Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 AC024581.2-201ENST00000619986 252 ntBASIC1.78□□□□□ -2.12
ATRXP46100 Y_RNA.8-201ENST00000362353 102 ntBASIC1.77□□□□□ -2.13
ATRXP46100 Y_RNA.329-201ENST00000365209 107 ntBASIC1.77□□□□□ -2.13
ATRXP46100 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
ATRXP46100 MIR1290-201ENST00000408735 78 ntBASIC1.77□□□□□ -2.13
ATRXP46100 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.77□□□□□ -2.13
ATRXP46100 AC009969.1-201ENST00000438726 172 ntBASIC1.77□□□□□ -2.13
ATRXP46100 RPEP5-201ENST00000441137 268 ntBASIC1.77□□□□□ -2.13
ATRXP46100 NDUFB1P2-201ENST00000449477 176 ntBASIC1.77□□□□□ -2.13
ATRXP46100 SNRPGP3-201ENST00000469405 227 ntBASIC1.77□□□□□ -2.13
ATRXP46100 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.77□□□□□ -2.13
ATRXP46100 RNU6-496P-201ENST00000516145 99 ntBASIC1.77□□□□□ -2.13
ATRXP46100 SNORD19.2-201ENST00000516978 73 ntBASIC1.77□□□□□ -2.13
ATRXP46100 DEFB131C-201ENST00000528817 165 ntBASIC1.77□□□□□ -2.13
ATRXP46100 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.77□□□□□ -2.13
ATRXP46100 AC005899.2-201ENST00000584353 90 ntBASIC1.77□□□□□ -2.13
ATRXP46100 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
ATRXP46100 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
ATRXP46100 SNORD50.1-201ENST00000362987 71 ntBASIC1.77□□□□□ -2.13
ATRXP46100 RNU4-56P-201ENST00000364700 142 ntBASIC1.77□□□□□ -2.13
ATRXP46100 Y_RNA.415-201ENST00000384012 112 ntBASIC1.77□□□□□ -2.13
ATRXP46100 AP000567.1-201ENST00000406413 156 ntBASIC1.77□□□□□ -2.13
ATRXP46100 AC023141.4-201ENST00000412031 328 ntBASIC1.77□□□□□ -2.13
ATRXP46100 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.77□□□□□ -2.13
ATRXP46100 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.77□□□□□ -2.13
ATRXP46100 AC007969.2-201ENST00000441891 191 ntBASIC1.77□□□□□ -2.13
ATRXP46100 OSTCP8-201ENST00000445117 448 ntBASIC1.77□□□□□ -2.13
ATRXP46100 SNORA31.6-201ENST00000516241 130 ntBASIC1.77□□□□□ -2.13
ATRXP46100 RNU7-4P-201ENST00000516961 62 ntBASIC1.77□□□□□ -2.13
ATRXP46100 AC019176.1-201ENST00000518519 225 ntBASIC1.77□□□□□ -2.13
ATRXP46100 SYF2P1-201ENST00000550658 413 ntBASIC1.77□□□□□ -2.13
ATRXP46100 AC027288.2-201ENST00000553028 243 ntBASIC1.77□□□□□ -2.13
ATRXP46100 AC060766.3-201ENST00000591442 263 ntBASIC1.77□□□□□ -2.13
ATRXP46100 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.77□□□□□ -2.13
ATRXP46100 U6.92-201ENST00000636464 89 ntBASIC1.77□□□□□ -2.13
ATRXP46100 Z75746.1-201ENST00000440243 2080 ntBASIC1.77□□□□□ -2.13
ATRXP46100 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
ATRXP46100 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
ATRXP46100 AL159152.1-201ENST00000635019 2587 ntBASIC1.76□□□□□ -2.13
ATRXP46100 Y_RNA.84-201ENST00000363011 104 ntBASIC1.76□□□□□ -2.13
ATRXP46100 SNORA14A-201ENST00000364773 135 ntBASIC1.76□□□□□ -2.13
ATRXP46100 RNU2-20P-201ENST00000410425 191 ntBASIC1.76□□□□□ -2.13
ATRXP46100 RNA5SP504-201ENST00000410676 117 ntBASIC1.76□□□□□ -2.13
ATRXP46100 EBAG9P1-201ENST00000418955 543 ntBASIC1.76□□□□□ -2.13
ATRXP46100 TRIAP1P1-201ENST00000427062 225 ntBASIC1.76□□□□□ -2.13
ATRXP46100 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.76□□□□□ -2.13
ATRXP46100 RNU6-250P-201ENST00000516958 103 ntBASIC1.76□□□□□ -2.13
ATRXP46100 RNU6-988P-201ENST00000519081 107 ntBASIC1.76□□□□□ -2.13
ATRXP46100 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC1.76□□□□□ -2.13
ATRXP46100 AC023157.2-201ENST00000540596 141 ntBASIC1.76□□□□□ -2.13
ATRXP46100 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.76□□□□□ -2.13
ATRXP46100 MIR4644-201ENST00000579929 84 ntBASIC1.76□□□□□ -2.13
ATRXP46100 AC099778.2-201ENST00000610904 211 ntBASIC1.76□□□□□ -2.13
ATRXP46100 AL157834.3-201ENST00000615543 103 ntBASIC1.76□□□□□ -2.13
ATRXP46100 U6.98-201ENST00000637157 84 ntBASIC1.76□□□□□ -2.13
ATRXP46100 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.76□□□□□ -2.13
ATRXP46100 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
ATRXP46100 AP000560.1-201ENST00000624150 1937 ntBASIC1.76□□□□□ -2.13
ATRXP46100 RNU6-245P-201ENST00000384020 107 ntBASIC1.76□□□□□ -2.13
ATRXP46100 RNU6-463P-201ENST00000384340 107 ntBASIC1.76□□□□□ -2.13
ATRXP46100 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.76□□□□□ -2.13
ATRXP46100 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.76□□□□□ -2.13
ATRXP46100 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.76□□□□□ -2.13
ATRXP46100 MTND1P19-201ENST00000511780 315 ntBASIC1.76□□□□□ -2.13
ATRXP46100 RNU6-966P-201ENST00000516479 104 ntBASIC1.76□□□□□ -2.13
ATRXP46100 RN7SKP49-201ENST00000516675 260 ntBASIC1.76□□□□□ -2.13
ATRXP46100 RNU6-1198P-201ENST00000516904 67 ntBASIC1.76□□□□□ -2.13
ATRXP46100 RNU6-703P-201ENST00000516946 107 ntBASIC1.76□□□□□ -2.13
ATRXP46100 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC1.76□□□□□ -2.13
ATRXP46100 MIR4503-201ENST00000582187 83 ntBASIC1.76□□□□□ -2.13
ATRXP46100 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.76□□□□□ -2.13
ATRXP46100 AL357075.2-201ENST00000614906 189 ntBASIC1.76□□□□□ -2.13
ATRXP46100 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.76□□□□□ -2.13
ATRXP46100 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.75□□□□□ -2.13
ATRXP46100 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
ATRXP46100 RNU1-72P-201ENST00000362976 153 ntBASIC1.75□□□□□ -2.13
ATRXP46100 Y_RNA.106-201ENST00000363189 100 ntBASIC1.75□□□□□ -2.13
ATRXP46100 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.75□□□□□ -2.13
ATRXP46100 AL159169.1-201ENST00000421119 127 ntBASIC1.75□□□□□ -2.13
ATRXP46100 snoU13.30-201ENST00000458951 104 ntBASIC1.75□□□□□ -2.13
ATRXP46100 MIR3128-201ENST00000581957 66 ntBASIC1.75□□□□□ -2.13
ATRXP46100 AL138963.2-201ENST00000605137 226 ntBASIC1.75□□□□□ -2.13
ATRXP46100 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.75□□□□□ -2.13
ATRXP46100 Xist_exon1.1-201ENST00000618930 85 ntBASIC1.75□□□□□ -2.13
ATRXP46100 Y_RNA.26-201ENST00000362539 101 ntBASIC1.75□□□□□ -2.13
ATRXP46100 RNU6-1141P-201ENST00000364520 107 ntBASIC1.75□□□□□ -2.13
ATRXP46100 RNU6-1280P-201ENST00000365211 107 ntBASIC1.75□□□□□ -2.13
ATRXP46100 Y_RNA.489-201ENST00000384410 101 ntBASIC1.75□□□□□ -2.13
ATRXP46100 SNORA48.3-201ENST00000391081 134 ntBASIC1.75□□□□□ -2.13
ATRXP46100 MTCYBP2-201ENST00000407745 171 ntBASIC1.75□□□□□ -2.13
ATRXP46100 MIR1183-201ENST00000408856 89 ntBASIC1.75□□□□□ -2.13
ATRXP46100 RNU2-23P-201ENST00000410545 195 ntBASIC1.75□□□□□ -2.13
ATRXP46100 RNA5SP127-201ENST00000411051 133 ntBASIC1.75□□□□□ -2.13
ATRXP46100 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.75□□□□□ -2.13
ATRXP46100 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.75□□□□□ -2.13
ATRXP46100 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
ATRXP46100 Y_RNA.713-201ENST00000517013 96 ntBASIC1.75□□□□□ -2.13
ATRXP46100 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
ATRXP46100 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.75□□□□□ -2.13
ATRXP46100 AC005357.1-201ENST00000588399 301 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms