Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 snoU13.14-201ENST00000459372 104 ntBASIC3.65□□□□□ -1.83
USP11P51784 RAC1P5-201ENST00000512182 576 ntBASIC3.65□□□□□ -1.83
USP11P51784 RNU2-44P-201ENST00000516795 194 ntBASIC3.65□□□□□ -1.83
USP11P51784 AP001328.1-201ENST00000528550 176 ntBASIC3.65□□□□□ -1.83
USP11P51784 MIR5004-201ENST00000579078 107 ntBASIC3.65□□□□□ -1.83
USP11P51784 RPS15AP11-201ENST00000594193 385 ntBASIC3.65□□□□□ -1.83
USP11P51784 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
USP11P51784 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
USP11P51784 AC004944.1-201ENST00000517807 3059 ntBASIC3.65□□□□□ -1.83
USP11P51784 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
USP11P51784 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.64□□□□□ -1.83
USP11P51784 AL136164.4-201ENST00000625013 2135 ntBASIC3.64□□□□□ -1.83
USP11P51784 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.64□□□□□ -1.83
USP11P51784 AL353746.1-201ENST00000566293 6881 ntBASIC3.64□□□□□ -1.83
USP11P51784 U8.7-201ENST00000364940 136 ntBASIC3.64□□□□□ -1.83
USP11P51784 MIR548B-201ENST00000385247 97 ntBASIC3.64□□□□□ -1.83
USP11P51784 NDUFB4P4-201ENST00000404822 243 ntBASIC3.64□□□□□ -1.83
USP11P51784 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.64□□□□□ -1.83
USP11P51784 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.64□□□□□ -1.83
USP11P51784 HMGN1P18-201ENST00000457642 277 ntBASIC3.64□□□□□ -1.83
USP11P51784 AC127455.1-201ENST00000565496 145 ntBASIC3.64□□□□□ -1.83
USP11P51784 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.64□□□□□ -1.83
USP11P51784 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.64□□□□□ -1.83
USP11P51784 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
USP11P51784 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
USP11P51784 U3.9-201ENST00000363823 204 ntBASIC3.63□□□□□ -1.83
USP11P51784 SNORA38.1-201ENST00000364172 131 ntBASIC3.63□□□□□ -1.83
USP11P51784 EEF1B2P7-201ENST00000451177 676 ntBASIC3.63□□□□□ -1.83
USP11P51784 AC145146.1-201ENST00000496370 254 ntBASIC3.63□□□□□ -1.83
USP11P51784 RN7SKP57-201ENST00000517248 293 ntBASIC3.63□□□□□ -1.83
USP11P51784 AC104027.1-201ENST00000521887 300 ntBASIC3.63□□□□□ -1.83
USP11P51784 CYCSP26-201ENST00000534107 320 ntBASIC3.63□□□□□ -1.83
USP11P51784 MIR4724-201ENST00000579485 89 ntBASIC3.63□□□□□ -1.83
USP11P51784 AC023043.3-201ENST00000593113 385 ntBASIC3.63□□□□□ -1.83
USP11P51784 AC005000.2-201ENST00000605468 310 ntBASIC3.63□□□□□ -1.83
USP11P51784 AC025754.2-201ENST00000606491 432 ntBASIC3.63□□□□□ -1.83
USP11P51784 U7.2-201ENST00000607576 63 ntBASIC3.63□□□□□ -1.83
USP11P51784 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.63□□□□□ -1.83
USP11P51784 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
USP11P51784 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
USP11P51784 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
USP11P51784 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.62□□□□□ -1.83
USP11P51784 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
USP11P51784 RNU6-1010P-201ENST00000362757 107 ntBASIC3.62□□□□□ -1.83
USP11P51784 U3.8-201ENST00000363675 217 ntBASIC3.62□□□□□ -1.83
USP11P51784 RNU6-1082P-201ENST00000364574 107 ntBASIC3.62□□□□□ -1.83
USP11P51784 Y_RNA.294-201ENST00000364916 102 ntBASIC3.62□□□□□ -1.83
USP11P51784 Y_RNA.393-201ENST00000383936 102 ntBASIC3.62□□□□□ -1.83
USP11P51784 SNORA7.4-201ENST00000384249 137 ntBASIC3.62□□□□□ -1.83
USP11P51784 RNU6-476P-201ENST00000384726 107 ntBASIC3.62□□□□□ -1.83
USP11P51784 RNA5SP293-201ENST00000410527 113 ntBASIC3.62□□□□□ -1.83
USP11P51784 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
USP11P51784 HSPE1P13-201ENST00000451143 297 ntBASIC3.62□□□□□ -1.83
USP11P51784 CYCTP-201ENST00000504253 315 ntBASIC3.62□□□□□ -1.83
USP11P51784 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.62□□□□□ -1.83
USP11P51784 Y_RNA.712-201ENST00000517011 92 ntBASIC3.62□□□□□ -1.83
USP11P51784 AP000867.2-201ENST00000532468 320 ntBASIC3.62□□□□□ -1.83
USP11P51784 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.62□□□□□ -1.83
USP11P51784 uc_338.25-201ENST00000613756 156 ntBASIC3.62□□□□□ -1.83
USP11P51784 AC006111.3-201ENST00000622137 383 ntBASIC3.62□□□□□ -1.83
USP11P51784 MIR622-201ENST00000638396 96 ntBASIC3.62□□□□□ -1.83
USP11P51784 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.62□□□□□ -1.83
USP11P51784 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
USP11P51784 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
USP11P51784 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
USP11P51784 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
USP11P51784 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
USP11P51784 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
USP11P51784 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
USP11P51784 AC002546.1-201ENST00000588041 2504 ntBASIC3.61□□□□□ -1.83
USP11P51784 Y_RNA.43-201ENST00000362670 111 ntBASIC3.61□□□□□ -1.83
USP11P51784 RNU6-728P-201ENST00000365375 104 ntBASIC3.61□□□□□ -1.83
USP11P51784 RNU6-805P-201ENST00000365643 106 ntBASIC3.61□□□□□ -1.83
USP11P51784 RNU6-144P-201ENST00000383951 107 ntBASIC3.61□□□□□ -1.83
USP11P51784 RNU6-1144P-201ENST00000384247 104 ntBASIC3.61□□□□□ -1.83
USP11P51784 Y_RNA.521-201ENST00000384560 114 ntBASIC3.61□□□□□ -1.83
USP11P51784 RNU6-748P-201ENST00000384648 107 ntBASIC3.61□□□□□ -1.83
USP11P51784 RNU6-19P-201ENST00000384718 107 ntBASIC3.61□□□□□ -1.83
USP11P51784 MIR1278-201ENST00000408753 81 ntBASIC3.61□□□□□ -1.83
USP11P51784 RNU4-43P-201ENST00000410628 137 ntBASIC3.61□□□□□ -1.83
USP11P51784 RNA5SP38-201ENST00000410750 119 ntBASIC3.61□□□□□ -1.83
USP11P51784 AC115115.1-201ENST00000449927 248 ntBASIC3.61□□□□□ -1.83
USP11P51784 RPS27P1-201ENST00000450552 247 ntBASIC3.61□□□□□ -1.83
USP11P51784 RN7SL863P-201ENST00000462370 296 ntBASIC3.61□□□□□ -1.83
USP11P51784 AC107626.1-201ENST00000471084 183 ntBASIC3.61□□□□□ -1.83
USP11P51784 RN7SL504P-201ENST00000494496 287 ntBASIC3.61□□□□□ -1.83
USP11P51784 RNA5SP76-201ENST00000516277 87 ntBASIC3.61□□□□□ -1.83
USP11P51784 Y_RNA.709-201ENST00000516952 92 ntBASIC3.61□□□□□ -1.83
USP11P51784 AC027176.1-201ENST00000560204 514 ntBASIC3.61□□□□□ -1.83
USP11P51784 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.61□□□□□ -1.83
USP11P51784 AC093908.1-201ENST00000623125 8092 ntBASIC3.61□□□□□ -1.83
USP11P51784 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
USP11P51784 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
USP11P51784 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
USP11P51784 RNU6-915P-201ENST00000364943 103 ntBASIC3.6□□□□□ -1.83
USP11P51784 AL512604.1-201ENST00000404812 257 ntBASIC3.6□□□□□ -1.83
USP11P51784 AL158823.1-201ENST00000418441 478 ntBASIC3.6□□□□□ -1.83
USP11P51784 AL714022.1-201ENST00000439897 151 ntBASIC3.6□□□□□ -1.83
USP11P51784 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.6□□□□□ -1.83
USP11P51784 AC117454.1-201ENST00000491120 168 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms