Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.32□□□□□ -1.88
FOXP3Q9BZS1 RNU6-62P-201ENST00000516526 102 ntBASIC3.32□□□□□ -1.88
FOXP3Q9BZS1 HSPE1P18-201ENST00000517602 280 ntBASIC3.32□□□□□ -1.88
FOXP3Q9BZS1 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.32□□□□□ -1.88
FOXP3Q9BZS1 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.32□□□□□ -1.88
FOXP3Q9BZS1 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.32□□□□□ -1.88
FOXP3Q9BZS1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.32□□□□□ -1.88
FOXP3Q9BZS1 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.32□□□□□ -1.88
FOXP3Q9BZS1 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.32□□□□□ -1.88
FOXP3Q9BZS1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.32□□□□□ -1.88
FOXP3Q9BZS1 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
FOXP3Q9BZS1 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
FOXP3Q9BZS1 GABRG2-229ENST00000641017 3628 ntBASIC3.31□□□□□ -1.88
FOXP3Q9BZS1 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
FOXP3Q9BZS1 RNU6-1048P-201ENST00000364054 107 ntBASIC3.31□□□□□ -1.88
FOXP3Q9BZS1 RNU4-10P-201ENST00000364383 140 ntBASIC3.31□□□□□ -1.88
FOXP3Q9BZS1 RNU6-818P-201ENST00000364837 108 ntBASIC3.31□□□□□ -1.88
FOXP3Q9BZS1 Y_RNA.341-201ENST00000365341 102 ntBASIC3.31□□□□□ -1.88
FOXP3Q9BZS1 MIR586-201ENST00000385035 97 ntBASIC3.31□□□□□ -1.88
FOXP3Q9BZS1 MIR569-201ENST00000385228 96 ntBASIC3.31□□□□□ -1.88
FOXP3Q9BZS1 SNORA12-201ENST00000391162 147 ntBASIC3.31□□□□□ -1.88
FOXP3Q9BZS1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.31□□□□□ -1.88
FOXP3Q9BZS1 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.31□□□□□ -1.88
FOXP3Q9BZS1 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.31□□□□□ -1.88
FOXP3Q9BZS1 SRIP1-201ENST00000489235 288 ntBASIC3.31□□□□□ -1.88
FOXP3Q9BZS1 RNU6-426P-201ENST00000516464 97 ntBASIC3.31□□□□□ -1.88
FOXP3Q9BZS1 MIR5680-201ENST00000577577 84 ntBASIC3.31□□□□□ -1.88
FOXP3Q9BZS1 AC090616.3-201ENST00000582184 217 ntBASIC3.31□□□□□ -1.88
FOXP3Q9BZS1 MIR4276-201ENST00000584832 70 ntBASIC3.31□□□□□ -1.88
FOXP3Q9BZS1 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.31□□□□□ -1.88
FOXP3Q9BZS1 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
FOXP3Q9BZS1 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
FOXP3Q9BZS1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.3□□□□□ -1.88
FOXP3Q9BZS1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.3□□□□□ -1.88
FOXP3Q9BZS1 MAPK10-322ENST00000641485 4530 ntBASIC3.3□□□□□ -1.88
FOXP3Q9BZS1 AC093831.2-201ENST00000624393 3427 ntBASIC3.3□□□□□ -1.88
FOXP3Q9BZS1 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
FOXP3Q9BZS1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
FOXP3Q9BZS1 RNA5SP374-201ENST00000362939 125 ntBASIC3.3□□□□□ -1.88
FOXP3Q9BZS1 SNORD32B-201ENST00000364460 84 ntBASIC3.3□□□□□ -1.88
FOXP3Q9BZS1 Y_RNA.293-201ENST00000364908 93 ntBASIC3.3□□□□□ -1.88
FOXP3Q9BZS1 RNU6-417P-201ENST00000384712 107 ntBASIC3.3□□□□□ -1.88
FOXP3Q9BZS1 SNORA48.5-201ENST00000391143 135 ntBASIC3.3□□□□□ -1.88
FOXP3Q9BZS1 RNU6-1077P-201ENST00000410506 102 ntBASIC3.3□□□□□ -1.88
FOXP3Q9BZS1 AL139281.1-201ENST00000422120 335 ntBASIC3.3□□□□□ -1.88
FOXP3Q9BZS1 AC009969.1-201ENST00000438726 172 ntBASIC3.3□□□□□ -1.88
FOXP3Q9BZS1 RPS12P18-201ENST00000442381 270 ntBASIC3.3□□□□□ -1.88
FOXP3Q9BZS1 RN7SL75P-201ENST00000461926 281 ntBASIC3.3□□□□□ -1.88
FOXP3Q9BZS1 AC010409.1-201ENST00000487382 476 ntBASIC3.3□□□□□ -1.88
FOXP3Q9BZS1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.3□□□□□ -1.88
FOXP3Q9BZS1 SNORA31.1-201ENST00000515993 133 ntBASIC3.3□□□□□ -1.88
FOXP3Q9BZS1 SNORA70.12-201ENST00000516084 153 ntBASIC3.3□□□□□ -1.88
FOXP3Q9BZS1 SNORA31.5-201ENST00000516190 133 ntBASIC3.3□□□□□ -1.88
FOXP3Q9BZS1 Y_RNA.802-201ENST00000614892 130 ntBASIC3.3□□□□□ -1.88
FOXP3Q9BZS1 AC008264.2-201ENST00000610193 3731 ntBASIC3.3□□□□□ -1.88
FOXP3Q9BZS1 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.3□□□□□ -1.88
FOXP3Q9BZS1 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.29□□□□□ -1.88
FOXP3Q9BZS1 SNORA51.4-201ENST00000364993 124 ntBASIC3.29□□□□□ -1.88
FOXP3Q9BZS1 MIR526A2-201ENST00000390198 65 ntBASIC3.29□□□□□ -1.88
FOXP3Q9BZS1 EIF4EP4-201ENST00000424916 578 ntBASIC3.29□□□□□ -1.88
FOXP3Q9BZS1 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.29□□□□□ -1.88
FOXP3Q9BZS1 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.29□□□□□ -1.88
FOXP3Q9BZS1 RN7SKP43-201ENST00000516173 320 ntBASIC3.29□□□□□ -1.88
FOXP3Q9BZS1 RNU6-313P-201ENST00000516317 112 ntBASIC3.29□□□□□ -1.88
FOXP3Q9BZS1 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.29□□□□□ -1.88
FOXP3Q9BZS1 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.29□□□□□ -1.88
FOXP3Q9BZS1 MIR5688-201ENST00000580619 83 ntBASIC3.29□□□□□ -1.88
FOXP3Q9BZS1 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
FOXP3Q9BZS1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.29□□□□□ -1.88
FOXP3Q9BZS1 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
FOXP3Q9BZS1 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.29□□□□□ -1.88
FOXP3Q9BZS1 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
FOXP3Q9BZS1 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
FOXP3Q9BZS1 Y_RNA.572-201ENST00000384757 98 ntBASIC3.28□□□□□ -1.88
FOXP3Q9BZS1 MIR616-201ENST00000385293 97 ntBASIC3.28□□□□□ -1.88
FOXP3Q9BZS1 RNU6-1168P-201ENST00000390831 104 ntBASIC3.28□□□□□ -1.88
FOXP3Q9BZS1 RNU6-1154P-201ENST00000391001 104 ntBASIC3.28□□□□□ -1.88
FOXP3Q9BZS1 RNU6-257P-201ENST00000410238 98 ntBASIC3.28□□□□□ -1.88
FOXP3Q9BZS1 AC097463.2-201ENST00000421074 142 ntBASIC3.28□□□□□ -1.88
FOXP3Q9BZS1 AC244505.4-201ENST00000434905 287 ntBASIC3.28□□□□□ -1.88
FOXP3Q9BZS1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.28□□□□□ -1.88
FOXP3Q9BZS1 AC006028.1-201ENST00000438379 402 ntBASIC3.28□□□□□ -1.88
FOXP3Q9BZS1 SSXP5-201ENST00000443473 287 ntBASIC3.28□□□□□ -1.88
FOXP3Q9BZS1 RNU7-141P-201ENST00000459304 62 ntBASIC3.28□□□□□ -1.88
FOXP3Q9BZS1 AP001486.1-201ENST00000463339 476 ntBASIC3.28□□□□□ -1.88
FOXP3Q9BZS1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
FOXP3Q9BZS1 AC107027.2-201ENST00000512197 115 ntBASIC3.28□□□□□ -1.88
FOXP3Q9BZS1 SNORA31.26-201ENST00000517250 137 ntBASIC3.28□□□□□ -1.88
FOXP3Q9BZS1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.28□□□□□ -1.88
FOXP3Q9BZS1 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.28□□□□□ -1.88
FOXP3Q9BZS1 MIR548X2-201ENST00000579776 100 ntBASIC3.28□□□□□ -1.88
FOXP3Q9BZS1 AC025754.2-201ENST00000606491 432 ntBASIC3.28□□□□□ -1.88
FOXP3Q9BZS1 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
FOXP3Q9BZS1 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.28□□□□□ -1.88
FOXP3Q9BZS1 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.27□□□□□ -1.89
FOXP3Q9BZS1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
FOXP3Q9BZS1 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
FOXP3Q9BZS1 Y_RNA.24-201ENST00000362508 103 ntBASIC3.27□□□□□ -1.89
FOXP3Q9BZS1 SNORD114-7-201ENST00000362520 77 ntBASIC3.27□□□□□ -1.89
FOXP3Q9BZS1 RNU6-1290P-201ENST00000362957 109 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms