Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
ECM1Q16610 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
ECM1Q16610 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ECM1Q16610 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.73□□□□□ -1.81
ECM1Q16610 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ECM1Q16610 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.73□□□□□ -1.81
ECM1Q16610 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ECM1Q16610 Y_RNA.172-201ENST00000363765 102 ntBASIC3.73□□□□□ -1.81
ECM1Q16610 SNORA72.4-201ENST00000384174 132 ntBASIC3.73□□□□□ -1.81
ECM1Q16610 Y_RNA.525-201ENST00000384570 113 ntBASIC3.73□□□□□ -1.81
ECM1Q16610 MIR873-201ENST00000401120 77 ntBASIC3.73□□□□□ -1.81
ECM1Q16610 Z98941.1-201ENST00000407764 100 ntBASIC3.73□□□□□ -1.81
ECM1Q16610 RPL30P4-201ENST00000429309 333 ntBASIC3.73□□□□□ -1.81
ECM1Q16610 AL357134.1-201ENST00000445848 426 ntBASIC3.73□□□□□ -1.81
ECM1Q16610 HSPE1P13-201ENST00000451143 297 ntBASIC3.73□□□□□ -1.81
ECM1Q16610 EEF1B2P7-201ENST00000451177 676 ntBASIC3.73□□□□□ -1.81
ECM1Q16610 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.73□□□□□ -1.81
ECM1Q16610 CENPBD1P1-201ENST00000464061 469 ntBASIC3.73□□□□□ -1.81
ECM1Q16610 RN7SKP164-201ENST00000516138 266 ntBASIC3.73□□□□□ -1.81
ECM1Q16610 AC022616.8-201ENST00000533569 253 ntBASIC3.73□□□□□ -1.81
ECM1Q16610 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.73□□□□□ -1.81
ECM1Q16610 AC023043.3-201ENST00000593113 385 ntBASIC3.73□□□□□ -1.81
ECM1Q16610 AC025754.2-201ENST00000606491 432 ntBASIC3.73□□□□□ -1.81
ECM1Q16610 RMST_8.1-201ENST00000610287 165 ntBASIC3.73□□□□□ -1.81
ECM1Q16610 RNVU1-4-201ENST00000612985 164 ntBASIC3.73□□□□□ -1.81
ECM1Q16610 AC002064.3-201ENST00000623448 346 ntBASIC3.73□□□□□ -1.81
ECM1Q16610 AC006435.5-201ENST00000624486 112 ntBASIC3.73□□□□□ -1.81
ECM1Q16610 MIR3658-201ENST00000636291 56 ntBASIC3.73□□□□□ -1.81
ECM1Q16610 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ECM1Q16610 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.73□□□□□ -1.81
ECM1Q16610 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.73□□□□□ -1.81
ECM1Q16610 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ECM1Q16610 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
ECM1Q16610 RNU6-801P-201ENST00000364087 105 ntBASIC3.72□□□□□ -1.81
ECM1Q16610 Y_RNA.361-201ENST00000365515 120 ntBASIC3.72□□□□□ -1.81
ECM1Q16610 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ECM1Q16610 RNVU1-14-201ENST00000384770 164 ntBASIC3.72□□□□□ -1.81
ECM1Q16610 MIR184-201ENST00000384962 84 ntBASIC3.72□□□□□ -1.81
ECM1Q16610 FO393413.1-201ENST00000402892 195 ntBASIC3.72□□□□□ -1.81
ECM1Q16610 AL138878.1-201ENST00000405131 347 ntBASIC3.72□□□□□ -1.81
ECM1Q16610 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.72□□□□□ -1.81
ECM1Q16610 AC009969.1-201ENST00000438726 172 ntBASIC3.72□□□□□ -1.81
ECM1Q16610 RNU6-221P-201ENST00000459541 99 ntBASIC3.72□□□□□ -1.81
ECM1Q16610 RPL21P10-201ENST00000463521 490 ntBASIC3.72□□□□□ -1.81
ECM1Q16610 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.72□□□□□ -1.81
ECM1Q16610 Y_RNA.712-201ENST00000517011 92 ntBASIC3.72□□□□□ -1.81
ECM1Q16610 AC107934.2-201ENST00000518653 310 ntBASIC3.72□□□□□ -1.81
ECM1Q16610 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.72□□□□□ -1.81
ECM1Q16610 MIR3616-201ENST00000584070 92 ntBASIC3.72□□□□□ -1.81
ECM1Q16610 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.72□□□□□ -1.81
ECM1Q16610 AL449363.1-201ENST00000617815 186 ntBASIC3.72□□□□□ -1.81
ECM1Q16610 AL353746.1-201ENST00000566293 6881 ntBASIC3.72□□□□□ -1.81
ECM1Q16610 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.72□□□□□ -1.81
ECM1Q16610 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
ECM1Q16610 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
ECM1Q16610 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
ECM1Q16610 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
ECM1Q16610 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
ECM1Q16610 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ECM1Q16610 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.71□□□□□ -1.82
ECM1Q16610 RNU6-1205P-201ENST00000363625 106 ntBASIC3.71□□□□□ -1.82
ECM1Q16610 Y_RNA.333-201ENST00000365274 102 ntBASIC3.71□□□□□ -1.82
ECM1Q16610 SNORA11.1-201ENST00000408133 129 ntBASIC3.71□□□□□ -1.82
ECM1Q16610 RNA5SP229-201ENST00000410809 99 ntBASIC3.71□□□□□ -1.82
ECM1Q16610 AC063976.4-201ENST00000421971 163 ntBASIC3.71□□□□□ -1.82
ECM1Q16610 HSPE1P21-201ENST00000438283 308 ntBASIC3.71□□□□□ -1.82
ECM1Q16610 PRSS3P4-201ENST00000453323 162 ntBASIC3.71□□□□□ -1.82
ECM1Q16610 RNU7-107P-201ENST00000459121 61 ntBASIC3.71□□□□□ -1.82
ECM1Q16610 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.71□□□□□ -1.82
ECM1Q16610 MIR449C-201ENST00000516047 92 ntBASIC3.71□□□□□ -1.82
ECM1Q16610 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.71□□□□□ -1.82
ECM1Q16610 MIR4276-201ENST00000584832 70 ntBASIC3.71□□□□□ -1.82
ECM1Q16610 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.71□□□□□ -1.82
ECM1Q16610 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ECM1Q16610 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ECM1Q16610 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ECM1Q16610 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ECM1Q16610 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
ECM1Q16610 RNU6-944P-201ENST00000364023 107 ntBASIC3.7□□□□□ -1.82
ECM1Q16610 MIR34B-201ENST00000385076 84 ntBASIC3.7□□□□□ -1.82
ECM1Q16610 U8.19-201ENST00000459095 133 ntBASIC3.7□□□□□ -1.82
ECM1Q16610 AC010401.1-201ENST00000463867 348 ntBASIC3.7□□□□□ -1.82
ECM1Q16610 AC023141.11-201ENST00000508864 202 ntBASIC3.7□□□□□ -1.82
ECM1Q16610 Y_RNA.797-201ENST00000515977 94 ntBASIC3.7□□□□□ -1.82
ECM1Q16610 RN7SKP179-201ENST00000516126 217 ntBASIC3.7□□□□□ -1.82
ECM1Q16610 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.7□□□□□ -1.82
ECM1Q16610 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.7□□□□□ -1.82
ECM1Q16610 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ECM1Q16610 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ECM1Q16610 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ECM1Q16610 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ECM1Q16610 RNU6-1235P-201ENST00000384559 107 ntBASIC3.69□□□□□ -1.82
ECM1Q16610 RNU6-376P-201ENST00000384731 106 ntBASIC3.69□□□□□ -1.82
ECM1Q16610 RNU6-498P-201ENST00000459468 107 ntBASIC3.69□□□□□ -1.82
ECM1Q16610 SNORA4.4-201ENST00000515921 135 ntBASIC3.69□□□□□ -1.82
ECM1Q16610 AP001340.1-201ENST00000624405 217 ntBASIC3.69□□□□□ -1.82
ECM1Q16610 AC080128.1-201ENST00000474389 1917 ntBASIC3.69□□□□□ -1.82
ECM1Q16610 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ECM1Q16610 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
ECM1Q16610 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms