Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC017083.1-201ENST00000428093 483 ntBASIC4.04□□□□□ -1.76
VARSP26640 RPL23AP46-201ENST00000438548 490 ntBASIC4.04□□□□□ -1.76
VARSP26640 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.04□□□□□ -1.76
VARSP26640 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
VARSP26640 AC093663.1-201ENST00000497190 394 ntBASIC4.04□□□□□ -1.76
VARSP26640 RNU6-948P-201ENST00000516374 107 ntBASIC4.04□□□□□ -1.76
VARSP26640 RNU6-1149P-201ENST00000516810 97 ntBASIC4.04□□□□□ -1.76
VARSP26640 AP000867.2-201ENST00000532468 320 ntBASIC4.04□□□□□ -1.76
VARSP26640 MIR4429-201ENST00000580105 73 ntBASIC4.04□□□□□ -1.76
VARSP26640 AC008739.3-201ENST00000603262 127 ntBASIC4.04□□□□□ -1.76
VARSP26640 AC013412.1-201ENST00000610687 192 ntBASIC4.04□□□□□ -1.76
VARSP26640 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.04□□□□□ -1.76
VARSP26640 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.04□□□□□ -1.76
VARSP26640 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VARSP26640 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VARSP26640 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
VARSP26640 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VARSP26640 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VARSP26640 RNU6-1292P-201ENST00000383856 107 ntBASIC4.03□□□□□ -1.76
VARSP26640 RNU6-418P-201ENST00000384035 107 ntBASIC4.03□□□□□ -1.76
VARSP26640 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC4.03□□□□□ -1.76
VARSP26640 AC011406.1-201ENST00000512440 370 ntBASIC4.03□□□□□ -1.76
VARSP26640 AC109329.2-201ENST00000519658 482 ntBASIC4.03□□□□□ -1.76
VARSP26640 MIR3944-201ENST00000581277 108 ntBASIC4.03□□□□□ -1.76
VARSP26640 AC244505.7-201ENST00000599675 272 ntBASIC4.03□□□□□ -1.76
VARSP26640 MIR486-1-201ENST00000612171 68 ntBASIC4.03□□□□□ -1.76
VARSP26640 U6.73-201ENST00000619194 103 ntBASIC4.03□□□□□ -1.76
VARSP26640 AC093908.1-201ENST00000623125 8092 ntBASIC4.03□□□□□ -1.76
VARSP26640 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.03□□□□□ -1.76
VARSP26640 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
VARSP26640 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VARSP26640 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.02□□□□□ -1.77
VARSP26640 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VARSP26640 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.02□□□□□ -1.77
VARSP26640 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VARSP26640 PTMAP2-201ENST00000397627 327 ntBASIC4.02□□□□□ -1.77
VARSP26640 AL159169.1-201ENST00000421119 127 ntBASIC4.02□□□□□ -1.77
VARSP26640 EIF4EP4-201ENST00000424916 578 ntBASIC4.02□□□□□ -1.77
VARSP26640 U3.44-201ENST00000458938 192 ntBASIC4.02□□□□□ -1.77
VARSP26640 Y_RNA.685-201ENST00000516532 108 ntBASIC4.02□□□□□ -1.77
VARSP26640 RNU6-1270P-201ENST00000517128 108 ntBASIC4.02□□□□□ -1.77
VARSP26640 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.02□□□□□ -1.77
VARSP26640 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.02□□□□□ -1.77
VARSP26640 MIR3158-1-201ENST00000583596 81 ntBASIC4.02□□□□□ -1.77
VARSP26640 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VARSP26640 UBE3AP2-201ENST00000429033 2259 ntBASIC4.02□□□□□ -1.77
VARSP26640 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
VARSP26640 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.01□□□□□ -1.77
VARSP26640 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.01□□□□□ -1.77
VARSP26640 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.01□□□□□ -1.77
VARSP26640 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
VARSP26640 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
VARSP26640 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VARSP26640 RNU1-22P-201ENST00000363334 158 ntBASIC4.01□□□□□ -1.77
VARSP26640 RNU6-1240P-201ENST00000365155 104 ntBASIC4.01□□□□□ -1.77
VARSP26640 RNU6-234P-201ENST00000365229 104 ntBASIC4.01□□□□□ -1.77
VARSP26640 RNU6-820P-201ENST00000384273 107 ntBASIC4.01□□□□□ -1.77
VARSP26640 MIR200C-201ENST00000384980 68 ntBASIC4.01□□□□□ -1.77
VARSP26640 MIR450A2-201ENST00000385022 100 ntBASIC4.01□□□□□ -1.77
VARSP26640 RNU6ATAC-201ENST00000408749 126 ntBASIC4.01□□□□□ -1.77
VARSP26640 SNORA3C-201ENST00000408792 125 ntBASIC4.01□□□□□ -1.77
VARSP26640 SNORA19.1-201ENST00000410656 129 ntBASIC4.01□□□□□ -1.77
VARSP26640 AC008134.1-201ENST00000420943 193 ntBASIC4.01□□□□□ -1.77
VARSP26640 AC097463.2-201ENST00000421074 142 ntBASIC4.01□□□□□ -1.77
VARSP26640 Z98742.2-201ENST00000431564 187 ntBASIC4.01□□□□□ -1.77
VARSP26640 RNU7-172P-201ENST00000517125 64 ntBASIC4.01□□□□□ -1.77
VARSP26640 AC023632.4-201ENST00000517783 191 ntBASIC4.01□□□□□ -1.77
VARSP26640 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.01□□□□□ -1.77
VARSP26640 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC4.01□□□□□ -1.77
VARSP26640 uc_338.14-201ENST00000613162 166 ntBASIC4.01□□□□□ -1.77
VARSP26640 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VARSP26640 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VARSP26640 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VARSP26640 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
VARSP26640 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.01□□□□□ -1.77
VARSP26640 AC091152.2-201ENST00000591628 2569 ntBASIC4.01□□□□□ -1.77
VARSP26640 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
VARSP26640 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4□□□□□ -1.77
VARSP26640 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
VARSP26640 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4□□□□□ -1.77
VARSP26640 RNY4P6-201ENST00000363667 96 ntBASIC4□□□□□ -1.77
VARSP26640 SNORD31B-201ENST00000364977 69 ntBASIC4□□□□□ -1.77
VARSP26640 Y_RNA.362-201ENST00000365518 110 ntBASIC4□□□□□ -1.77
VARSP26640 SNORD61-201ENST00000384252 73 ntBASIC4□□□□□ -1.77
VARSP26640 AL117342.1-201ENST00000404861 406 ntBASIC4□□□□□ -1.77
VARSP26640 RNU6-1077P-201ENST00000410506 102 ntBASIC4□□□□□ -1.77
VARSP26640 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4□□□□□ -1.77
VARSP26640 AC016909.1-201ENST00000415916 166 ntBASIC4□□□□□ -1.77
VARSP26640 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4□□□□□ -1.77
VARSP26640 RPS29P21-201ENST00000496272 170 ntBASIC4□□□□□ -1.77
VARSP26640 AC097462.1-201ENST00000514125 324 ntBASIC4□□□□□ -1.77
VARSP26640 AC099522.1-202ENST00000514718 367 ntBASIC4□□□□□ -1.77
VARSP26640 SNORA67.7-201ENST00000516664 135 ntBASIC4□□□□□ -1.77
VARSP26640 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4□□□□□ -1.77
VARSP26640 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4□□□□□ -1.77
VARSP26640 MIR5009-201ENST00000578736 100 ntBASIC4□□□□□ -1.77
VARSP26640 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC4□□□□□ -1.77
VARSP26640 MIR4438-201ENST00000585271 93 ntBASIC4□□□□□ -1.77
VARSP26640 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4□□□□□ -1.77
VARSP26640 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 184.3 ms