Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.81□□□□□ -1.8
CALR3Q96L12 DYNLT3P1-201ENST00000378574 347 ntBASIC3.81□□□□□ -1.8
CALR3Q96L12 RNY3P5-201ENST00000384127 102 ntBASIC3.81□□□□□ -1.8
CALR3Q96L12 Y_RNA.488-201ENST00000384403 102 ntBASIC3.81□□□□□ -1.8
CALR3Q96L12 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CALR3Q96L12 AL606753.1-201ENST00000427435 87 ntBASIC3.81□□□□□ -1.8
CALR3Q96L12 AC010401.1-201ENST00000463867 348 ntBASIC3.81□□□□□ -1.8
CALR3Q96L12 AC021205.2-201ENST00000480069 347 ntBASIC3.81□□□□□ -1.8
CALR3Q96L12 RNU6-1146P-201ENST00000516282 102 ntBASIC3.81□□□□□ -1.8
CALR3Q96L12 AC026333.2-201ENST00000542164 106 ntBASIC3.81□□□□□ -1.8
CALR3Q96L12 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.81□□□□□ -1.8
CALR3Q96L12 AC019176.2-201ENST00000611579 315 ntBASIC3.81□□□□□ -1.8
CALR3Q96L12 AL449363.1-201ENST00000617815 186 ntBASIC3.81□□□□□ -1.8
CALR3Q96L12 AC022149.2-201ENST00000621061 203 ntBASIC3.81□□□□□ -1.8
CALR3Q96L12 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.81□□□□□ -1.8
CALR3Q96L12 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CALR3Q96L12 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CALR3Q96L12 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CALR3Q96L12 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CALR3Q96L12 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.8□□□□□ -1.8
CALR3Q96L12 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CALR3Q96L12 RNU6-151P-201ENST00000364158 107 ntBASIC3.8□□□□□ -1.8
CALR3Q96L12 SNORD113-1-201ENST00000365321 69 ntBASIC3.8□□□□□ -1.8
CALR3Q96L12 RNU6-728P-201ENST00000365375 104 ntBASIC3.8□□□□□ -1.8
CALR3Q96L12 SNORA72-201ENST00000384339 132 ntBASIC3.8□□□□□ -1.8
CALR3Q96L12 RNU6-136P-201ENST00000384663 107 ntBASIC3.8□□□□□ -1.8
CALR3Q96L12 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CALR3Q96L12 SRIP3-201ENST00000413200 219 ntBASIC3.8□□□□□ -1.8
CALR3Q96L12 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.8□□□□□ -1.8
CALR3Q96L12 AC060773.1-201ENST00000421698 310 ntBASIC3.8□□□□□ -1.8
CALR3Q96L12 AL117339.2-201ENST00000430475 180 ntBASIC3.8□□□□□ -1.8
CALR3Q96L12 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.8□□□□□ -1.8
CALR3Q96L12 snoU13.22-201ENST00000459428 104 ntBASIC3.8□□□□□ -1.8
CALR3Q96L12 RPS27P29-201ENST00000463110 252 ntBASIC3.8□□□□□ -1.8
CALR3Q96L12 SNORA70.19-201ENST00000516717 90 ntBASIC3.8□□□□□ -1.8
CALR3Q96L12 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.8□□□□□ -1.8
CALR3Q96L12 NDUFB9P3-201ENST00000521269 501 ntBASIC3.8□□□□□ -1.8
CALR3Q96L12 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.8□□□□□ -1.8
CALR3Q96L12 U6.73-201ENST00000619194 103 ntBASIC3.8□□□□□ -1.8
CALR3Q96L12 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CALR3Q96L12 AL354798.1-201ENST00000622505 329 ntBASIC3.8□□□□□ -1.8
CALR3Q96L12 MIR6830-201ENST00000636015 70 ntBASIC3.8□□□□□ -1.8
CALR3Q96L12 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CALR3Q96L12 AL355596.1-201ENST00000565399 3996 ntBASIC3.79□□□□□ -1.8
CALR3Q96L12 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
CALR3Q96L12 SPRR2C-201ENST00000290702 219 ntBASIC3.79□□□□□ -1.8
CALR3Q96L12 Y_RNA.215-201ENST00000364204 112 ntBASIC3.79□□□□□ -1.8
CALR3Q96L12 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.79□□□□□ -1.8
CALR3Q96L12 RNU1-13P-201ENST00000384499 162 ntBASIC3.79□□□□□ -1.8
CALR3Q96L12 MIR627-201ENST00000384979 97 ntBASIC3.79□□□□□ -1.8
CALR3Q96L12 MIR15B-201ENST00000385045 98 ntBASIC3.79□□□□□ -1.8
CALR3Q96L12 RNA5SP496-201ENST00000391240 109 ntBASIC3.79□□□□□ -1.8
CALR3Q96L12 AL445687.1-201ENST00000439946 251 ntBASIC3.79□□□□□ -1.8
CALR3Q96L12 RPL23AP67-201ENST00000465341 474 ntBASIC3.79□□□□□ -1.8
CALR3Q96L12 RPS29P21-201ENST00000496272 170 ntBASIC3.79□□□□□ -1.8
CALR3Q96L12 AC110768.1-201ENST00000509222 400 ntBASIC3.79□□□□□ -1.8
CALR3Q96L12 SNORD116-25-201ENST00000516517 92 ntBASIC3.79□□□□□ -1.8
CALR3Q96L12 MIR2116-201ENST00000517221 80 ntBASIC3.79□□□□□ -1.8
CALR3Q96L12 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.79□□□□□ -1.8
CALR3Q96L12 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CALR3Q96L12 RNA5SP387-201ENST00000364226 106 ntBASIC3.78□□□□□ -1.8
CALR3Q96L12 Y_RNA.337-201ENST00000365312 102 ntBASIC3.78□□□□□ -1.8
CALR3Q96L12 AL512604.1-201ENST00000404812 257 ntBASIC3.78□□□□□ -1.8
CALR3Q96L12 HMGN2P34-201ENST00000437647 269 ntBASIC3.78□□□□□ -1.8
CALR3Q96L12 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.78□□□□□ -1.8
CALR3Q96L12 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.78□□□□□ -1.8
CALR3Q96L12 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.78□□□□□ -1.8
CALR3Q96L12 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.78□□□□□ -1.8
CALR3Q96L12 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.78□□□□□ -1.8
CALR3Q96L12 Z83843.1-201ENST00000604070 3685 ntBASIC3.78□□□□□ -1.8
CALR3Q96L12 AL356274.2-201ENST00000624379 3752 ntBASIC3.78□□□□□ -1.8
CALR3Q96L12 MIR30E-201ENST00000362104 92 ntBASIC3.77□□□□□ -1.81
CALR3Q96L12 RNU4-41P-201ENST00000364426 143 ntBASIC3.77□□□□□ -1.81
CALR3Q96L12 AC006461.1-201ENST00000412637 326 ntBASIC3.77□□□□□ -1.81
CALR3Q96L12 RPL21P129-201ENST00000491732 478 ntBASIC3.77□□□□□ -1.81
CALR3Q96L12 AC011406.1-201ENST00000512440 370 ntBASIC3.77□□□□□ -1.81
CALR3Q96L12 AC087499.8-201ENST00000578406 226 ntBASIC3.77□□□□□ -1.81
CALR3Q96L12 LARP7P3-201ENST00000579888 337 ntBASIC3.77□□□□□ -1.81
CALR3Q96L12 MIR4286-201ENST00000580651 93 ntBASIC3.77□□□□□ -1.81
CALR3Q96L12 DNAJC19P2-201ENST00000593340 302 ntBASIC3.77□□□□□ -1.81
CALR3Q96L12 U4atac.1-201ENST00000618345 95 ntBASIC3.77□□□□□ -1.81
CALR3Q96L12 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.77□□□□□ -1.81
CALR3Q96L12 AC017071.1-201ENST00000564407 2204 ntBASIC3.76□□□□□ -1.81
CALR3Q96L12 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
CALR3Q96L12 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.76□□□□□ -1.81
CALR3Q96L12 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CALR3Q96L12 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.76□□□□□ -1.81
CALR3Q96L12 Y_RNA.99-201ENST00000363138 105 ntBASIC3.76□□□□□ -1.81
CALR3Q96L12 RNU6-81P-201ENST00000365608 104 ntBASIC3.76□□□□□ -1.81
CALR3Q96L12 RNU6-643P-201ENST00000384018 107 ntBASIC3.76□□□□□ -1.81
CALR3Q96L12 Y_RNA.497-201ENST00000384447 98 ntBASIC3.76□□□□□ -1.81
CALR3Q96L12 MIR30B-201ENST00000384850 88 ntBASIC3.76□□□□□ -1.81
CALR3Q96L12 MIR1278-201ENST00000408753 81 ntBASIC3.76□□□□□ -1.81
CALR3Q96L12 RN7SKP101-201ENST00000411376 320 ntBASIC3.76□□□□□ -1.81
CALR3Q96L12 AC244505.4-201ENST00000434905 287 ntBASIC3.76□□□□□ -1.81
CALR3Q96L12 AC009238.1-201ENST00000442165 424 ntBASIC3.76□□□□□ -1.81
CALR3Q96L12 SSXP5-201ENST00000443473 287 ntBASIC3.76□□□□□ -1.81
CALR3Q96L12 AC009237.6-201ENST00000446969 424 ntBASIC3.76□□□□□ -1.81
CALR3Q96L12 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.76□□□□□ -1.81
CALR3Q96L12 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms