Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.2□□□□□ -1.9
YBX1P67809 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.2□□□□□ -1.9
YBX1P67809 MIR6844-201ENST00000637122 62 ntBASIC3.2□□□□□ -1.9
YBX1P67809 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
YBX1P67809 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
YBX1P67809 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
YBX1P67809 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
YBX1P67809 AC010889.1-201ENST00000566193 2666 ntBASIC3.2□□□□□ -1.9
YBX1P67809 AL355596.1-201ENST00000565399 3996 ntBASIC3.19□□□□□ -1.9
YBX1P67809 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
YBX1P67809 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
YBX1P67809 AC010680.1-201ENST00000590024 3590 ntBASIC3.19□□□□□ -1.9
YBX1P67809 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
YBX1P67809 snoU2_19.1-201ENST00000362361 80 ntBASIC3.19□□□□□ -1.9
YBX1P67809 RNU6-655P-201ENST00000362858 107 ntBASIC3.19□□□□□ -1.9
YBX1P67809 SNORA38.1-201ENST00000364172 131 ntBASIC3.19□□□□□ -1.9
YBX1P67809 RNA5SP139-201ENST00000364340 117 ntBASIC3.19□□□□□ -1.9
YBX1P67809 RNU6-728P-201ENST00000365375 104 ntBASIC3.19□□□□□ -1.9
YBX1P67809 SNORA67.2-201ENST00000384300 149 ntBASIC3.19□□□□□ -1.9
YBX1P67809 MIR548B-201ENST00000385247 97 ntBASIC3.19□□□□□ -1.9
YBX1P67809 RNU6-1228P-201ENST00000391014 107 ntBASIC3.19□□□□□ -1.9
YBX1P67809 SNORA48.5-201ENST00000391143 135 ntBASIC3.19□□□□□ -1.9
YBX1P67809 AC245291.1-201ENST00000419501 328 ntBASIC3.19□□□□□ -1.9
YBX1P67809 AC005326.1-201ENST00000429197 123 ntBASIC3.19□□□□□ -1.9
YBX1P67809 AC115115.1-201ENST00000449927 248 ntBASIC3.19□□□□□ -1.9
YBX1P67809 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.19□□□□□ -1.9
YBX1P67809 RNU7-197P-201ENST00000458836 62 ntBASIC3.19□□□□□ -1.9
YBX1P67809 SNORA64.4-201ENST00000516632 81 ntBASIC3.19□□□□□ -1.9
YBX1P67809 RNU2-56P-201ENST00000516826 190 ntBASIC3.19□□□□□ -1.9
YBX1P67809 AC107934.2-201ENST00000518653 310 ntBASIC3.19□□□□□ -1.9
YBX1P67809 AP000867.2-201ENST00000532468 320 ntBASIC3.19□□□□□ -1.9
YBX1P67809 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.19□□□□□ -1.9
YBX1P67809 MIR5688-201ENST00000580619 83 ntBASIC3.19□□□□□ -1.9
YBX1P67809 AC025754.2-201ENST00000606491 432 ntBASIC3.19□□□□□ -1.9
YBX1P67809 ZNF702P-202ENST00000434269 1966 ntBASIC3.19□□□□□ -1.9
YBX1P67809 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.19□□□□□ -1.9
YBX1P67809 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.19□□□□□ -1.9
YBX1P67809 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.19□□□□□ -1.9
YBX1P67809 AL353746.1-201ENST00000566293 6881 ntBASIC3.19□□□□□ -1.9
YBX1P67809 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.19□□□□□ -1.9
YBX1P67809 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
YBX1P67809 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
YBX1P67809 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.18□□□□□ -1.9
YBX1P67809 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
YBX1P67809 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
YBX1P67809 RNU1-105P-201ENST00000363470 161 ntBASIC3.18□□□□□ -1.9
YBX1P67809 RNU6-1210P-201ENST00000363775 107 ntBASIC3.18□□□□□ -1.9
YBX1P67809 RNU6-1305P-201ENST00000364353 104 ntBASIC3.18□□□□□ -1.9
YBX1P67809 RNU6-153P-201ENST00000364422 104 ntBASIC3.18□□□□□ -1.9
YBX1P67809 SNORA14A-201ENST00000364773 135 ntBASIC3.18□□□□□ -1.9
YBX1P67809 RNU6-1180P-201ENST00000364935 107 ntBASIC3.18□□□□□ -1.9
YBX1P67809 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.18□□□□□ -1.9
YBX1P67809 RNU6-144P-201ENST00000383951 107 ntBASIC3.18□□□□□ -1.9
YBX1P67809 RNU6-198P-201ENST00000384258 104 ntBASIC3.18□□□□□ -1.9
YBX1P67809 AC010099.1-201ENST00000455434 375 ntBASIC3.18□□□□□ -1.9
YBX1P67809 AC092991.1-201ENST00000477176 376 ntBASIC3.18□□□□□ -1.9
YBX1P67809 RN7SL429P-201ENST00000479090 223 ntBASIC3.18□□□□□ -1.9
YBX1P67809 RN7SL489P-201ENST00000486185 223 ntBASIC3.18□□□□□ -1.9
YBX1P67809 RN7SL327P-201ENST00000488659 223 ntBASIC3.18□□□□□ -1.9
YBX1P67809 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.18□□□□□ -1.9
YBX1P67809 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.18□□□□□ -1.9
YBX1P67809 AC099778.2-201ENST00000610904 211 ntBASIC3.18□□□□□ -1.9
YBX1P67809 RN7SL853P-201ENST00000617250 223 ntBASIC3.18□□□□□ -1.9
YBX1P67809 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.18□□□□□ -1.9
YBX1P67809 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.18□□□□□ -1.9
YBX1P67809 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
YBX1P67809 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
YBX1P67809 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
YBX1P67809 AC069528.2-201ENST00000624849 1991 ntBASIC3.18□□□□□ -1.9
YBX1P67809 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
YBX1P67809 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
YBX1P67809 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.17□□□□□ -1.9
YBX1P67809 U8.7-201ENST00000364940 136 ntBASIC3.17□□□□□ -1.9
YBX1P67809 RNU6-1056P-201ENST00000383996 107 ntBASIC3.17□□□□□ -1.9
YBX1P67809 RNU6-768P-201ENST00000384683 107 ntBASIC3.17□□□□□ -1.9
YBX1P67809 RNU6-383P-201ENST00000410864 94 ntBASIC3.17□□□□□ -1.9
YBX1P67809 RNA5SP120-201ENST00000410900 112 ntBASIC3.17□□□□□ -1.9
YBX1P67809 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
YBX1P67809 AC112771.1-201ENST00000463581 102 ntBASIC3.17□□□□□ -1.9
YBX1P67809 AC068657.1-201ENST00000520807 306 ntBASIC3.17□□□□□ -1.9
YBX1P67809 AP001328.1-201ENST00000528550 176 ntBASIC3.17□□□□□ -1.9
YBX1P67809 MIR3646-201ENST00000578301 84 ntBASIC3.17□□□□□ -1.9
YBX1P67809 MIR7112-201ENST00000616126 65 ntBASIC3.17□□□□□ -1.9
YBX1P67809 MIR8057-201ENST00000620957 69 ntBASIC3.17□□□□□ -1.9
YBX1P67809 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
YBX1P67809 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
YBX1P67809 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.16□□□□□ -1.9
YBX1P67809 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.16□□□□□ -1.9
YBX1P67809 Y_RNA.361-201ENST00000365515 120 ntBASIC3.16□□□□□ -1.9
YBX1P67809 RNU6-805P-201ENST00000365643 106 ntBASIC3.16□□□□□ -1.9
YBX1P67809 SNORA12-201ENST00000391162 147 ntBASIC3.16□□□□□ -1.9
YBX1P67809 RNU1-101P-201ENST00000391171 127 ntBASIC3.16□□□□□ -1.9
YBX1P67809 RNU6-588P-201ENST00000410281 105 ntBASIC3.16□□□□□ -1.9
YBX1P67809 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.16□□□□□ -1.9
YBX1P67809 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.16□□□□□ -1.9
YBX1P67809 RPS27P1-201ENST00000450552 247 ntBASIC3.16□□□□□ -1.9
YBX1P67809 AC117454.1-201ENST00000491120 168 ntBASIC3.16□□□□□ -1.9
YBX1P67809 SNORA31.21-201ENST00000517180 77 ntBASIC3.16□□□□□ -1.9
YBX1P67809 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.16□□□□□ -1.9
YBX1P67809 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 516.2 ms