Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 RNU6-545P-201ENST00000362681 104 ntBASIC2.77□□□□□ -1.97
CDC42EP1Q00587 SNORD81.1-201ENST00000363064 77 ntBASIC2.77□□□□□ -1.97
CDC42EP1Q00587 SNORA67.2-201ENST00000384300 149 ntBASIC2.77□□□□□ -1.97
CDC42EP1Q00587 Y_RNA.541-201ENST00000384640 113 ntBASIC2.77□□□□□ -1.97
CDC42EP1Q00587 AL359511.1-201ENST00000402970 211 ntBASIC2.77□□□□□ -1.97
CDC42EP1Q00587 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CDC42EP1Q00587 AC104389.3-201ENST00000445629 235 ntBASIC2.77□□□□□ -1.97
CDC42EP1Q00587 HSPE1P25-201ENST00000455484 251 ntBASIC2.77□□□□□ -1.97
CDC42EP1Q00587 RNA5SP24-201ENST00000516478 95 ntBASIC2.77□□□□□ -1.97
CDC42EP1Q00587 AC022616.8-201ENST00000533569 253 ntBASIC2.77□□□□□ -1.97
CDC42EP1Q00587 MIR4298-201ENST00000584380 73 ntBASIC2.77□□□□□ -1.97
CDC42EP1Q00587 AP001282.2-201ENST00000616149 309 ntBASIC2.77□□□□□ -1.97
CDC42EP1Q00587 AC006001.4-201ENST00000622243 395 ntBASIC2.77□□□□□ -1.97
CDC42EP1Q00587 AC091932.3-201ENST00000624223 323 ntBASIC2.77□□□□□ -1.97
CDC42EP1Q00587 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
CDC42EP1Q00587 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CDC42EP1Q00587 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.77□□□□□ -1.97
CDC42EP1Q00587 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CDC42EP1Q00587 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CDC42EP1Q00587 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.76□□□□□ -1.97
CDC42EP1Q00587 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.76□□□□□ -1.97
CDC42EP1Q00587 Y_RNA.16-201ENST00000362421 102 ntBASIC2.76□□□□□ -1.97
CDC42EP1Q00587 RNU6-743P-201ENST00000364151 106 ntBASIC2.76□□□□□ -1.97
CDC42EP1Q00587 Y_RNA.286-201ENST00000364813 102 ntBASIC2.76□□□□□ -1.97
CDC42EP1Q00587 RNA5SP125-201ENST00000364843 120 ntBASIC2.76□□□□□ -1.97
CDC42EP1Q00587 RNU6-1180P-201ENST00000364935 107 ntBASIC2.76□□□□□ -1.97
CDC42EP1Q00587 RNU6-290P-201ENST00000365212 101 ntBASIC2.76□□□□□ -1.97
CDC42EP1Q00587 Y_RNA.331-201ENST00000365267 102 ntBASIC2.76□□□□□ -1.97
CDC42EP1Q00587 MIR586-201ENST00000385035 97 ntBASIC2.76□□□□□ -1.97
CDC42EP1Q00587 MIR300-201ENST00000401138 83 ntBASIC2.76□□□□□ -1.97
CDC42EP1Q00587 RPL23AP36-201ENST00000413895 458 ntBASIC2.76□□□□□ -1.97
CDC42EP1Q00587 AC003685.2-201ENST00000422795 395 ntBASIC2.76□□□□□ -1.97
CDC42EP1Q00587 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.76□□□□□ -1.97
CDC42EP1Q00587 HMGN2P9-201ENST00000476875 229 ntBASIC2.76□□□□□ -1.97
CDC42EP1Q00587 ATP5EP1-201ENST00000510257 156 ntBASIC2.76□□□□□ -1.97
CDC42EP1Q00587 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.76□□□□□ -1.97
CDC42EP1Q00587 DEFB108E-201ENST00000524692 240 ntBASIC2.76□□□□□ -1.97
CDC42EP1Q00587 AP002001.1-203ENST00000534002 267 ntBASIC2.76□□□□□ -1.97
CDC42EP1Q00587 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.76□□□□□ -1.97
CDC42EP1Q00587 MIR4753-201ENST00000585119 83 ntBASIC2.76□□□□□ -1.97
CDC42EP1Q00587 MIR1248-201ENST00000629190 106 ntBASIC2.76□□□□□ -1.97
CDC42EP1Q00587 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.76□□□□□ -1.97
CDC42EP1Q00587 MTND5P6-201ENST00000422338 1798 ntBASIC2.76□□□□□ -1.97
CDC42EP1Q00587 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CDC42EP1Q00587 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
CDC42EP1Q00587 AL391987.6-201ENST00000305671 199 ntBASIC2.75□□□□□ -1.97
CDC42EP1Q00587 Y_RNA.14-201ENST00000362415 103 ntBASIC2.75□□□□□ -1.97
CDC42EP1Q00587 U3.8-201ENST00000363675 217 ntBASIC2.75□□□□□ -1.97
CDC42EP1Q00587 Y_RNA.237-201ENST00000364439 102 ntBASIC2.75□□□□□ -1.97
CDC42EP1Q00587 Y_RNA.350-201ENST00000365409 98 ntBASIC2.75□□□□□ -1.97
CDC42EP1Q00587 MIR592-201ENST00000384959 97 ntBASIC2.75□□□□□ -1.97
CDC42EP1Q00587 MT-TG-201ENST00000387429 68 ntBASIC2.75□□□□□ -1.97
CDC42EP1Q00587 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CDC42EP1Q00587 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CDC42EP1Q00587 MIR1283-1-201ENST00000408494 87 ntBASIC2.75□□□□□ -1.97
CDC42EP1Q00587 AC092427.1-202ENST00000430569 476 ntBASIC2.75□□□□□ -1.97
CDC42EP1Q00587 UBBP3-201ENST00000445497 241 ntBASIC2.75□□□□□ -1.97
CDC42EP1Q00587 RPL23AP3-201ENST00000453844 468 ntBASIC2.75□□□□□ -1.97
CDC42EP1Q00587 RPL39P38-201ENST00000467018 153 ntBASIC2.75□□□□□ -1.97
CDC42EP1Q00587 RNU6-1338P-201ENST00000516328 91 ntBASIC2.75□□□□□ -1.97
CDC42EP1Q00587 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.75□□□□□ -1.97
CDC42EP1Q00587 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.75□□□□□ -1.97
CDC42EP1Q00587 AC022441.3-201ENST00000605737 136 ntBASIC2.75□□□□□ -1.97
CDC42EP1Q00587 SDR42E1P4-201ENST00000620894 481 ntBASIC2.75□□□□□ -1.97
CDC42EP1Q00587 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.75□□□□□ -1.97
CDC42EP1Q00587 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.75□□□□□ -1.97
CDC42EP1Q00587 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CDC42EP1Q00587 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
CDC42EP1Q00587 MIR410-201ENST00000362222 80 ntBASIC2.74□□□□□ -1.97
CDC42EP1Q00587 Y_RNA.101-201ENST00000363154 102 ntBASIC2.74□□□□□ -1.97
CDC42EP1Q00587 RNU6-438P-201ENST00000365561 103 ntBASIC2.74□□□□□ -1.97
CDC42EP1Q00587 MIR518C-201ENST00000384822 101 ntBASIC2.74□□□□□ -1.97
CDC42EP1Q00587 MIR181B1-201ENST00000385240 110 ntBASIC2.74□□□□□ -1.97
CDC42EP1Q00587 AL357139.1-201ENST00000407792 426 ntBASIC2.74□□□□□ -1.97
CDC42EP1Q00587 TOMM22P2-201ENST00000430735 237 ntBASIC2.74□□□□□ -1.97
CDC42EP1Q00587 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.74□□□□□ -1.97
CDC42EP1Q00587 NDUFB4P10-201ENST00000452541 359 ntBASIC2.74□□□□□ -1.97
CDC42EP1Q00587 AC005042.3-201ENST00000453230 174 ntBASIC2.74□□□□□ -1.97
CDC42EP1Q00587 HMGB3P17-201ENST00000504195 649 ntBASIC2.74□□□□□ -1.97
CDC42EP1Q00587 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.74□□□□□ -1.97
CDC42EP1Q00587 SCARNA24.2-201ENST00000516968 130 ntBASIC2.74□□□□□ -1.97
CDC42EP1Q00587 RNA5SP490-201ENST00000517141 136 ntBASIC2.74□□□□□ -1.97
CDC42EP1Q00587 SNORA31.26-201ENST00000517250 137 ntBASIC2.74□□□□□ -1.97
CDC42EP1Q00587 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.74□□□□□ -1.97
CDC42EP1Q00587 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDC42EP1Q00587 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.74□□□□□ -1.97
CDC42EP1Q00587 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.73□□□□□ -1.97
CDC42EP1Q00587 SNORD31B-201ENST00000364977 69 ntBASIC2.73□□□□□ -1.97
CDC42EP1Q00587 Y_RNA.447-201ENST00000384184 113 ntBASIC2.73□□□□□ -1.97
CDC42EP1Q00587 Y_RNA.476-201ENST00000384347 108 ntBASIC2.73□□□□□ -1.97
CDC42EP1Q00587 Y_RNA.518-201ENST00000384552 113 ntBASIC2.73□□□□□ -1.97
CDC42EP1Q00587 MIR561-201ENST00000385216 97 ntBASIC2.73□□□□□ -1.97
CDC42EP1Q00587 MIR548B-201ENST00000385247 97 ntBASIC2.73□□□□□ -1.97
CDC42EP1Q00587 SNORA53-201ENST00000391141 249 ntBASIC2.73□□□□□ -1.97
CDC42EP1Q00587 AC009963.1-201ENST00000417265 157 ntBASIC2.73□□□□□ -1.97
CDC42EP1Q00587 AC074290.1-201ENST00000448883 135 ntBASIC2.73□□□□□ -1.97
CDC42EP1Q00587 AC114982.1-201ENST00000469402 321 ntBASIC2.73□□□□□ -1.97
CDC42EP1Q00587 RN7SL297P-201ENST00000483161 293 ntBASIC2.73□□□□□ -1.97
CDC42EP1Q00587 SRIP1-201ENST00000489235 288 ntBASIC2.73□□□□□ -1.97
CDC42EP1Q00587 RNA5SP385-201ENST00000515947 110 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms