Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.24□□□□□ -1.89
SHDQ96IW2 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHDQ96IW2 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHDQ96IW2 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHDQ96IW2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.24□□□□□ -1.89
SHDQ96IW2 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHDQ96IW2 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.23□□□□□ -1.89
SHDQ96IW2 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHDQ96IW2 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SHDQ96IW2 AL021368.2-201ENST00000606125 5352 ntBASIC3.23□□□□□ -1.89
SHDQ96IW2 RNU6-271P-201ENST00000363858 105 ntBASIC3.23□□□□□ -1.89
SHDQ96IW2 RNU6-743P-201ENST00000364151 106 ntBASIC3.23□□□□□ -1.89
SHDQ96IW2 AP002088.1-201ENST00000382740 395 ntBASIC3.23□□□□□ -1.89
SHDQ96IW2 RNU6-1235P-201ENST00000384559 107 ntBASIC3.23□□□□□ -1.89
SHDQ96IW2 PIGPP3-201ENST00000425307 415 ntBASIC3.23□□□□□ -1.89
SHDQ96IW2 PRELID3BP1-201ENST00000457142 540 ntBASIC3.23□□□□□ -1.89
SHDQ96IW2 Y_RNA.644-201ENST00000459006 113 ntBASIC3.23□□□□□ -1.89
SHDQ96IW2 RNU6-498P-201ENST00000459468 107 ntBASIC3.23□□□□□ -1.89
SHDQ96IW2 Y_RNA.674-201ENST00000516362 113 ntBASIC3.23□□□□□ -1.89
SHDQ96IW2 RNA5SP367-201ENST00000516557 118 ntBASIC3.23□□□□□ -1.89
SHDQ96IW2 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.23□□□□□ -1.89
SHDQ96IW2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.23□□□□□ -1.89
SHDQ96IW2 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHDQ96IW2 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.22□□□□□ -1.89
SHDQ96IW2 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.22□□□□□ -1.89
SHDQ96IW2 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHDQ96IW2 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHDQ96IW2 RNU1-70P-201ENST00000362618 164 ntBASIC3.22□□□□□ -1.89
SHDQ96IW2 RNU6-1272P-201ENST00000362776 107 ntBASIC3.22□□□□□ -1.89
SHDQ96IW2 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHDQ96IW2 SNORD14D-201ENST00000384390 87 ntBASIC3.22□□□□□ -1.89
SHDQ96IW2 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.22□□□□□ -1.89
SHDQ96IW2 AL445687.1-201ENST00000439946 251 ntBASIC3.22□□□□□ -1.89
SHDQ96IW2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.22□□□□□ -1.89
SHDQ96IW2 SNORD116-28-201ENST00000516123 91 ntBASIC3.22□□□□□ -1.89
SHDQ96IW2 MIR3945-201ENST00000581853 98 ntBASIC3.22□□□□□ -1.89
SHDQ96IW2 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHDQ96IW2 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.22□□□□□ -1.89
SHDQ96IW2 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHDQ96IW2 FAM35CP-201ENST00000554755 2470 ntBASIC3.21□□□□□ -1.89
SHDQ96IW2 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
SHDQ96IW2 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
SHDQ96IW2 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SHDQ96IW2 RNU6-209P-201ENST00000384118 107 ntBASIC3.21□□□□□ -1.9
SHDQ96IW2 RNU6-651P-201ENST00000411040 105 ntBASIC3.21□□□□□ -1.9
SHDQ96IW2 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.21□□□□□ -1.9
SHDQ96IW2 BTF3P11-201ENST00000426582 477 ntBASIC3.21□□□□□ -1.9
SHDQ96IW2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.21□□□□□ -1.9
SHDQ96IW2 AC091826.1-201ENST00000514065 313 ntBASIC3.21□□□□□ -1.9
SHDQ96IW2 SNORA4.4-201ENST00000515921 135 ntBASIC3.21□□□□□ -1.9
SHDQ96IW2 AC136628.3-201ENST00000521868 290 ntBASIC3.21□□□□□ -1.9
SHDQ96IW2 AC024405.2-202ENST00000532731 184 ntBASIC3.21□□□□□ -1.9
SHDQ96IW2 MIR4435-1-201ENST00000582552 80 ntBASIC3.21□□□□□ -1.9
SHDQ96IW2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.21□□□□□ -1.9
SHDQ96IW2 snoU18.1-201ENST00000629629 71 ntBASIC3.21□□□□□ -1.9
SHDQ96IW2 AL159152.1-201ENST00000635019 2587 ntBASIC3.21□□□□□ -1.9
SHDQ96IW2 PWAR6-201ENST00000552334 4618 ntBASIC3.2□□□□□ -1.9
SHDQ96IW2 Y_RNA.262-201ENST00000364641 102 ntBASIC3.2□□□□□ -1.9
SHDQ96IW2 RNU6-418P-201ENST00000384035 107 ntBASIC3.2□□□□□ -1.9
SHDQ96IW2 RNU6-211P-201ENST00000384047 107 ntBASIC3.2□□□□□ -1.9
SHDQ96IW2 MIR184-201ENST00000384962 84 ntBASIC3.2□□□□□ -1.9
SHDQ96IW2 MIR873-201ENST00000401120 77 ntBASIC3.2□□□□□ -1.9
SHDQ96IW2 RNU6-855P-201ENST00000410395 104 ntBASIC3.2□□□□□ -1.9
SHDQ96IW2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
SHDQ96IW2 Z96811.1-201ENST00000445880 108 ntBASIC3.2□□□□□ -1.9
SHDQ96IW2 AC016717.1-201ENST00000448918 286 ntBASIC3.2□□□□□ -1.9
SHDQ96IW2 AC010598.1-201ENST00000510378 103 ntBASIC3.2□□□□□ -1.9
SHDQ96IW2 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.2□□□□□ -1.9
SHDQ96IW2 uc_338.25-201ENST00000613756 156 ntBASIC3.2□□□□□ -1.9
SHDQ96IW2 AC004792.1-201ENST00000614523 137 ntBASIC3.2□□□□□ -1.9
SHDQ96IW2 AL078604.3-201ENST00000615580 211 ntBASIC3.2□□□□□ -1.9
SHDQ96IW2 MIR6715A-201ENST00000615929 79 ntBASIC3.2□□□□□ -1.9
SHDQ96IW2 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SHDQ96IW2 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SHDQ96IW2 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHDQ96IW2 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHDQ96IW2 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHDQ96IW2 RNU6-1020P-201ENST00000363684 107 ntBASIC3.19□□□□□ -1.9
SHDQ96IW2 Y_RNA.341-201ENST00000365341 102 ntBASIC3.19□□□□□ -1.9
SHDQ96IW2 Y_RNA.361-201ENST00000365515 120 ntBASIC3.19□□□□□ -1.9
SHDQ96IW2 Y_RNA.456-201ENST00000384232 111 ntBASIC3.19□□□□□ -1.9
SHDQ96IW2 AC123900.1-201ENST00000420390 96 ntBASIC3.19□□□□□ -1.9
SHDQ96IW2 AC010154.1-201ENST00000425857 269 ntBASIC3.19□□□□□ -1.9
SHDQ96IW2 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.19□□□□□ -1.9
SHDQ96IW2 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.19□□□□□ -1.9
SHDQ96IW2 AL357134.1-201ENST00000445848 426 ntBASIC3.19□□□□□ -1.9
SHDQ96IW2 AC093259.1-201ENST00000509755 300 ntBASIC3.19□□□□□ -1.9
SHDQ96IW2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.19□□□□□ -1.9
SHDQ96IW2 AC004832.5-201ENST00000608677 401 ntBASIC3.19□□□□□ -1.9
SHDQ96IW2 RMST_8.1-201ENST00000610287 165 ntBASIC3.19□□□□□ -1.9
SHDQ96IW2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SHDQ96IW2 MIR7153-201ENST00000637758 57 ntBASIC3.19□□□□□ -1.9
SHDQ96IW2 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SHDQ96IW2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.19□□□□□ -1.9
SHDQ96IW2 AL136360.1-201ENST00000503377 1900 ntBASIC3.19□□□□□ -1.9
SHDQ96IW2 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SHDQ96IW2 MIR22-201ENST00000362190 85 ntBASIC3.18□□□□□ -1.9
SHDQ96IW2 Y_RNA.270-201ENST00000364693 104 ntBASIC3.18□□□□□ -1.9
SHDQ96IW2 RNA5SP125-201ENST00000364843 120 ntBASIC3.18□□□□□ -1.9
SHDQ96IW2 Y_RNA.287-201ENST00000364853 94 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms