Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 SNORA26-201ENST00000391286 122 ntBASIC4.22□□□□□ -1.73
PRPF38BQ5VTL8 HDGFP1-201ENST00000405943 252 ntBASIC4.22□□□□□ -1.73
PRPF38BQ5VTL8 Y_RNA.617-201ENST00000410920 90 ntBASIC4.22□□□□□ -1.73
PRPF38BQ5VTL8 DBIP2-201ENST00000419076 262 ntBASIC4.22□□□□□ -1.73
PRPF38BQ5VTL8 RPL39P40-201ENST00000445481 146 ntBASIC4.22□□□□□ -1.73
PRPF38BQ5VTL8 RNU6-498P-201ENST00000459468 107 ntBASIC4.22□□□□□ -1.73
PRPF38BQ5VTL8 RPS29P21-201ENST00000496272 170 ntBASIC4.22□□□□□ -1.73
PRPF38BQ5VTL8 RNA5SP341-201ENST00000516261 117 ntBASIC4.22□□□□□ -1.73
PRPF38BQ5VTL8 AC105245.1-201ENST00000581934 244 ntBASIC4.22□□□□□ -1.73
PRPF38BQ5VTL8 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.22□□□□□ -1.73
PRPF38BQ5VTL8 AL033523.1-201ENST00000605153 153 ntBASIC4.22□□□□□ -1.73
PRPF38BQ5VTL8 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRPF38BQ5VTL8 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PRPF38BQ5VTL8 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PRPF38BQ5VTL8 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.22□□□□□ -1.73
PRPF38BQ5VTL8 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PRPF38BQ5VTL8 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PRPF38BQ5VTL8 AC009487.4-201ENST00000624969 3585 ntBASIC4.22□□□□□ -1.73
PRPF38BQ5VTL8 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PRPF38BQ5VTL8 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.21□□□□□ -1.73
PRPF38BQ5VTL8 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.21□□□□□ -1.74
PRPF38BQ5VTL8 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
PRPF38BQ5VTL8 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PRPF38BQ5VTL8 RNU6-647P-201ENST00000364243 107 ntBASIC4.21□□□□□ -1.74
PRPF38BQ5VTL8 Y_RNA.634-201ENST00000364811 113 ntBASIC4.21□□□□□ -1.74
PRPF38BQ5VTL8 RNU6-117P-201ENST00000365415 107 ntBASIC4.21□□□□□ -1.74
PRPF38BQ5VTL8 RNU6-880P-201ENST00000384526 107 ntBASIC4.21□□□□□ -1.74
PRPF38BQ5VTL8 AC126124.2-201ENST00000413542 321 ntBASIC4.21□□□□□ -1.74
PRPF38BQ5VTL8 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.21□□□□□ -1.74
PRPF38BQ5VTL8 RN7SL504P-201ENST00000494496 287 ntBASIC4.21□□□□□ -1.74
PRPF38BQ5VTL8 SNORD77.4-201ENST00000516158 81 ntBASIC4.21□□□□□ -1.74
PRPF38BQ5VTL8 SNORA18.4-201ENST00000516440 124 ntBASIC4.21□□□□□ -1.74
PRPF38BQ5VTL8 RNU2-60P-201ENST00000517290 128 ntBASIC4.21□□□□□ -1.74
PRPF38BQ5VTL8 RMST_8.1-201ENST00000610287 165 ntBASIC4.21□□□□□ -1.74
PRPF38BQ5VTL8 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRPF38BQ5VTL8 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.21□□□□□ -1.74
PRPF38BQ5VTL8 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRPF38BQ5VTL8 AC093908.1-201ENST00000623125 8092 ntBASIC4.2□□□□□ -1.74
PRPF38BQ5VTL8 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PRPF38BQ5VTL8 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRPF38BQ5VTL8 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
PRPF38BQ5VTL8 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PRPF38BQ5VTL8 AL603914.1-201ENST00000401964 204 ntBASIC4.2□□□□□ -1.74
PRPF38BQ5VTL8 MIR1183-201ENST00000408856 89 ntBASIC4.2□□□□□ -1.74
PRPF38BQ5VTL8 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.2□□□□□ -1.74
PRPF38BQ5VTL8 AC009414.1-201ENST00000427200 443 ntBASIC4.2□□□□□ -1.74
PRPF38BQ5VTL8 RPL30P4-201ENST00000429309 333 ntBASIC4.2□□□□□ -1.74
PRPF38BQ5VTL8 RNU6-781P-201ENST00000516377 101 ntBASIC4.2□□□□□ -1.74
PRPF38BQ5VTL8 RNU6-965P-201ENST00000516721 96 ntBASIC4.2□□□□□ -1.74
PRPF38BQ5VTL8 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.2□□□□□ -1.74
PRPF38BQ5VTL8 MIR4435-1-201ENST00000582552 80 ntBASIC4.2□□□□□ -1.74
PRPF38BQ5VTL8 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRPF38BQ5VTL8 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PRPF38BQ5VTL8 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
PRPF38BQ5VTL8 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
PRPF38BQ5VTL8 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRPF38BQ5VTL8 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.19□□□□□ -1.74
PRPF38BQ5VTL8 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRPF38BQ5VTL8 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRPF38BQ5VTL8 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRPF38BQ5VTL8 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRPF38BQ5VTL8 MIR548A1-201ENST00000385041 97 ntBASIC4.19□□□□□ -1.74
PRPF38BQ5VTL8 RNA5SP146-201ENST00000410743 123 ntBASIC4.19□□□□□ -1.74
PRPF38BQ5VTL8 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.19□□□□□ -1.74
PRPF38BQ5VTL8 AC107083.1-201ENST00000439643 279 ntBASIC4.19□□□□□ -1.74
PRPF38BQ5VTL8 RPS26P45-201ENST00000471748 340 ntBASIC4.19□□□□□ -1.74
PRPF38BQ5VTL8 RNA5SP446-201ENST00000515955 82 ntBASIC4.19□□□□□ -1.74
PRPF38BQ5VTL8 RNA5SP164-201ENST00000516533 110 ntBASIC4.19□□□□□ -1.74
PRPF38BQ5VTL8 RNU7-172P-201ENST00000517125 64 ntBASIC4.19□□□□□ -1.74
PRPF38BQ5VTL8 MIR3162-201ENST00000581818 82 ntBASIC4.19□□□□□ -1.74
PRPF38BQ5VTL8 MIR4438-201ENST00000585271 93 ntBASIC4.19□□□□□ -1.74
PRPF38BQ5VTL8 Pinc.1-201ENST00000616452 154 ntBASIC4.19□□□□□ -1.74
PRPF38BQ5VTL8 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.19□□□□□ -1.74
PRPF38BQ5VTL8 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
PRPF38BQ5VTL8 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PRPF38BQ5VTL8 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.19□□□□□ -1.74
PRPF38BQ5VTL8 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PRPF38BQ5VTL8 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRPF38BQ5VTL8 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.18□□□□□ -1.74
PRPF38BQ5VTL8 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRPF38BQ5VTL8 RPS4XP11-201ENST00000446897 772 ntBASIC4.18□□□□□ -1.74
PRPF38BQ5VTL8 SCARNA17.1-201ENST00000516211 143 ntBASIC4.18□□□□□ -1.74
PRPF38BQ5VTL8 SCARNA17.2-201ENST00000516334 143 ntBASIC4.18□□□□□ -1.74
PRPF38BQ5VTL8 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
PRPF38BQ5VTL8 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
PRPF38BQ5VTL8 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.18□□□□□ -1.74
PRPF38BQ5VTL8 JPX_2.1-201ENST00000614161 69 ntBASIC4.18□□□□□ -1.74
PRPF38BQ5VTL8 SCARNA17.4-201ENST00000614296 143 ntBASIC4.18□□□□□ -1.74
PRPF38BQ5VTL8 UCA1.1-201ENST00000620952 75 ntBASIC4.18□□□□□ -1.74
PRPF38BQ5VTL8 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.18□□□□□ -1.74
PRPF38BQ5VTL8 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.18□□□□□ -1.74
PRPF38BQ5VTL8 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRPF38BQ5VTL8 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.18□□□□□ -1.74
PRPF38BQ5VTL8 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRPF38BQ5VTL8 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRPF38BQ5VTL8 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRPF38BQ5VTL8 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRPF38BQ5VTL8 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
PRPF38BQ5VTL8 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PRPF38BQ5VTL8 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms