Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 RN7SL517P-201ENST00000462240 305 ntBASIC4.7□□□□□ -1.66
NUBP1P53384 RN7SL504P-201ENST00000494496 287 ntBASIC4.7□□□□□ -1.66
NUBP1P53384 AL163195.1-201ENST00000496941 348 ntBASIC4.7□□□□□ -1.66
NUBP1P53384 RN7SL558P-201ENST00000497468 299 ntBASIC4.7□□□□□ -1.66
NUBP1P53384 RN7SL636P-201ENST00000497504 294 ntBASIC4.7□□□□□ -1.66
NUBP1P53384 RPPH1-2P-201ENST00000516688 293 ntBASIC4.7□□□□□ -1.66
NUBP1P53384 RN7SKP57-201ENST00000517248 293 ntBASIC4.7□□□□□ -1.66
NUBP1P53384 AC090821.2-201ENST00000523552 176 ntBASIC4.7□□□□□ -1.66
NUBP1P53384 AC105129.1-201ENST00000560250 297 ntBASIC4.7□□□□□ -1.66
NUBP1P53384 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC4.7□□□□□ -1.66
NUBP1P53384 MIR4298-201ENST00000584380 73 ntBASIC4.7□□□□□ -1.66
NUBP1P53384 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.7□□□□□ -1.66
NUBP1P53384 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.7□□□□□ -1.66
NUBP1P53384 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
NUBP1P53384 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.7□□□□□ -1.66
NUBP1P53384 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUBP1P53384 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUBP1P53384 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NUBP1P53384 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
NUBP1P53384 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUBP1P53384 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUBP1P53384 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUBP1P53384 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
NUBP1P53384 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUBP1P53384 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUBP1P53384 Y_RNA.171-201ENST00000363760 102 ntBASIC4.69□□□□□ -1.66
NUBP1P53384 MIR95-201ENST00000385072 81 ntBASIC4.69□□□□□ -1.66
NUBP1P53384 CYCSP19-201ENST00000411715 316 ntBASIC4.69□□□□□ -1.66
NUBP1P53384 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.69□□□□□ -1.66
NUBP1P53384 UBL5P3-201ENST00000475112 231 ntBASIC4.69□□□□□ -1.66
NUBP1P53384 MIR8059-201ENST00000620427 81 ntBASIC4.69□□□□□ -1.66
NUBP1P53384 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
NUBP1P53384 AL355596.1-201ENST00000565399 3996 ntBASIC4.69□□□□□ -1.66
NUBP1P53384 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUBP1P53384 MFSD8-233ENST00000641482 4860 ntBASIC4.69□□□□□ -1.66
NUBP1P53384 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUBP1P53384 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
NUBP1P53384 Z82217.1-201ENST00000625157 8149 ntBASIC4.69□□□□□ -1.66
NUBP1P53384 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NUBP1P53384 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NUBP1P53384 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
NUBP1P53384 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NUBP1P53384 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NUBP1P53384 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NUBP1P53384 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
NUBP1P53384 SNORA63.1-201ENST00000362493 131 ntBASIC4.68□□□□□ -1.66
NUBP1P53384 RNA5SP513-201ENST00000364648 118 ntBASIC4.68□□□□□ -1.66
NUBP1P53384 MIR7-3-201ENST00000384898 110 ntBASIC4.68□□□□□ -1.66
NUBP1P53384 RNU6-1319P-201ENST00000390855 104 ntBASIC4.68□□□□□ -1.66
NUBP1P53384 RNU6-747P-201ENST00000390928 104 ntBASIC4.68□□□□□ -1.66
NUBP1P53384 RNU6-241P-201ENST00000391148 104 ntBASIC4.68□□□□□ -1.66
NUBP1P53384 RNU6-177P-201ENST00000411257 104 ntBASIC4.68□□□□□ -1.66
NUBP1P53384 RAB6C-AS1-202ENST00000433431 123 ntBASIC4.68□□□□□ -1.66
NUBP1P53384 AL135938.1-201ENST00000443141 297 ntBASIC4.68□□□□□ -1.66
NUBP1P53384 SNORA48.11-201ENST00000517015 89 ntBASIC4.68□□□□□ -1.66
NUBP1P53384 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.68□□□□□ -1.66
NUBP1P53384 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NUBP1P53384 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NUBP1P53384 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NUBP1P53384 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NUBP1P53384 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.68□□□□□ -1.66
NUBP1P53384 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
NUBP1P53384 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUBP1P53384 MIR383-201ENST00000362257 73 ntBASIC4.67□□□□□ -1.66
NUBP1P53384 RNU1-23P-201ENST00000363361 144 ntBASIC4.67□□□□□ -1.66
NUBP1P53384 SNORA25.6-201ENST00000364121 118 ntBASIC4.67□□□□□ -1.66
NUBP1P53384 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.67□□□□□ -1.66
NUBP1P53384 SRIP3-201ENST00000413200 219 ntBASIC4.67□□□□□ -1.66
NUBP1P53384 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NUBP1P53384 CST2P1-201ENST00000425770 87 ntBASIC4.67□□□□□ -1.66
NUBP1P53384 RNA5SP103-201ENST00000459503 118 ntBASIC4.67□□□□□ -1.66
NUBP1P53384 RNA5SP497-201ENST00000516081 97 ntBASIC4.67□□□□□ -1.66
NUBP1P53384 IGLV3-17-201ENST00000519099 244 ntBASIC4.67□□□□□ -1.66
NUBP1P53384 MIR3199-1-201ENST00000582434 88 ntBASIC4.67□□□□□ -1.66
NUBP1P53384 MIR548AE2-201ENST00000583456 67 ntBASIC4.67□□□□□ -1.66
NUBP1P53384 AL161756.2-201ENST00000604597 246 ntBASIC4.67□□□□□ -1.66
NUBP1P53384 AC103810.7-201ENST00000607821 91 ntBASIC4.67□□□□□ -1.66
NUBP1P53384 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
NUBP1P53384 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.67□□□□□ -1.66
NUBP1P53384 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
NUBP1P53384 AL133412.1-201ENST00000380194 2992 ntBASIC4.67□□□□□ -1.66
NUBP1P53384 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
NUBP1P53384 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.67□□□□□ -1.66
NUBP1P53384 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
NUBP1P53384 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.66□□□□□ -1.66
NUBP1P53384 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NUBP1P53384 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.66□□□□□ -1.66
NUBP1P53384 RN7SKP185-201ENST00000362813 326 ntBASIC4.66□□□□□ -1.66
NUBP1P53384 Y_RNA.94-201ENST00000363068 106 ntBASIC4.66□□□□□ -1.66
NUBP1P53384 RNA5SP261-201ENST00000410536 106 ntBASIC4.66□□□□□ -1.66
NUBP1P53384 RN7SL297P-201ENST00000483161 293 ntBASIC4.66□□□□□ -1.66
NUBP1P53384 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC4.66□□□□□ -1.66
NUBP1P53384 AL356280.1-201ENST00000603614 379 ntBASIC4.66□□□□□ -1.66
NUBP1P53384 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NUBP1P53384 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NUBP1P53384 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.66□□□□□ -1.66
NUBP1P53384 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NUBP1P53384 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NUBP1P53384 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.66□□□□□ -1.66
NUBP1P53384 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms