SIX4Q9UIU6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
SIX4Q9UIU6 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.21□□□□□ -2.06
SIX4Q9UIU6 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SIX4Q9UIU6 Y_RNA.179-201ENST00000363844 90 ntBASIC2.2□□□□□ -2.06
SIX4Q9UIU6 RNA5SP125-201ENST00000364843 120 ntBASIC2.2□□□□□ -2.06
SIX4Q9UIU6 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.2□□□□□ -2.06
SIX4Q9UIU6 RNU6-793P-201ENST00000384233 104 ntBASIC2.2□□□□□ -2.06
SIX4Q9UIU6 Y_RNA.512-201ENST00000384518 102 ntBASIC2.2□□□□□ -2.06
SIX4Q9UIU6 MIR144-201ENST00000384886 86 ntBASIC2.2□□□□□ -2.06
SIX4Q9UIU6 MIR568-201ENST00000385036 95 ntBASIC2.2□□□□□ -2.06
SIX4Q9UIU6 RPL21P1-201ENST00000399532 476 ntBASIC2.2□□□□□ -2.06
SIX4Q9UIU6 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.2□□□□□ -2.06
SIX4Q9UIU6 ELOCP20-201ENST00000422460 345 ntBASIC2.2□□□□□ -2.06
SIX4Q9UIU6 IPO7P1-201ENST00000442031 636 ntBASIC2.2□□□□□ -2.06
SIX4Q9UIU6 FCF1P4-201ENST00000448326 183 ntBASIC2.2□□□□□ -2.06
SIX4Q9UIU6 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.2□□□□□ -2.06
SIX4Q9UIU6 Y_RNA.683-201ENST00000516508 93 ntBASIC2.2□□□□□ -2.06
SIX4Q9UIU6 RNU6-965P-201ENST00000516721 96 ntBASIC2.2□□□□□ -2.06
SIX4Q9UIU6 RNU6-1098P-201ENST00000516772 96 ntBASIC2.2□□□□□ -2.06
SIX4Q9UIU6 RNU6-897P-201ENST00000517135 105 ntBASIC2.2□□□□□ -2.06
SIX4Q9UIU6 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.2□□□□□ -2.06
SIX4Q9UIU6 MIR5739-201ENST00000619803 80 ntBASIC2.2□□□□□ -2.06
SIX4Q9UIU6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
SIX4Q9UIU6 AC092881.1-201ENST00000638218 2733 ntBASIC2.2□□□□□ -2.06
SIX4Q9UIU6 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.2□□□□□ -2.06
SIX4Q9UIU6 MTND5P35-201ENST00000557537 1720 ntBASIC2.2□□□□□ -2.06
SIX4Q9UIU6 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SIX4Q9UIU6 Y_RNA.26-201ENST00000362539 101 ntBASIC2.19□□□□□ -2.06
SIX4Q9UIU6 Y_RNA.105-201ENST00000363182 111 ntBASIC2.19□□□□□ -2.06
SIX4Q9UIU6 Y_RNA.214-201ENST00000364201 112 ntBASIC2.19□□□□□ -2.06
SIX4Q9UIU6 RNU6-806P-201ENST00000365147 105 ntBASIC2.19□□□□□ -2.06
SIX4Q9UIU6 SNORA6-201ENST00000384033 151 ntBASIC2.19□□□□□ -2.06
SIX4Q9UIU6 MIR95-201ENST00000385072 81 ntBASIC2.19□□□□□ -2.06
SIX4Q9UIU6 MIR1261-201ENST00000408659 82 ntBASIC2.19□□□□□ -2.06
SIX4Q9UIU6 RNA5SP504-201ENST00000410676 117 ntBASIC2.19□□□□□ -2.06
SIX4Q9UIU6 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.19□□□□□ -2.06
SIX4Q9UIU6 AL161788.1-201ENST00000441805 169 ntBASIC2.19□□□□□ -2.06
SIX4Q9UIU6 AC073910.1-201ENST00000445047 438 ntBASIC2.19□□□□□ -2.06
SIX4Q9UIU6 IFNA11P-201ENST00000446352 526 ntBASIC2.19□□□□□ -2.06
SIX4Q9UIU6 AC009237.7-201ENST00000447357 229 ntBASIC2.19□□□□□ -2.06
SIX4Q9UIU6 RPL26P26-201ENST00000480251 434 ntBASIC2.19□□□□□ -2.06
SIX4Q9UIU6 CKS1BP2-201ENST00000497342 240 ntBASIC2.19□□□□□ -2.06
SIX4Q9UIU6 AC107222.1-201ENST00000510899 637 ntBASIC2.19□□□□□ -2.06
SIX4Q9UIU6 SNORA40.9-201ENST00000515895 93 ntBASIC2.19□□□□□ -2.06
SIX4Q9UIU6 SNORA31.11-201ENST00000516528 139 ntBASIC2.19□□□□□ -2.06
SIX4Q9UIU6 RNU2-44P-201ENST00000516795 194 ntBASIC2.19□□□□□ -2.06
SIX4Q9UIU6 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.19□□□□□ -2.06
SIX4Q9UIU6 RRN3P3-201ENST00000549207 578 ntBASIC2.19□□□□□ -2.06
SIX4Q9UIU6 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.19□□□□□ -2.06
SIX4Q9UIU6 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.19□□□□□ -2.06
SIX4Q9UIU6 AC010205.1-201ENST00000616668 449 ntBASIC2.19□□□□□ -2.06
SIX4Q9UIU6 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
SIX4Q9UIU6 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.18□□□□□ -2.06
SIX4Q9UIU6 RNU1-62P-201ENST00000362599 164 ntBASIC2.18□□□□□ -2.06
SIX4Q9UIU6 Y_RNA.47-201ENST00000362697 108 ntBASIC2.18□□□□□ -2.06
SIX4Q9UIU6 RNU6-238P-201ENST00000363313 106 ntBASIC2.18□□□□□ -2.06
SIX4Q9UIU6 RNA5SP160-201ENST00000364866 120 ntBASIC2.18□□□□□ -2.06
SIX4Q9UIU6 Y_RNA.415-201ENST00000384012 112 ntBASIC2.18□□□□□ -2.06
SIX4Q9UIU6 RNU6-574P-201ENST00000384265 107 ntBASIC2.18□□□□□ -2.06
SIX4Q9UIU6 Y_RNA.574-201ENST00000384766 95 ntBASIC2.18□□□□□ -2.06
SIX4Q9UIU6 RNU6-1109P-201ENST00000391187 107 ntBASIC2.18□□□□□ -2.06
SIX4Q9UIU6 AL033519.2-201ENST00000403958 392 ntBASIC2.18□□□□□ -2.06
SIX4Q9UIU6 MIR320B2-201ENST00000408479 138 ntBASIC2.18□□□□□ -2.06
SIX4Q9UIU6 MIR1294-201ENST00000408503 142 ntBASIC2.18□□□□□ -2.06
SIX4Q9UIU6 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.18□□□□□ -2.06
SIX4Q9UIU6 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.18□□□□□ -2.06
SIX4Q9UIU6 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
SIX4Q9UIU6 AC003685.2-201ENST00000422795 395 ntBASIC2.18□□□□□ -2.06
SIX4Q9UIU6 MTCYBP9-201ENST00000431021 303 ntBASIC2.18□□□□□ -2.06
SIX4Q9UIU6 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SIX4Q9UIU6 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.18□□□□□ -2.06
SIX4Q9UIU6 MTCO2P24-201ENST00000515611 426 ntBASIC2.18□□□□□ -2.06
SIX4Q9UIU6 RNU1-117P-201ENST00000517041 158 ntBASIC2.18□□□□□ -2.06
SIX4Q9UIU6 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.18□□□□□ -2.06
SIX4Q9UIU6 AC018630.3-201ENST00000542637 96 ntBASIC2.18□□□□□ -2.06
SIX4Q9UIU6 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.18□□□□□ -2.06
SIX4Q9UIU6 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.18□□□□□ -2.06
SIX4Q9UIU6 AC008121.3-201ENST00000618726 433 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms