Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXR1Q6PIV2 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
FOXR1Q6PIV2 PWAR6-201ENST00000552334 4618 ntBASIC3.88□□□□□ -1.79
FOXR1Q6PIV2 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 SNORA60-201ENST00000362396 134 ntBASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 RNU6-1010P-201ENST00000362757 107 ntBASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 SNORA73.2-201ENST00000364946 201 ntBASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 SNORD6-201ENST00000365444 73 ntBASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 Y_RNA.366-201ENST00000365540 102 ntBASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 AL353705.1-201ENST00000433468 480 ntBASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 RBMY2UP-201ENST00000453474 324 ntBASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 SNORD11-201ENST00000459124 84 ntBASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 AC010401.1-201ENST00000463867 348 ntBASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 RN7SL442P-201ENST00000473804 320 ntBASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 AC083906.5-201ENST00000503722 328 ntBASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 RNA5SP20-201ENST00000515976 84 ntBASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 RNU6-1098P-201ENST00000516772 96 ntBASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 AC002064.3-201ENST00000623448 346 ntBASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 AL159152.1-201ENST00000635019 2587 ntBASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXR1Q6PIV2 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
FOXR1Q6PIV2 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXR1Q6PIV2 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.86□□□□□ -1.79
FOXR1Q6PIV2 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.86□□□□□ -1.79
FOXR1Q6PIV2 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
FOXR1Q6PIV2 Y_RNA.66-201ENST00000362862 102 ntBASIC3.86□□□□□ -1.79
FOXR1Q6PIV2 SNORA7.2-201ENST00000364446 145 ntBASIC3.86□□□□□ -1.79
FOXR1Q6PIV2 Y_RNA.544-201ENST00000384650 113 ntBASIC3.86□□□□□ -1.79
FOXR1Q6PIV2 SNORA1.3-201ENST00000384676 136 ntBASIC3.86□□□□□ -1.79
FOXR1Q6PIV2 MIR181A2-201ENST00000384863 110 ntBASIC3.86□□□□□ -1.79
FOXR1Q6PIV2 MIR450A2-201ENST00000385022 100 ntBASIC3.86□□□□□ -1.79
FOXR1Q6PIV2 MIR1251-201ENST00000408552 70 ntBASIC3.86□□□□□ -1.79
FOXR1Q6PIV2 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.86□□□□□ -1.79
FOXR1Q6PIV2 AC008155.2-201ENST00000464337 397 ntBASIC3.86□□□□□ -1.79
FOXR1Q6PIV2 HSPE1P7-201ENST00000604681 321 ntBASIC3.86□□□□□ -1.79
FOXR1Q6PIV2 SNORA51-201ENST00000606420 132 ntBASIC3.86□□□□□ -1.79
FOXR1Q6PIV2 AC019176.2-201ENST00000611579 315 ntBASIC3.86□□□□□ -1.79
FOXR1Q6PIV2 Pinc.1-201ENST00000616452 154 ntBASIC3.86□□□□□ -1.79
FOXR1Q6PIV2 MIR7151-201ENST00000617477 60 ntBASIC3.86□□□□□ -1.79
FOXR1Q6PIV2 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXR1Q6PIV2 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXR1Q6PIV2 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.86□□□□□ -1.79
FOXR1Q6PIV2 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXR1Q6PIV2 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
FOXR1Q6PIV2 AC007656.2-201ENST00000624902 4547 ntBASIC3.85□□□□□ -1.79
FOXR1Q6PIV2 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
FOXR1Q6PIV2 Y_RNA.203-201ENST00000364106 102 ntBASIC3.85□□□□□ -1.79
FOXR1Q6PIV2 RNA5SP97-201ENST00000365006 84 ntBASIC3.85□□□□□ -1.79
FOXR1Q6PIV2 RNU6-820P-201ENST00000384273 107 ntBASIC3.85□□□□□ -1.79
FOXR1Q6PIV2 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.85□□□□□ -1.79
FOXR1Q6PIV2 RNU7-57P-201ENST00000459540 60 ntBASIC3.85□□□□□ -1.79
FOXR1Q6PIV2 RN7SL271P-201ENST00000487601 295 ntBASIC3.85□□□□□ -1.79
FOXR1Q6PIV2 RNA5SP208-201ENST00000516156 78 ntBASIC3.85□□□□□ -1.79
FOXR1Q6PIV2 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.85□□□□□ -1.79
FOXR1Q6PIV2 RNA5SP179-201ENST00000517284 121 ntBASIC3.85□□□□□ -1.79
FOXR1Q6PIV2 AC134878.1-201ENST00000619901 243 ntBASIC3.85□□□□□ -1.79
FOXR1Q6PIV2 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.85□□□□□ -1.79
FOXR1Q6PIV2 CEP170P1-201ENST00000502249 4587 ntBASIC3.85□□□□□ -1.79
FOXR1Q6PIV2 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
FOXR1Q6PIV2 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.84□□□□□ -1.79
FOXR1Q6PIV2 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.84□□□□□ -1.79
FOXR1Q6PIV2 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.84□□□□□ -1.79
FOXR1Q6PIV2 Y_RNA.220-201ENST00000364244 109 ntBASIC3.84□□□□□ -1.79
FOXR1Q6PIV2 Y_RNA.796-201ENST00000364268 102 ntBASIC3.84□□□□□ -1.79
FOXR1Q6PIV2 Y_RNA.799-201ENST00000364992 102 ntBASIC3.84□□□□□ -1.79
FOXR1Q6PIV2 RNU6-972P-201ENST00000391208 107 ntBASIC3.84□□□□□ -1.79
FOXR1Q6PIV2 RNA5SP136-201ENST00000410906 107 ntBASIC3.84□□□□□ -1.79
FOXR1Q6PIV2 RPS3AP1-201ENST00000413190 320 ntBASIC3.84□□□□□ -1.79
FOXR1Q6PIV2 MTATP8P2-201ENST00000435212 202 ntBASIC3.84□□□□□ -1.79
FOXR1Q6PIV2 MTATP6P21-201ENST00000440681 189 ntBASIC3.84□□□□□ -1.79
FOXR1Q6PIV2 AC245102.2-201ENST00000448956 180 ntBASIC3.84□□□□□ -1.79
FOXR1Q6PIV2 RPL27AP5-201ENST00000469428 449 ntBASIC3.84□□□□□ -1.79
FOXR1Q6PIV2 RNU7-149P-201ENST00000516739 59 ntBASIC3.84□□□□□ -1.79
FOXR1Q6PIV2 RN7SKP289-201ENST00000517244 295 ntBASIC3.84□□□□□ -1.79
FOXR1Q6PIV2 AC008011.1-201ENST00000545989 227 ntBASIC3.84□□□□□ -1.79
FOXR1Q6PIV2 CYCSP30-201ENST00000546447 172 ntBASIC3.84□□□□□ -1.79
FOXR1Q6PIV2 AL365205.2-201ENST00000594586 68 ntBASIC3.84□□□□□ -1.79
FOXR1Q6PIV2 AC091167.4-201ENST00000605079 184 ntBASIC3.84□□□□□ -1.79
FOXR1Q6PIV2 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.84□□□□□ -1.79
FOXR1Q6PIV2 AC025521.1-201ENST00000621624 286 ntBASIC3.84□□□□□ -1.79
FOXR1Q6PIV2 AC009093.8-201ENST00000641769 292 ntBASIC3.84□□□□□ -1.79
FOXR1Q6PIV2 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
FOXR1Q6PIV2 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.83□□□□□ -1.8
FOXR1Q6PIV2 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
FOXR1Q6PIV2 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.83□□□□□ -1.8
FOXR1Q6PIV2 RNU6-228P-201ENST00000362700 106 ntBASIC3.83□□□□□ -1.8
FOXR1Q6PIV2 RNU6-1209P-201ENST00000363655 107 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms