Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 RNU6-1211P-201ENST00000459179 105 ntBASIC3.2□□□□□ -1.9
RNF111Q6ZNA4 FCF1P8-201ENST00000510322 597 ntBASIC3.2□□□□□ -1.9
RNF111Q6ZNA4 RNU7-115P-201ENST00000516433 55 ntBASIC3.2□□□□□ -1.9
RNF111Q6ZNA4 RNU6-1337P-201ENST00000516525 95 ntBASIC3.2□□□□□ -1.9
RNF111Q6ZNA4 AC027419.1-201ENST00000522976 328 ntBASIC3.2□□□□□ -1.9
RNF111Q6ZNA4 AC112693.2-201ENST00000556538 232 ntBASIC3.2□□□□□ -1.9
RNF111Q6ZNA4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.2□□□□□ -1.9
RNF111Q6ZNA4 AC019176.2-201ENST00000611579 315 ntBASIC3.2□□□□□ -1.9
RNF111Q6ZNA4 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.2□□□□□ -1.9
RNF111Q6ZNA4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
RNF111Q6ZNA4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNF111Q6ZNA4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNF111Q6ZNA4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RNF111Q6ZNA4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
RNF111Q6ZNA4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RNF111Q6ZNA4 RNU6-144P-201ENST00000383951 107 ntBASIC3.19□□□□□ -1.9
RNF111Q6ZNA4 RNU6-643P-201ENST00000384018 107 ntBASIC3.19□□□□□ -1.9
RNF111Q6ZNA4 Y_RNA.420-201ENST00000384043 110 ntBASIC3.19□□□□□ -1.9
RNF111Q6ZNA4 Y_RNA.542-201ENST00000384641 111 ntBASIC3.19□□□□□ -1.9
RNF111Q6ZNA4 MIR1294-201ENST00000408503 142 ntBASIC3.19□□□□□ -1.9
RNF111Q6ZNA4 RN7SKP111-201ENST00000410349 271 ntBASIC3.19□□□□□ -1.9
RNF111Q6ZNA4 SNORA36B-201ENST00000410438 131 ntBASIC3.19□□□□□ -1.9
RNF111Q6ZNA4 RN7SL293P-201ENST00000481765 281 ntBASIC3.19□□□□□ -1.9
RNF111Q6ZNA4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.19□□□□□ -1.9
RNF111Q6ZNA4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.19□□□□□ -1.9
RNF111Q6ZNA4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.19□□□□□ -1.9
RNF111Q6ZNA4 MIR4753-201ENST00000585119 83 ntBASIC3.19□□□□□ -1.9
RNF111Q6ZNA4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RNF111Q6ZNA4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.19□□□□□ -1.9
RNF111Q6ZNA4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RNF111Q6ZNA4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.19□□□□□ -1.9
RNF111Q6ZNA4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.19□□□□□ -1.9
RNF111Q6ZNA4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RNF111Q6ZNA4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RNF111Q6ZNA4 ZNF702P-202ENST00000434269 1966 ntBASIC3.18□□□□□ -1.9
RNF111Q6ZNA4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RNF111Q6ZNA4 Y_RNA.218-201ENST00000364218 104 ntBASIC3.18□□□□□ -1.9
RNF111Q6ZNA4 RNU6-1274P-201ENST00000384557 107 ntBASIC3.18□□□□□ -1.9
RNF111Q6ZNA4 RNU6-1228P-201ENST00000391014 107 ntBASIC3.18□□□□□ -1.9
RNF111Q6ZNA4 AC016717.1-201ENST00000448918 286 ntBASIC3.18□□□□□ -1.9
RNF111Q6ZNA4 AC091153.1-201ENST00000466297 402 ntBASIC3.18□□□□□ -1.9
RNF111Q6ZNA4 RNA5SP112-201ENST00000515937 99 ntBASIC3.18□□□□□ -1.9
RNF111Q6ZNA4 SCARNA17.1-201ENST00000516211 143 ntBASIC3.18□□□□□ -1.9
RNF111Q6ZNA4 SCARNA17.2-201ENST00000516334 143 ntBASIC3.18□□□□□ -1.9
RNF111Q6ZNA4 RNU6-1234P-201ENST00000516877 103 ntBASIC3.18□□□□□ -1.9
RNF111Q6ZNA4 MIR5688-201ENST00000580619 83 ntBASIC3.18□□□□□ -1.9
RNF111Q6ZNA4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RNF111Q6ZNA4 SCARNA17.4-201ENST00000614296 143 ntBASIC3.18□□□□□ -1.9
RNF111Q6ZNA4 AC012314.7-201ENST00000619693 93 ntBASIC3.18□□□□□ -1.9
RNF111Q6ZNA4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.18□□□□□ -1.9
RNF111Q6ZNA4 U6.98-201ENST00000637157 84 ntBASIC3.18□□□□□ -1.9
RNF111Q6ZNA4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.18□□□□□ -1.9
RNF111Q6ZNA4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.18□□□□□ -1.9
RNF111Q6ZNA4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
RNF111Q6ZNA4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.18□□□□□ -1.9
RNF111Q6ZNA4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RNF111Q6ZNA4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RNF111Q6ZNA4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF111Q6ZNA4 Y_RNA.71-201ENST00000362892 104 ntBASIC3.17□□□□□ -1.9
RNF111Q6ZNA4 RNU6-944P-201ENST00000364023 107 ntBASIC3.17□□□□□ -1.9
RNF111Q6ZNA4 RNU6-728P-201ENST00000365375 104 ntBASIC3.17□□□□□ -1.9
RNF111Q6ZNA4 MIR300-201ENST00000401138 83 ntBASIC3.17□□□□□ -1.9
RNF111Q6ZNA4 Y_RNA.629-201ENST00000411368 105 ntBASIC3.17□□□□□ -1.9
RNF111Q6ZNA4 RPL21P10-201ENST00000463521 490 ntBASIC3.17□□□□□ -1.9
RNF111Q6ZNA4 ATP5EP1-201ENST00000510257 156 ntBASIC3.17□□□□□ -1.9
RNF111Q6ZNA4 RNU6-1333P-201ENST00000516162 93 ntBASIC3.17□□□□□ -1.9
RNF111Q6ZNA4 IGKV2-26-201ENST00000518305 343 ntBASIC3.17□□□□□ -1.9
RNF111Q6ZNA4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.17□□□□□ -1.9
RNF111Q6ZNA4 LARP7P3-201ENST00000579888 337 ntBASIC3.17□□□□□ -1.9
RNF111Q6ZNA4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF111Q6ZNA4 AC023043.3-201ENST00000593113 385 ntBASIC3.17□□□□□ -1.9
RNF111Q6ZNA4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF111Q6ZNA4 AC017071.1-201ENST00000564407 2204 ntBASIC3.17□□□□□ -1.9
RNF111Q6ZNA4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
RNF111Q6ZNA4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RNF111Q6ZNA4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RNF111Q6ZNA4 AL356292.1-201ENST00000283110 373 ntBASIC3.16□□□□□ -1.9
RNF111Q6ZNA4 SNORA27.1-201ENST00000362604 124 ntBASIC3.16□□□□□ -1.9
RNF111Q6ZNA4 RNA5SP295-201ENST00000362655 121 ntBASIC3.16□□□□□ -1.9
RNF111Q6ZNA4 Y_RNA.127-201ENST00000363386 109 ntBASIC3.16□□□□□ -1.9
RNF111Q6ZNA4 RNA5SP205-201ENST00000364653 136 ntBASIC3.16□□□□□ -1.9
RNF111Q6ZNA4 MIR490-201ENST00000384865 128 ntBASIC3.16□□□□□ -1.9
RNF111Q6ZNA4 RNU6-57P-201ENST00000411348 103 ntBASIC3.16□□□□□ -1.9
RNF111Q6ZNA4 HSPE1P13-201ENST00000451143 297 ntBASIC3.16□□□□□ -1.9
RNF111Q6ZNA4 SNORD65B-201ENST00000459126 73 ntBASIC3.16□□□□□ -1.9
RNF111Q6ZNA4 AC114982.1-201ENST00000469402 321 ntBASIC3.16□□□□□ -1.9
RNF111Q6ZNA4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.16□□□□□ -1.9
RNF111Q6ZNA4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.16□□□□□ -1.9
RNF111Q6ZNA4 MRPS36P2-201ENST00000512569 299 ntBASIC3.16□□□□□ -1.9
RNF111Q6ZNA4 RNA5SP217-201ENST00000515959 91 ntBASIC3.16□□□□□ -1.9
RNF111Q6ZNA4 RNU6-711P-201ENST00000517255 106 ntBASIC3.16□□□□□ -1.9
RNF111Q6ZNA4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.16□□□□□ -1.9
RNF111Q6ZNA4 snoZ196.1-201ENST00000625269 89 ntBASIC3.16□□□□□ -1.9
RNF111Q6ZNA4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.16□□□□□ -1.9
RNF111Q6ZNA4 AL049781.1-201ENST00000623195 3585 ntBASIC3.16□□□□□ -1.9
RNF111Q6ZNA4 SNORD114-7-201ENST00000362520 77 ntBASIC3.15□□□□□ -1.91
RNF111Q6ZNA4 RNU6-234P-201ENST00000365229 104 ntBASIC3.15□□□□□ -1.91
RNF111Q6ZNA4 RNU6-1083P-201ENST00000384022 107 ntBASIC3.15□□□□□ -1.91
RNF111Q6ZNA4 SNORD20-201ENST00000384550 80 ntBASIC3.15□□□□□ -1.91
RNF111Q6ZNA4 Y_RNA.521-201ENST00000384560 114 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms