Protein–RNA interactions for Protein: Q15459

SF3A1, Splicing factor 3A subunit 1, humanhuman

Known RBP Predictions only

Length 793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1Q15459 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.13□□□□□ -1.91
SF3A1Q15459 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.13□□□□□ -1.91
SF3A1Q15459 MIR410-201ENST00000362222 80 ntBASIC3.12□□□□□ -1.91
SF3A1Q15459 Y_RNA.19-201ENST00000362462 99 ntBASIC3.12□□□□□ -1.91
SF3A1Q15459 RNA5SP493-201ENST00000364115 91 ntBASIC3.12□□□□□ -1.91
SF3A1Q15459 MIR524-201ENST00000385242 87 ntBASIC3.12□□□□□ -1.91
SF3A1Q15459 SNORA40.19-201ENST00000390846 128 ntBASIC3.12□□□□□ -1.91
SF3A1Q15459 MIR1253-201ENST00000408273 105 ntBASIC3.12□□□□□ -1.91
SF3A1Q15459 ELOCP20-201ENST00000422460 345 ntBASIC3.12□□□□□ -1.91
SF3A1Q15459 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.12□□□□□ -1.91
SF3A1Q15459 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SF3A1Q15459 RNU6-155P-201ENST00000516347 100 ntBASIC3.12□□□□□ -1.91
SF3A1Q15459 AC008269.2-201ENST00000561915 1105 ntBASIC3.12□□□□□ -1.91
SF3A1Q15459 AC136932.1-201ENST00000574771 208 ntBASIC3.12□□□□□ -1.91
SF3A1Q15459 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.12□□□□□ -1.91
SF3A1Q15459 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SF3A1Q15459 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SF3A1Q15459 RNU6-1309P-201ENST00000363305 108 ntBASIC3.11□□□□□ -1.91
SF3A1Q15459 RNU6-238P-201ENST00000363313 106 ntBASIC3.11□□□□□ -1.91
SF3A1Q15459 RNU6-770P-201ENST00000363929 105 ntBASIC3.11□□□□□ -1.91
SF3A1Q15459 Y_RNA.214-201ENST00000364201 112 ntBASIC3.11□□□□□ -1.91
SF3A1Q15459 RNU1-112P-201ENST00000364401 164 ntBASIC3.11□□□□□ -1.91
SF3A1Q15459 Y_RNA.276-201ENST00000364732 109 ntBASIC3.11□□□□□ -1.91
SF3A1Q15459 Y_RNA.462-201ENST00000384268 102 ntBASIC3.11□□□□□ -1.91
SF3A1Q15459 Y_RNA.570-201ENST00000384750 101 ntBASIC3.11□□□□□ -1.91
SF3A1Q15459 RNU6-713P-201ENST00000384761 107 ntBASIC3.11□□□□□ -1.91
SF3A1Q15459 HMGN2P39-201ENST00000398005 273 ntBASIC3.11□□□□□ -1.91
SF3A1Q15459 AL390729.2-201ENST00000416137 156 ntBASIC3.11□□□□□ -1.91
SF3A1Q15459 AL135938.1-201ENST00000443141 297 ntBASIC3.11□□□□□ -1.91
SF3A1Q15459 RNU1-131P-201ENST00000458943 161 ntBASIC3.11□□□□□ -1.91
SF3A1Q15459 RNU6-1143P-201ENST00000516125 104 ntBASIC3.11□□□□□ -1.91
SF3A1Q15459 RNU7-193P-201ENST00000516723 65 ntBASIC3.11□□□□□ -1.91
SF3A1Q15459 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.11□□□□□ -1.91
SF3A1Q15459 MIR4300-201ENST00000581016 96 ntBASIC3.11□□□□□ -1.91
SF3A1Q15459 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SF3A1Q15459 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.11□□□□□ -1.91
SF3A1Q15459 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SF3A1Q15459 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.1□□□□□ -1.91
SF3A1Q15459 RNU1-58P-201ENST00000362413 163 ntBASIC3.1□□□□□ -1.91
SF3A1Q15459 RNA5SP393-201ENST00000363423 117 ntBASIC3.1□□□□□ -1.91
SF3A1Q15459 RNU6-454P-201ENST00000364292 107 ntBASIC3.1□□□□□ -1.91
SF3A1Q15459 MIR518A2-201ENST00000384966 87 ntBASIC3.1□□□□□ -1.91
SF3A1Q15459 RNU4-30P-201ENST00000410245 143 ntBASIC3.1□□□□□ -1.91
SF3A1Q15459 Y_RNA.602-201ENST00000410535 92 ntBASIC3.1□□□□□ -1.91
SF3A1Q15459 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.1□□□□□ -1.91
SF3A1Q15459 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SF3A1Q15459 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.1□□□□□ -1.91
SF3A1Q15459 AC025647.1-201ENST00000517879 253 ntBASIC3.1□□□□□ -1.91
SF3A1Q15459 SUMO2P18-201ENST00000518873 252 ntBASIC3.1□□□□□ -1.91
SF3A1Q15459 AC027419.1-201ENST00000522976 328 ntBASIC3.1□□□□□ -1.91
SF3A1Q15459 AC079600.2-201ENST00000550076 130 ntBASIC3.1□□□□□ -1.91
SF3A1Q15459 MIR3124-201ENST00000582636 67 ntBASIC3.1□□□□□ -1.91
SF3A1Q15459 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.1□□□□□ -1.91
SF3A1Q15459 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.1□□□□□ -1.91
SF3A1Q15459 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SF3A1Q15459 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SF3A1Q15459 Z82195.2-201ENST00000612348 18351 ntBASIC3.09□□□□□ -1.91
SF3A1Q15459 Y_RNA.101-201ENST00000363154 102 ntBASIC3.09□□□□□ -1.91
SF3A1Q15459 SNORA67.1-201ENST00000364749 141 ntBASIC3.09□□□□□ -1.91
SF3A1Q15459 RNU6-1240P-201ENST00000365155 104 ntBASIC3.09□□□□□ -1.91
SF3A1Q15459 Y_RNA.331-201ENST00000365267 102 ntBASIC3.09□□□□□ -1.91
SF3A1Q15459 RNU11-3P-201ENST00000391111 133 ntBASIC3.09□□□□□ -1.91
SF3A1Q15459 RPL21P1-201ENST00000399532 476 ntBASIC3.09□□□□□ -1.91
SF3A1Q15459 AL138827.1-201ENST00000402666 306 ntBASIC3.09□□□□□ -1.91
SF3A1Q15459 HMGN2P34-201ENST00000437647 269 ntBASIC3.09□□□□□ -1.91
SF3A1Q15459 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.09□□□□□ -1.91
SF3A1Q15459 DYNLT3P2-201ENST00000442517 295 ntBASIC3.09□□□□□ -1.91
SF3A1Q15459 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.09□□□□□ -1.91
SF3A1Q15459 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.09□□□□□ -1.91
SF3A1Q15459 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.09□□□□□ -1.91
SF3A1Q15459 RNU6-1041P-201ENST00000516254 102 ntBASIC3.09□□□□□ -1.91
SF3A1Q15459 AL117187.1-201ENST00000555482 181 ntBASIC3.09□□□□□ -1.91
SF3A1Q15459 AC245884.12-201ENST00000615364 59 ntBASIC3.09□□□□□ -1.91
SF3A1Q15459 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SF3A1Q15459 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SF3A1Q15459 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
SF3A1Q15459 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.08□□□□□ -1.92
SF3A1Q15459 Y_RNA.105-201ENST00000363182 111 ntBASIC3.08□□□□□ -1.92
SF3A1Q15459 SNORD113-8-201ENST00000363497 74 ntBASIC3.08□□□□□ -1.92
SF3A1Q15459 RNU6-324P-201ENST00000363957 106 ntBASIC3.08□□□□□ -1.92
SF3A1Q15459 RNU6-806P-201ENST00000365147 105 ntBASIC3.08□□□□□ -1.92
SF3A1Q15459 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.08□□□□□ -1.92
SF3A1Q15459 SNORD63-201ENST00000384262 68 ntBASIC3.08□□□□□ -1.92
SF3A1Q15459 MIR597-201ENST00000384968 97 ntBASIC3.08□□□□□ -1.92
SF3A1Q15459 AC060773.1-201ENST00000421698 310 ntBASIC3.08□□□□□ -1.92
SF3A1Q15459 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
SF3A1Q15459 IPO7P1-201ENST00000442031 636 ntBASIC3.08□□□□□ -1.92
SF3A1Q15459 AL731563.1-201ENST00000442202 214 ntBASIC3.08□□□□□ -1.92
SF3A1Q15459 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.08□□□□□ -1.92
SF3A1Q15459 ATP5J2P3-201ENST00000451550 258 ntBASIC3.08□□□□□ -1.92
SF3A1Q15459 AC005042.3-201ENST00000453230 174 ntBASIC3.08□□□□□ -1.92
SF3A1Q15459 RN7SL429P-201ENST00000479090 223 ntBASIC3.08□□□□□ -1.92
SF3A1Q15459 RN7SL489P-201ENST00000486185 223 ntBASIC3.08□□□□□ -1.92
SF3A1Q15459 RN7SL327P-201ENST00000488659 223 ntBASIC3.08□□□□□ -1.92
SF3A1Q15459 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.08□□□□□ -1.92
SF3A1Q15459 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.08□□□□□ -1.92
SF3A1Q15459 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.08□□□□□ -1.92
SF3A1Q15459 MIR4423-201ENST00000580922 80 ntBASIC3.08□□□□□ -1.92
SF3A1Q15459 MIR4672-201ENST00000583126 81 ntBASIC3.08□□□□□ -1.92
SF3A1Q15459 RN7SL853P-201ENST00000617250 223 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms