Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.32□□□□□ -2.04
RFC1P35251 AC104435.1-201ENST00000483483 166 ntBASIC2.32□□□□□ -2.04
RFC1P35251 AC067942.3-201ENST00000512025 362 ntBASIC2.32□□□□□ -2.04
RFC1P35251 Y_RNA.683-201ENST00000516508 93 ntBASIC2.32□□□□□ -2.04
RFC1P35251 RNU6-344P-201ENST00000516635 111 ntBASIC2.32□□□□□ -2.04
RFC1P35251 AC131281.1-201ENST00000522984 164 ntBASIC2.32□□□□□ -2.04
RFC1P35251 AC022616.8-201ENST00000533569 253 ntBASIC2.32□□□□□ -2.04
RFC1P35251 RRN3P3-201ENST00000549207 578 ntBASIC2.32□□□□□ -2.04
RFC1P35251 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.32□□□□□ -2.04
RFC1P35251 MIR4659A-201ENST00000580269 81 ntBASIC2.32□□□□□ -2.04
RFC1P35251 AC078899.2-201ENST00000595282 212 ntBASIC2.32□□□□□ -2.04
RFC1P35251 AL390123.1-201ENST00000603216 237 ntBASIC2.32□□□□□ -2.04
RFC1P35251 AL121655.1-201ENST00000605811 308 ntBASIC2.32□□□□□ -2.04
RFC1P35251 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
RFC1P35251 ZNF720P1-201ENST00000562403 1939 ntBASIC2.32□□□□□ -2.04
RFC1P35251 AP006437.1-201ENST00000641440 3685 ntBASIC2.32□□□□□ -2.04
RFC1P35251 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.31□□□□□ -2.04
RFC1P35251 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RFC1P35251 MIRLET7G-201ENST00000362280 84 ntBASIC2.31□□□□□ -2.04
RFC1P35251 Y_RNA.415-201ENST00000384012 112 ntBASIC2.31□□□□□ -2.04
RFC1P35251 Y_RNA.526-201ENST00000384572 110 ntBASIC2.31□□□□□ -2.04
RFC1P35251 RNU6-1105P-201ENST00000384774 107 ntBASIC2.31□□□□□ -2.04
RFC1P35251 SNORD78.2-201ENST00000391076 69 ntBASIC2.31□□□□□ -2.04
RFC1P35251 ELOCP21-201ENST00000412558 336 ntBASIC2.31□□□□□ -2.04
RFC1P35251 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.31□□□□□ -2.04
RFC1P35251 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.31□□□□□ -2.04
RFC1P35251 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.31□□□□□ -2.04
RFC1P35251 AC073910.1-201ENST00000445047 438 ntBASIC2.31□□□□□ -2.04
RFC1P35251 AC007395.1-201ENST00000451333 677 ntBASIC2.31□□□□□ -2.04
RFC1P35251 RPS23P5-201ENST00000495419 428 ntBASIC2.31□□□□□ -2.04
RFC1P35251 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.31□□□□□ -2.04
RFC1P35251 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.31□□□□□ -2.04
RFC1P35251 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.31□□□□□ -2.04
RFC1P35251 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.31□□□□□ -2.04
RFC1P35251 AL117187.1-201ENST00000555482 181 ntBASIC2.31□□□□□ -2.04
RFC1P35251 AL355297.3-201ENST00000604082 446 ntBASIC2.31□□□□□ -2.04
RFC1P35251 RPL17P51-201ENST00000605218 238 ntBASIC2.31□□□□□ -2.04
RFC1P35251 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.31□□□□□ -2.04
RFC1P35251 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.3□□□□□ -2.04
RFC1P35251 Y_RNA.26-201ENST00000362539 101 ntBASIC2.3□□□□□ -2.04
RFC1P35251 RNU6-961P-201ENST00000363893 105 ntBASIC2.3□□□□□ -2.04
RFC1P35251 Y_RNA.210-201ENST00000364161 110 ntBASIC2.3□□□□□ -2.04
RFC1P35251 Y_RNA.214-201ENST00000364201 112 ntBASIC2.3□□□□□ -2.04
RFC1P35251 SNORD87-201ENST00000364849 89 ntBASIC2.3□□□□□ -2.04
RFC1P35251 SNORA63.7-201ENST00000365579 123 ntBASIC2.3□□□□□ -2.04
RFC1P35251 RPL21P1-201ENST00000399532 476 ntBASIC2.3□□□□□ -2.04
RFC1P35251 AL079342.1-201ENST00000401460 267 ntBASIC2.3□□□□□ -2.04
RFC1P35251 AL033519.2-201ENST00000403958 392 ntBASIC2.3□□□□□ -2.04
RFC1P35251 MRPL35P1-201ENST00000404272 572 ntBASIC2.3□□□□□ -2.04
RFC1P35251 MIR320B2-201ENST00000408479 138 ntBASIC2.3□□□□□ -2.04
RFC1P35251 ELOCP20-201ENST00000422460 345 ntBASIC2.3□□□□□ -2.04
RFC1P35251 DPH3P2-201ENST00000422618 250 ntBASIC2.3□□□□□ -2.04
RFC1P35251 PCNPP5-201ENST00000452246 481 ntBASIC2.3□□□□□ -2.04
RFC1P35251 SNORA40.9-201ENST00000515895 93 ntBASIC2.3□□□□□ -2.04
RFC1P35251 RNU6-397P-201ENST00000516226 104 ntBASIC2.3□□□□□ -2.04
RFC1P35251 RNU5F-4P-201ENST00000516581 114 ntBASIC2.3□□□□□ -2.04
RFC1P35251 RNU6-897P-201ENST00000517135 105 ntBASIC2.3□□□□□ -2.04
RFC1P35251 SNORA31.25-201ENST00000517242 134 ntBASIC2.3□□□□□ -2.04
RFC1P35251 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.3□□□□□ -2.04
RFC1P35251 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.3□□□□□ -2.04
RFC1P35251 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.3□□□□□ -2.04
RFC1P35251 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.3□□□□□ -2.04
RFC1P35251 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.3□□□□□ -2.04
RFC1P35251 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
RFC1P35251 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
RFC1P35251 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
RFC1P35251 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RFC1P35251 RNU6-545P-201ENST00000362681 104 ntBASIC2.29□□□□□ -2.04
RFC1P35251 Y_RNA.105-201ENST00000363182 111 ntBASIC2.29□□□□□ -2.04
RFC1P35251 RNU6-806P-201ENST00000365147 105 ntBASIC2.29□□□□□ -2.04
RFC1P35251 MIR568-201ENST00000385036 95 ntBASIC2.29□□□□□ -2.04
RFC1P35251 Y_RNA.595-201ENST00000410403 105 ntBASIC2.29□□□□□ -2.04
RFC1P35251 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.29□□□□□ -2.04
RFC1P35251 RNU7-14P-201ENST00000459331 62 ntBASIC2.29□□□□□ -2.04
RFC1P35251 MRPS35P2-201ENST00000508242 191 ntBASIC2.29□□□□□ -2.04
RFC1P35251 RNA5SP200-201ENST00000516360 103 ntBASIC2.29□□□□□ -2.04
RFC1P35251 RNA5SP137-201ENST00000516833 135 ntBASIC2.29□□□□□ -2.04
RFC1P35251 MIR4529-201ENST00000578110 78 ntBASIC2.29□□□□□ -2.04
RFC1P35251 AC007229.1-201ENST00000590455 412 ntBASIC2.29□□□□□ -2.04
RFC1P35251 AL162730.1-201ENST00000605734 292 ntBASIC2.29□□□□□ -2.04
RFC1P35251 SNORD11B-201ENST00000607707 90 ntBASIC2.29□□□□□ -2.04
RFC1P35251 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
RFC1P35251 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RFC1P35251 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RFC1P35251 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RFC1P35251 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
RFC1P35251 RNU6-1309P-201ENST00000363305 108 ntBASIC2.28□□□□□ -2.04
RFC1P35251 RNU5F-3P-201ENST00000363767 117 ntBASIC2.28□□□□□ -2.04
RFC1P35251 SNORA25B-201ENST00000365507 128 ntBASIC2.28□□□□□ -2.04
RFC1P35251 RNU6-611P-201ENST00000384276 104 ntBASIC2.28□□□□□ -2.04
RFC1P35251 RNU6-121P-201ENST00000410525 99 ntBASIC2.28□□□□□ -2.04
RFC1P35251 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.28□□□□□ -2.04
RFC1P35251 HMGN2P18-201ENST00000450680 270 ntBASIC2.28□□□□□ -2.04
RFC1P35251 RNU1-117P-201ENST00000517041 158 ntBASIC2.28□□□□□ -2.04
RFC1P35251 AP002001.1-203ENST00000534002 267 ntBASIC2.28□□□□□ -2.04
RFC1P35251 AC233702.2-202ENST00000562547 291 ntBASIC2.28□□□□□ -2.04
RFC1P35251 AC055872.1-201ENST00000570978 278 ntBASIC2.28□□□□□ -2.04
RFC1P35251 MIR5002-201ENST00000584713 97 ntBASIC2.28□□□□□ -2.04
RFC1P35251 MIR6840-201ENST00000611937 71 ntBASIC2.28□□□□□ -2.04
RFC1P35251 AC008873.1-201ENST00000625051 138 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms