Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RNA5SP490-201ENST00000517141 136 ntBASIC3.07□□□□□ -1.92
HOXC12P31275 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.07□□□□□ -1.92
HOXC12P31275 AC027419.1-201ENST00000522976 328 ntBASIC3.07□□□□□ -1.92
HOXC12P31275 AC025754.2-201ENST00000606491 432 ntBASIC3.07□□□□□ -1.92
HOXC12P31275 RMST_8.1-201ENST00000610287 165 ntBASIC3.07□□□□□ -1.92
HOXC12P31275 AC013412.1-201ENST00000610687 192 ntBASIC3.07□□□□□ -1.92
HOXC12P31275 AC013791.1-201ENST00000616619 62 ntBASIC3.07□□□□□ -1.92
HOXC12P31275 U6.106-201ENST00000636360 105 ntBASIC3.07□□□□□ -1.92
HOXC12P31275 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HOXC12P31275 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXC12P31275 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.07□□□□□ -1.92
HOXC12P31275 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HOXC12P31275 Y_RNA.124-201ENST00000363339 93 ntBASIC3.06□□□□□ -1.92
HOXC12P31275 RNU1-23P-201ENST00000363361 144 ntBASIC3.06□□□□□ -1.92
HOXC12P31275 U8.9-201ENST00000365667 134 ntBASIC3.06□□□□□ -1.92
HOXC12P31275 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HOXC12P31275 SNORA72.4-201ENST00000384174 132 ntBASIC3.06□□□□□ -1.92
HOXC12P31275 MIR184-201ENST00000384962 84 ntBASIC3.06□□□□□ -1.92
HOXC12P31275 MIR95-201ENST00000385072 81 ntBASIC3.06□□□□□ -1.92
HOXC12P31275 SNORA26.7-201ENST00000391288 122 ntBASIC3.06□□□□□ -1.92
HOXC12P31275 RNU2-63P-201ENST00000410792 194 ntBASIC3.06□□□□□ -1.92
HOXC12P31275 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.06□□□□□ -1.92
HOXC12P31275 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.06□□□□□ -1.92
HOXC12P31275 AC016925.1-201ENST00000458303 298 ntBASIC3.06□□□□□ -1.92
HOXC12P31275 SNORD65B-201ENST00000459126 73 ntBASIC3.06□□□□□ -1.92
HOXC12P31275 FCF1P8-201ENST00000510322 597 ntBASIC3.06□□□□□ -1.92
HOXC12P31275 AL355297.2-201ENST00000604792 129 ntBASIC3.06□□□□□ -1.92
HOXC12P31275 MIR7112-201ENST00000616126 65 ntBASIC3.06□□□□□ -1.92
HOXC12P31275 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.06□□□□□ -1.92
HOXC12P31275 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXC12P31275 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
HOXC12P31275 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HOXC12P31275 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
HOXC12P31275 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HOXC12P31275 RNU6-774P-201ENST00000363238 107 ntBASIC3.05□□□□□ -1.92
HOXC12P31275 Y_RNA.293-201ENST00000364908 93 ntBASIC3.05□□□□□ -1.92
HOXC12P31275 Y_RNA.310-201ENST00000365063 113 ntBASIC3.05□□□□□ -1.92
HOXC12P31275 MIR627-201ENST00000384979 97 ntBASIC3.05□□□□□ -1.92
HOXC12P31275 MIR873-201ENST00000401120 77 ntBASIC3.05□□□□□ -1.92
HOXC12P31275 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXC12P31275 RPS29P31-201ENST00000446147 164 ntBASIC3.05□□□□□ -1.92
HOXC12P31275 RPS4XP2-201ENST00000458402 793 ntBASIC3.05□□□□□ -1.92
HOXC12P31275 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXC12P31275 SNORA70.19-201ENST00000516717 90 ntBASIC3.05□□□□□ -1.92
HOXC12P31275 MIR4325-201ENST00000583049 90 ntBASIC3.05□□□□□ -1.92
HOXC12P31275 MIR4506-201ENST00000584693 77 ntBASIC3.05□□□□□ -1.92
HOXC12P31275 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
HOXC12P31275 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
HOXC12P31275 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
HOXC12P31275 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HOXC12P31275 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXC12P31275 RNU6-899P-201ENST00000363947 107 ntBASIC3.04□□□□□ -1.92
HOXC12P31275 Y_RNA.240-201ENST00000364469 95 ntBASIC3.04□□□□□ -1.92
HOXC12P31275 AP002088.1-201ENST00000382740 395 ntBASIC3.04□□□□□ -1.92
HOXC12P31275 Y_RNA.435-201ENST00000384095 112 ntBASIC3.04□□□□□ -1.92
HOXC12P31275 RNU6-220P-201ENST00000390919 107 ntBASIC3.04□□□□□ -1.92
HOXC12P31275 RPS20P10-201ENST00000451209 253 ntBASIC3.04□□□□□ -1.92
HOXC12P31275 AC025518.1-201ENST00000479856 347 ntBASIC3.04□□□□□ -1.92
HOXC12P31275 AC010598.1-201ENST00000510378 103 ntBASIC3.04□□□□□ -1.92
HOXC12P31275 RNU6-1219P-201ENST00000516143 112 ntBASIC3.04□□□□□ -1.92
HOXC12P31275 MRPS18CP4-201ENST00000535821 231 ntBASIC3.04□□□□□ -1.92
HOXC12P31275 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXC12P31275 EIF4BP1-201ENST00000554881 351 ntBASIC3.04□□□□□ -1.92
HOXC12P31275 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXC12P31275 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXC12P31275 AL356280.1-201ENST00000603614 379 ntBASIC3.04□□□□□ -1.92
HOXC12P31275 RNVU1-4-201ENST00000612985 164 ntBASIC3.04□□□□□ -1.92
HOXC12P31275 AL513302.2-201ENST00000562313 1842 ntBASIC3.04□□□□□ -1.92
HOXC12P31275 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.04□□□□□ -1.92
HOXC12P31275 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HOXC12P31275 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HOXC12P31275 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
HOXC12P31275 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXC12P31275 Y_RNA.7-201ENST00000362352 102 ntBASIC3.03□□□□□ -1.92
HOXC12P31275 RNU4-35P-201ENST00000362588 141 ntBASIC3.03□□□□□ -1.92
HOXC12P31275 Y_RNA.172-201ENST00000363765 102 ntBASIC3.03□□□□□ -1.92
HOXC12P31275 RNU6-407P-201ENST00000365280 104 ntBASIC3.03□□□□□ -1.92
HOXC12P31275 Y_RNA.571-201ENST00000384753 98 ntBASIC3.03□□□□□ -1.92
HOXC12P31275 MIR887-201ENST00000401258 79 ntBASIC3.03□□□□□ -1.92
HOXC12P31275 HSPE1P21-201ENST00000438283 308 ntBASIC3.03□□□□□ -1.92
HOXC12P31275 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXC12P31275 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXC12P31275 AL357552.1-201ENST00000445254 415 ntBASIC3.03□□□□□ -1.92
HOXC12P31275 RPL23AP7-203ENST00000449021 469 ntBASIC3.03□□□□□ -1.92
HOXC12P31275 RNU7-141P-201ENST00000459304 62 ntBASIC3.03□□□□□ -1.92
HOXC12P31275 CENPBD1P1-201ENST00000464061 469 ntBASIC3.03□□□□□ -1.92
HOXC12P31275 RNU6-1278P-201ENST00000516130 107 ntBASIC3.03□□□□□ -1.92
HOXC12P31275 RNU6-255P-201ENST00000516957 105 ntBASIC3.03□□□□□ -1.92
HOXC12P31275 AC107934.2-201ENST00000518653 310 ntBASIC3.03□□□□□ -1.92
HOXC12P31275 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXC12P31275 AC007536.1-201ENST00000533382 349 ntBASIC3.03□□□□□ -1.92
HOXC12P31275 PRELID2P1-201ENST00000552837 301 ntBASIC3.03□□□□□ -1.92
HOXC12P31275 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXC12P31275 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
HOXC12P31275 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXC12P31275 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.93
HOXC12P31275 SNORD114-7-201ENST00000362520 77 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 SNORA27.1-201ENST00000362604 124 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 RNU6-271P-201ENST00000363858 105 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 RNA5SP42-201ENST00000364278 115 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms