Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 AC010401.1-201ENST00000463867 348 ntBASIC3.36□□□□□ -1.87
RNF34Q969K3 AC021205.2-201ENST00000480069 347 ntBASIC3.36□□□□□ -1.87
RNF34Q969K3 AC073349.3-201ENST00000617616 186 ntBASIC3.36□□□□□ -1.87
RNF34Q969K3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF34Q969K3 SNORD56.5-201ENST00000364281 72 ntBASIC3.35□□□□□ -1.87
RNF34Q969K3 Y_RNA.308-201ENST00000365043 101 ntBASIC3.35□□□□□ -1.87
RNF34Q969K3 AP002088.1-201ENST00000382740 395 ntBASIC3.35□□□□□ -1.87
RNF34Q969K3 RNU6-211P-201ENST00000384047 107 ntBASIC3.35□□□□□ -1.87
RNF34Q969K3 MIR23A-201ENST00000385245 73 ntBASIC3.35□□□□□ -1.87
RNF34Q969K3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.35□□□□□ -1.87
RNF34Q969K3 RNU6-710P-201ENST00000410424 105 ntBASIC3.35□□□□□ -1.87
RNF34Q969K3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.35□□□□□ -1.87
RNF34Q969K3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.35□□□□□ -1.87
RNF34Q969K3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.35□□□□□ -1.87
RNF34Q969K3 AL008718.3-201ENST00000610217 321 ntBASIC3.35□□□□□ -1.87
RNF34Q969K3 MIR7112-201ENST00000616126 65 ntBASIC3.35□□□□□ -1.87
RNF34Q969K3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF34Q969K3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNF34Q969K3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNF34Q969K3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNF34Q969K3 MIR548M-201ENST00000408260 86 ntBASIC3.34□□□□□ -1.87
RNF34Q969K3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.34□□□□□ -1.87
RNF34Q969K3 AC008134.1-201ENST00000420943 193 ntBASIC3.34□□□□□ -1.87
RNF34Q969K3 BTF3P11-201ENST00000426582 477 ntBASIC3.34□□□□□ -1.87
RNF34Q969K3 AL135790.2-201ENST00000437701 267 ntBASIC3.34□□□□□ -1.87
RNF34Q969K3 AC010531.2-201ENST00000465012 153 ntBASIC3.34□□□□□ -1.87
RNF34Q969K3 AC092185.1-201ENST00000491371 97 ntBASIC3.34□□□□□ -1.87
RNF34Q969K3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.34□□□□□ -1.87
RNF34Q969K3 SNORA4.4-201ENST00000515921 135 ntBASIC3.34□□□□□ -1.87
RNF34Q969K3 SNORA70.12-201ENST00000516084 153 ntBASIC3.34□□□□□ -1.87
RNF34Q969K3 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.34□□□□□ -1.87
RNF34Q969K3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.34□□□□□ -1.87
RNF34Q969K3 MIR3651-201ENST00000630427 90 ntBASIC3.34□□□□□ -1.87
RNF34Q969K3 AL355596.1-201ENST00000565399 3996 ntBASIC3.34□□□□□ -1.87
RNF34Q969K3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
RNF34Q969K3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RNF34Q969K3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RNF34Q969K3 RNU6-1272P-201ENST00000362776 107 ntBASIC3.33□□□□□ -1.88
RNF34Q969K3 RNU6-918P-201ENST00000391219 106 ntBASIC3.33□□□□□ -1.88
RNF34Q969K3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.33□□□□□ -1.88
RNF34Q969K3 RNU4-47P-201ENST00000410876 114 ntBASIC3.33□□□□□ -1.88
RNF34Q969K3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.33□□□□□ -1.88
RNF34Q969K3 AL357134.1-201ENST00000445848 426 ntBASIC3.33□□□□□ -1.88
RNF34Q969K3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.33□□□□□ -1.88
RNF34Q969K3 AL137100.2-201ENST00000555786 315 ntBASIC3.33□□□□□ -1.88
RNF34Q969K3 MIR4308-201ENST00000580634 81 ntBASIC3.33□□□□□ -1.88
RNF34Q969K3 AC090115.4-201ENST00000609970 188 ntBASIC3.33□□□□□ -1.88
RNF34Q969K3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
RNF34Q969K3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RNF34Q969K3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.32□□□□□ -1.88
RNF34Q969K3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RNF34Q969K3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF34Q969K3 RNA5SP229-201ENST00000410809 99 ntBASIC3.32□□□□□ -1.88
RNF34Q969K3 SRIP3-201ENST00000413200 219 ntBASIC3.32□□□□□ -1.88
RNF34Q969K3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF34Q969K3 MTCO1P44-201ENST00000441935 243 ntBASIC3.32□□□□□ -1.88
RNF34Q969K3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.32□□□□□ -1.88
RNF34Q969K3 RN7SL863P-201ENST00000462370 296 ntBASIC3.32□□□□□ -1.88
RNF34Q969K3 AC109925.1-201ENST00000478069 331 ntBASIC3.32□□□□□ -1.88
RNF34Q969K3 RNU6-255P-201ENST00000516957 105 ntBASIC3.32□□□□□ -1.88
RNF34Q969K3 RN7SKP57-201ENST00000517248 293 ntBASIC3.32□□□□□ -1.88
RNF34Q969K3 AC025647.1-201ENST00000517879 253 ntBASIC3.32□□□□□ -1.88
RNF34Q969K3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.32□□□□□ -1.88
RNF34Q969K3 MIR2682-201ENST00000580305 110 ntBASIC3.32□□□□□ -1.88
RNF34Q969K3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF34Q969K3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.32□□□□□ -1.88
RNF34Q969K3 uc_338.25-201ENST00000613756 156 ntBASIC3.32□□□□□ -1.88
RNF34Q969K3 AL365265.1-201ENST00000621045 234 ntBASIC3.32□□□□□ -1.88
RNF34Q969K3 AC009487.2-201ENST00000420969 6821 ntBASIC3.32□□□□□ -1.88
RNF34Q969K3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.32□□□□□ -1.88
RNF34Q969K3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RNF34Q969K3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RNF34Q969K3 RNU6-525P-201ENST00000363685 104 ntBASIC3.31□□□□□ -1.88
RNF34Q969K3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF34Q969K3 OOSP1P1-201ENST00000423265 274 ntBASIC3.31□□□□□ -1.88
RNF34Q969K3 AL353705.1-201ENST00000433468 480 ntBASIC3.31□□□□□ -1.88
RNF34Q969K3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF34Q969K3 Y_RNA.637-201ENST00000459424 114 ntBASIC3.31□□□□□ -1.88
RNF34Q969K3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.31□□□□□ -1.88
RNF34Q969K3 AC010598.1-201ENST00000510378 103 ntBASIC3.31□□□□□ -1.88
RNF34Q969K3 HMGB3P3-201ENST00000510526 400 ntBASIC3.31□□□□□ -1.88
RNF34Q969K3 SNORA74D-201ENST00000516404 141 ntBASIC3.31□□□□□ -1.88
RNF34Q969K3 NDUFA5P6-201ENST00000542110 379 ntBASIC3.31□□□□□ -1.88
RNF34Q969K3 AC091953.5-201ENST00000622919 233 ntBASIC3.31□□□□□ -1.88
RNF34Q969K3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF34Q969K3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.3□□□□□ -1.88
RNF34Q969K3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RNF34Q969K3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.3□□□□□ -1.88
RNF34Q969K3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.3□□□□□ -1.88
RNF34Q969K3 SNORD114-7-201ENST00000362520 77 ntBASIC3.3□□□□□ -1.88
RNF34Q969K3 RNU6-271P-201ENST00000363858 105 ntBASIC3.3□□□□□ -1.88
RNF34Q969K3 RNU6-1240P-201ENST00000365155 104 ntBASIC3.3□□□□□ -1.88
RNF34Q969K3 Y_RNA.361-201ENST00000365515 120 ntBASIC3.3□□□□□ -1.88
RNF34Q969K3 SNORA9-201ENST00000384215 133 ntBASIC3.3□□□□□ -1.88
RNF34Q969K3 SNORA20B-201ENST00000384220 132 ntBASIC3.3□□□□□ -1.88
RNF34Q969K3 RNU6-763P-201ENST00000390865 106 ntBASIC3.3□□□□□ -1.88
RNF34Q969K3 RPL32P35-201ENST00000415214 394 ntBASIC3.3□□□□□ -1.88
RNF34Q969K3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF34Q969K3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.3□□□□□ -1.88
RNF34Q969K3 RNU7-26P-201ENST00000458980 63 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms