Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 MIR6840-201ENST00000611937 71 ntBASIC2.09□□□□□ -2.07
TM9SF4Q92544 MIR219B-201ENST00000637023 88 ntBASIC2.09□□□□□ -2.07
TM9SF4Q92544 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.09□□□□□ -2.07
TM9SF4Q92544 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.08
TM9SF4Q92544 RNU1-76P-201ENST00000362903 159 ntBASIC2.08□□□□□ -2.08
TM9SF4Q92544 Y_RNA.105-201ENST00000363182 111 ntBASIC2.08□□□□□ -2.08
TM9SF4Q92544 RNU6-806P-201ENST00000365147 105 ntBASIC2.08□□□□□ -2.08
TM9SF4Q92544 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.08□□□□□ -2.08
TM9SF4Q92544 Y_RNA.458-201ENST00000384240 102 ntBASIC2.08□□□□□ -2.08
TM9SF4Q92544 Y_RNA.471-201ENST00000384312 102 ntBASIC2.08□□□□□ -2.08
TM9SF4Q92544 MIR29B2-201ENST00000385055 81 ntBASIC2.08□□□□□ -2.08
TM9SF4Q92544 RNU6-482P-201ENST00000391068 107 ntBASIC2.08□□□□□ -2.08
TM9SF4Q92544 HMGN2P3-201ENST00000433603 273 ntBASIC2.08□□□□□ -2.08
TM9SF4Q92544 HMGN2P5-201ENST00000436882 273 ntBASIC2.08□□□□□ -2.08
TM9SF4Q92544 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.08□□□□□ -2.08
TM9SF4Q92544 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.08□□□□□ -2.08
TM9SF4Q92544 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.08□□□□□ -2.08
TM9SF4Q92544 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.08□□□□□ -2.08
TM9SF4Q92544 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.08□□□□□ -2.08
TM9SF4Q92544 AC067942.3-201ENST00000512025 362 ntBASIC2.08□□□□□ -2.08
TM9SF4Q92544 RNA5SP54-201ENST00000516951 92 ntBASIC2.08□□□□□ -2.08
TM9SF4Q92544 MIR2355-201ENST00000517199 87 ntBASIC2.08□□□□□ -2.08
TM9SF4Q92544 RNU6-586P-201ENST00000517265 104 ntBASIC2.08□□□□□ -2.08
TM9SF4Q92544 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.08□□□□□ -2.08
TM9SF4Q92544 AL355297.3-201ENST00000604082 446 ntBASIC2.08□□□□□ -2.08
TM9SF4Q92544 SNORD14A-201ENST00000606526 91 ntBASIC2.08□□□□□ -2.08
TM9SF4Q92544 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.08□□□□□ -2.08
TM9SF4Q92544 AC005562.2-201ENST00000618264 111 ntBASIC2.08□□□□□ -2.08
TM9SF4Q92544 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.08□□□□□ -2.08
TM9SF4Q92544 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
TM9SF4Q92544 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
TM9SF4Q92544 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TM9SF4Q92544 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
TM9SF4Q92544 AL596028.1-201ENST00000326971 197 ntBASIC2.07□□□□□ -2.08
TM9SF4Q92544 RNU6-727P-201ENST00000363592 107 ntBASIC2.07□□□□□ -2.08
TM9SF4Q92544 RNU4-50P-201ENST00000364361 141 ntBASIC2.07□□□□□ -2.08
TM9SF4Q92544 RNA5SP125-201ENST00000364843 120 ntBASIC2.07□□□□□ -2.08
TM9SF4Q92544 SNORA6-201ENST00000384033 151 ntBASIC2.07□□□□□ -2.08
TM9SF4Q92544 RNU6-1145P-201ENST00000384246 107 ntBASIC2.07□□□□□ -2.08
TM9SF4Q92544 RPL21P1-201ENST00000399532 476 ntBASIC2.07□□□□□ -2.08
TM9SF4Q92544 SNORD12B-201ENST00000410433 91 ntBASIC2.07□□□□□ -2.08
TM9SF4Q92544 RNA5SP504-201ENST00000410676 117 ntBASIC2.07□□□□□ -2.08
TM9SF4Q92544 ELOCP20-201ENST00000422460 345 ntBASIC2.07□□□□□ -2.08
TM9SF4Q92544 SDAD1P3-201ENST00000427380 333 ntBASIC2.07□□□□□ -2.08
TM9SF4Q92544 RPS15AP28-201ENST00000435088 386 ntBASIC2.07□□□□□ -2.08
TM9SF4Q92544 AC004386.2-201ENST00000441858 148 ntBASIC2.07□□□□□ -2.08
TM9SF4Q92544 RPL26P26-201ENST00000480251 434 ntBASIC2.07□□□□□ -2.08
TM9SF4Q92544 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.07□□□□□ -2.08
TM9SF4Q92544 RNU6-965P-201ENST00000516721 96 ntBASIC2.07□□□□□ -2.08
TM9SF4Q92544 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.07□□□□□ -2.08
TM9SF4Q92544 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.07□□□□□ -2.08
TM9SF4Q92544 RPS29P30-201ENST00000600975 111 ntBASIC2.07□□□□□ -2.08
TM9SF4Q92544 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.07□□□□□ -2.08
TM9SF4Q92544 AC012640.5-201ENST00000623897 319 ntBASIC2.07□□□□□ -2.08
TM9SF4Q92544 MTND5P6-201ENST00000422338 1798 ntBASIC2.07□□□□□ -2.08
TM9SF4Q92544 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.06□□□□□ -2.08
TM9SF4Q92544 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
TM9SF4Q92544 SNORA3A-201ENST00000364113 130 ntBASIC2.06□□□□□ -2.08
TM9SF4Q92544 Y_RNA.214-201ENST00000364201 112 ntBASIC2.06□□□□□ -2.08
TM9SF4Q92544 Y_RNA.380-201ENST00000365663 111 ntBASIC2.06□□□□□ -2.08
TM9SF4Q92544 RNU6-574P-201ENST00000384265 107 ntBASIC2.06□□□□□ -2.08
TM9SF4Q92544 Y_RNA.551-201ENST00000384661 102 ntBASIC2.06□□□□□ -2.08
TM9SF4Q92544 MIR221-201ENST00000385135 110 ntBASIC2.06□□□□□ -2.08
TM9SF4Q92544 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
TM9SF4Q92544 SNORD78.2-201ENST00000391076 69 ntBASIC2.06□□□□□ -2.08
TM9SF4Q92544 AL079342.1-201ENST00000401460 267 ntBASIC2.06□□□□□ -2.08
TM9SF4Q92544 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.06□□□□□ -2.08
TM9SF4Q92544 AL591806.2-201ENST00000433122 173 ntBASIC2.06□□□□□ -2.08
TM9SF4Q92544 RNA5SP200-201ENST00000516360 103 ntBASIC2.06□□□□□ -2.08
TM9SF4Q92544 RNU6-635P-201ENST00000516651 102 ntBASIC2.06□□□□□ -2.08
TM9SF4Q92544 RN7SKP49-201ENST00000516675 260 ntBASIC2.06□□□□□ -2.08
TM9SF4Q92544 RNU6-1198P-201ENST00000516904 67 ntBASIC2.06□□□□□ -2.08
TM9SF4Q92544 RNU6-897P-201ENST00000517135 105 ntBASIC2.06□□□□□ -2.08
TM9SF4Q92544 RRN3P3-201ENST00000549207 578 ntBASIC2.06□□□□□ -2.08
TM9SF4Q92544 AC015712.3-201ENST00000559380 164 ntBASIC2.06□□□□□ -2.08
TM9SF4Q92544 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.06□□□□□ -2.08
TM9SF4Q92544 AC008269.2-201ENST00000561915 1105 ntBASIC2.06□□□□□ -2.08
TM9SF4Q92544 MIR4659A-201ENST00000580269 81 ntBASIC2.06□□□□□ -2.08
TM9SF4Q92544 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.06□□□□□ -2.08
TM9SF4Q92544 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.06□□□□□ -2.08
TM9SF4Q92544 AC010999.1-201ENST00000611856 324 ntBASIC2.06□□□□□ -2.08
TM9SF4Q92544 AC240442.1-201ENST00000616055 283 ntBASIC2.06□□□□□ -2.08
TM9SF4Q92544 MIR6766-201ENST00000622641 72 ntBASIC2.06□□□□□ -2.08
TM9SF4Q92544 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.06□□□□□ -2.08
TM9SF4Q92544 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
TM9SF4Q92544 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
TM9SF4Q92544 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
TM9SF4Q92544 RNU6-961P-201ENST00000363893 105 ntBASIC2.05□□□□□ -2.08
TM9SF4Q92544 RNU6-280P-201ENST00000364145 104 ntBASIC2.05□□□□□ -2.08
TM9SF4Q92544 Y_RNA.415-201ENST00000384012 112 ntBASIC2.05□□□□□ -2.08
TM9SF4Q92544 RNU6-245P-201ENST00000384020 107 ntBASIC2.05□□□□□ -2.08
TM9SF4Q92544 Y_RNA.526-201ENST00000384572 110 ntBASIC2.05□□□□□ -2.08
TM9SF4Q92544 MIR95-201ENST00000385072 81 ntBASIC2.05□□□□□ -2.08
TM9SF4Q92544 MIR1289-2-201ENST00000408360 111 ntBASIC2.05□□□□□ -2.08
TM9SF4Q92544 RNU6-121P-201ENST00000410525 99 ntBASIC2.05□□□□□ -2.08
TM9SF4Q92544 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.05□□□□□ -2.08
TM9SF4Q92544 FCF1P4-201ENST00000448326 183 ntBASIC2.05□□□□□ -2.08
TM9SF4Q92544 AC079804.2-201ENST00000490376 200 ntBASIC2.05□□□□□ -2.08
TM9SF4Q92544 ATP5EP1-201ENST00000510257 156 ntBASIC2.05□□□□□ -2.08
TM9SF4Q92544 SNORA40.9-201ENST00000515895 93 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms