Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 U8.10-201ENST00000384260 133 ntBASIC2.94□□□□□ -1.94
LRFN3Q9BTN0 RNU5A-5P-201ENST00000411054 116 ntBASIC2.94□□□□□ -1.94
LRFN3Q9BTN0 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.94□□□□□ -1.94
LRFN3Q9BTN0 AL161788.1-201ENST00000441805 169 ntBASIC2.94□□□□□ -1.94
LRFN3Q9BTN0 TMSB4XP3-201ENST00000445144 114 ntBASIC2.94□□□□□ -1.94
LRFN3Q9BTN0 RPS27P29-201ENST00000463110 252 ntBASIC2.94□□□□□ -1.94
LRFN3Q9BTN0 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.94□□□□□ -1.94
LRFN3Q9BTN0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.94□□□□□ -1.94
LRFN3Q9BTN0 RNU6-1053P-201ENST00000515930 101 ntBASIC2.94□□□□□ -1.94
LRFN3Q9BTN0 RNU6-1278P-201ENST00000516130 107 ntBASIC2.94□□□□□ -1.94
LRFN3Q9BTN0 AC107934.2-201ENST00000518653 310 ntBASIC2.94□□□□□ -1.94
LRFN3Q9BTN0 AK6P2-201ENST00000549020 471 ntBASIC2.94□□□□□ -1.94
LRFN3Q9BTN0 AC027288.2-201ENST00000553028 243 ntBASIC2.94□□□□□ -1.94
LRFN3Q9BTN0 AL713866.2-201ENST00000603579 219 ntBASIC2.94□□□□□ -1.94
LRFN3Q9BTN0 AC072026.1-201ENST00000605023 201 ntBASIC2.94□□□□□ -1.94
LRFN3Q9BTN0 AC037487.3-201ENST00000606668 112 ntBASIC2.94□□□□□ -1.94
LRFN3Q9BTN0 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
LRFN3Q9BTN0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
LRFN3Q9BTN0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.94□□□□□ -1.94
LRFN3Q9BTN0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
LRFN3Q9BTN0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LRFN3Q9BTN0 Y_RNA.170-201ENST00000363746 110 ntBASIC2.93□□□□□ -1.94
LRFN3Q9BTN0 Y_RNA.275-201ENST00000364726 110 ntBASIC2.93□□□□□ -1.94
LRFN3Q9BTN0 Y_RNA.291-201ENST00000364886 113 ntBASIC2.93□□□□□ -1.94
LRFN3Q9BTN0 RNU6-1180P-201ENST00000364935 107 ntBASIC2.93□□□□□ -1.94
LRFN3Q9BTN0 SNORD113-1-201ENST00000365321 69 ntBASIC2.93□□□□□ -1.94
LRFN3Q9BTN0 SNORA9.2-201ENST00000365361 133 ntBASIC2.93□□□□□ -1.94
LRFN3Q9BTN0 RNU6-245P-201ENST00000384020 107 ntBASIC2.93□□□□□ -1.94
LRFN3Q9BTN0 MIR10B-201ENST00000385011 110 ntBASIC2.93□□□□□ -1.94
LRFN3Q9BTN0 SNORA46.1-201ENST00000391069 153 ntBASIC2.93□□□□□ -1.94
LRFN3Q9BTN0 RN7SKP223-201ENST00000410582 62 ntBASIC2.93□□□□□ -1.94
LRFN3Q9BTN0 RN7SKP51-201ENST00000410781 304 ntBASIC2.93□□□□□ -1.94
LRFN3Q9BTN0 AC092427.1-202ENST00000430569 476 ntBASIC2.93□□□□□ -1.94
LRFN3Q9BTN0 AL445687.1-201ENST00000439946 251 ntBASIC2.93□□□□□ -1.94
LRFN3Q9BTN0 RNU7-110P-201ENST00000516891 62 ntBASIC2.93□□□□□ -1.94
LRFN3Q9BTN0 RNU6-58P-201ENST00000517143 103 ntBASIC2.93□□□□□ -1.94
LRFN3Q9BTN0 AC109329.2-201ENST00000519658 482 ntBASIC2.93□□□□□ -1.94
LRFN3Q9BTN0 MIR4282-201ENST00000583613 67 ntBASIC2.93□□□□□ -1.94
LRFN3Q9BTN0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.93□□□□□ -1.94
LRFN3Q9BTN0 AL590240.4-201ENST00000616908 390 ntBASIC2.93□□□□□ -1.94
LRFN3Q9BTN0 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.93□□□□□ -1.94
LRFN3Q9BTN0 BX322639.1-202ENST00000423987 2213 ntBASIC2.93□□□□□ -1.94
LRFN3Q9BTN0 Z82209.1-201ENST00000422141 2135 ntBASIC2.93□□□□□ -1.94
LRFN3Q9BTN0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 AC135776.4-201ENST00000624300 1904 ntBASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 RNU6-626P-201ENST00000363354 107 ntBASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 Y_RNA.140-201ENST00000363474 103 ntBASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 RNU6-281P-201ENST00000384212 103 ntBASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 RNU6-21P-201ENST00000384710 107 ntBASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 Y_RNA.590-201ENST00000410140 107 ntBASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 RNU4-53P-201ENST00000410828 140 ntBASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 RNU2-61P-201ENST00000411069 191 ntBASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 WARS2P1-201ENST00000429678 537 ntBASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 CST9LP2-201ENST00000437612 320 ntBASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 AP000705.1-201ENST00000454567 350 ntBASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 AC108729.3-201ENST00000513484 108 ntBASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 Y_RNA.679-201ENST00000516416 91 ntBASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 RN7SKP49-201ENST00000516675 260 ntBASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 RNA5SP380-201ENST00000517190 98 ntBASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 UBL5P4-201ENST00000562584 236 ntBASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 MIR5695-201ENST00000579717 85 ntBASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 AC005296.1-201ENST00000616145 209 ntBASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 CTSLP2-204ENST00000629029 392 ntBASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.92□□□□□ -1.94
LRFN3Q9BTN0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 SNORA25.1-201ENST00000362326 128 ntBASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 RNA5SP289-201ENST00000362332 137 ntBASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 RNU1-72P-201ENST00000362976 153 ntBASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 RNU6-961P-201ENST00000363893 105 ntBASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 RNU1-112P-201ENST00000364401 164 ntBASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 RNU6-805P-201ENST00000365643 106 ntBASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 Y_RNA.418-201ENST00000384029 102 ntBASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 RNU6-20P-201ENST00000384106 107 ntBASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 Y_RNA.446-201ENST00000384178 104 ntBASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 Y_RNA.570-201ENST00000384750 101 ntBASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 MIR487A-201ENST00000385009 80 ntBASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 RNU6-220P-201ENST00000390919 107 ntBASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 MIR1294-201ENST00000408503 142 ntBASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 Y_RNA.595-201ENST00000410403 105 ntBASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 RNU6-1001P-201ENST00000411265 100 ntBASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 AL135786.1-201ENST00000415892 214 ntBASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 UQCRHP3-201ENST00000451503 251 ntBASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 RN7SL499P-201ENST00000481141 276 ntBASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 HSPE1P18-201ENST00000517602 280 ntBASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 MZT1P2-201ENST00000604387 248 ntBASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
LRFN3Q9BTN0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms