Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 EBAG9P1-201ENST00000418955 543 ntBASIC3.91□□□□□ -1.78
RFX1P22670 AL606753.1-201ENST00000427435 87 ntBASIC3.91□□□□□ -1.78
RFX1P22670 SNORD105B-201ENST00000458770 79 ntBASIC3.91□□□□□ -1.78
RFX1P22670 CKS1BP2-201ENST00000497342 240 ntBASIC3.91□□□□□ -1.78
RFX1P22670 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.91□□□□□ -1.78
RFX1P22670 AC093259.1-201ENST00000509755 300 ntBASIC3.91□□□□□ -1.78
RFX1P22670 RNU6-1337P-201ENST00000516525 95 ntBASIC3.91□□□□□ -1.78
RFX1P22670 RNU6-965P-201ENST00000516721 96 ntBASIC3.91□□□□□ -1.78
RFX1P22670 RNA5SP490-201ENST00000517141 136 ntBASIC3.91□□□□□ -1.78
RFX1P22670 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RFX1P22670 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.91□□□□□ -1.78
RFX1P22670 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RFX1P22670 AL355596.1-201ENST00000565399 3996 ntBASIC3.9□□□□□ -1.78
RFX1P22670 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.9□□□□□ -1.78
RFX1P22670 MFSD8-233ENST00000641482 4860 ntBASIC3.9□□□□□ -1.78
RFX1P22670 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RFX1P22670 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
RFX1P22670 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
RFX1P22670 U8.7-201ENST00000364940 136 ntBASIC3.9□□□□□ -1.79
RFX1P22670 SNORD113-1-201ENST00000365321 69 ntBASIC3.9□□□□□ -1.79
RFX1P22670 RNU6-449P-201ENST00000383914 107 ntBASIC3.9□□□□□ -1.79
RFX1P22670 RNU6-1323P-201ENST00000384025 107 ntBASIC3.9□□□□□ -1.79
RFX1P22670 RNU6-418P-201ENST00000384035 107 ntBASIC3.9□□□□□ -1.79
RFX1P22670 DBIP2-201ENST00000419076 262 ntBASIC3.9□□□□□ -1.79
RFX1P22670 CR769767.1-201ENST00000436337 346 ntBASIC3.9□□□□□ -1.79
RFX1P22670 HSPE1P21-201ENST00000438283 308 ntBASIC3.9□□□□□ -1.79
RFX1P22670 AL357134.1-201ENST00000445848 426 ntBASIC3.9□□□□□ -1.79
RFX1P22670 AL137159.1-201ENST00000452808 512 ntBASIC3.9□□□□□ -1.79
RFX1P22670 AC006539.3-201ENST00000454258 129 ntBASIC3.9□□□□□ -1.79
RFX1P22670 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.9□□□□□ -1.79
RFX1P22670 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.9□□□□□ -1.79
RFX1P22670 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.9□□□□□ -1.79
RFX1P22670 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.9□□□□□ -1.79
RFX1P22670 AC244505.7-201ENST00000599675 272 ntBASIC3.9□□□□□ -1.79
RFX1P22670 RNVU1-4-201ENST00000612985 164 ntBASIC3.9□□□□□ -1.79
RFX1P22670 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.9□□□□□ -1.79
RFX1P22670 AP003355.3-201ENST00000623465 114 ntBASIC3.9□□□□□ -1.79
RFX1P22670 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.9□□□□□ -1.79
RFX1P22670 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RFX1P22670 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.89□□□□□ -1.79
RFX1P22670 RNU6-1240P-201ENST00000365155 104 ntBASIC3.89□□□□□ -1.79
RFX1P22670 Y_RNA.332-201ENST00000365271 113 ntBASIC3.89□□□□□ -1.79
RFX1P22670 MIR128-1-201ENST00000384921 82 ntBASIC3.89□□□□□ -1.79
RFX1P22670 BMS1P22-201ENST00000414726 313 ntBASIC3.89□□□□□ -1.79
RFX1P22670 MTCO1P44-201ENST00000441935 243 ntBASIC3.89□□□□□ -1.79
RFX1P22670 RN7SL594P-201ENST00000470590 287 ntBASIC3.89□□□□□ -1.79
RFX1P22670 SCARNA8-201ENST00000515924 131 ntBASIC3.89□□□□□ -1.79
RFX1P22670 RNU2-27P-201ENST00000516185 142 ntBASIC3.89□□□□□ -1.79
RFX1P22670 RNU7-115P-201ENST00000516433 55 ntBASIC3.89□□□□□ -1.79
RFX1P22670 AP001485.1-201ENST00000604799 199 ntBASIC3.89□□□□□ -1.79
RFX1P22670 AC068647.2-201ENST00000637380 353 ntBASIC3.89□□□□□ -1.79
RFX1P22670 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
RFX1P22670 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.89□□□□□ -1.79
RFX1P22670 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
RFX1P22670 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RFX1P22670 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RFX1P22670 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RFX1P22670 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RFX1P22670 RNA5SP51-201ENST00000364750 119 ntBASIC3.88□□□□□ -1.79
RFX1P22670 RNU6-969P-201ENST00000383900 105 ntBASIC3.88□□□□□ -1.79
RFX1P22670 MIR561-201ENST00000385216 97 ntBASIC3.88□□□□□ -1.79
RFX1P22670 MIR616-201ENST00000385293 97 ntBASIC3.88□□□□□ -1.79
RFX1P22670 SNORA48.2-201ENST00000390926 124 ntBASIC3.88□□□□□ -1.79
RFX1P22670 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.88□□□□□ -1.79
RFX1P22670 RNU2-48P-201ENST00000410694 191 ntBASIC3.88□□□□□ -1.79
RFX1P22670 ATP5A1P2-201ENST00000412323 255 ntBASIC3.88□□□□□ -1.79
RFX1P22670 AC123900.1-201ENST00000420390 96 ntBASIC3.88□□□□□ -1.79
RFX1P22670 AC003685.2-201ENST00000422795 395 ntBASIC3.88□□□□□ -1.79
RFX1P22670 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.88□□□□□ -1.79
RFX1P22670 ARF4P2-201ENST00000430209 526 ntBASIC3.88□□□□□ -1.79
RFX1P22670 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.88□□□□□ -1.79
RFX1P22670 AC117454.1-201ENST00000491120 168 ntBASIC3.88□□□□□ -1.79
RFX1P22670 RNA5SP20-201ENST00000515976 84 ntBASIC3.88□□□□□ -1.79
RFX1P22670 RNU7-116P-201ENST00000516940 62 ntBASIC3.88□□□□□ -1.79
RFX1P22670 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.88□□□□□ -1.79
RFX1P22670 MIR4513-201ENST00000581077 86 ntBASIC3.88□□□□□ -1.79
RFX1P22670 AP003357.1-201ENST00000604497 148 ntBASIC3.88□□□□□ -1.79
RFX1P22670 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RFX1P22670 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFX1P22670 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.87□□□□□ -1.79
RFX1P22670 SNORD116-13-201ENST00000384408 92 ntBASIC3.87□□□□□ -1.79
RFX1P22670 MIR518C-201ENST00000384822 101 ntBASIC3.87□□□□□ -1.79
RFX1P22670 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RFX1P22670 MIR548I2-201ENST00000408348 149 ntBASIC3.87□□□□□ -1.79
RFX1P22670 AL049830.2-201ENST00000480072 201 ntBASIC3.87□□□□□ -1.79
RFX1P22670 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.87□□□□□ -1.79
RFX1P22670 RNU6-453P-201ENST00000516819 85 ntBASIC3.87□□□□□ -1.79
RFX1P22670 MIR4431-201ENST00000579990 94 ntBASIC3.87□□□□□ -1.79
RFX1P22670 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.87□□□□□ -1.79
RFX1P22670 AL391903.3-201ENST00000612158 163 ntBASIC3.87□□□□□ -1.79
RFX1P22670 MIR548AY-201ENST00000617669 107 ntBASIC3.87□□□□□ -1.79
RFX1P22670 AC068647.1-201ENST00000489539 2265 ntBASIC3.87□□□□□ -1.79
RFX1P22670 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
RFX1P22670 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.86□□□□□ -1.79
RFX1P22670 PWAR6-201ENST00000552334 4618 ntBASIC3.86□□□□□ -1.79
RFX1P22670 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
RFX1P22670 MFSD8-236ENST00000641509 4050 ntBASIC3.86□□□□□ -1.79
RFX1P22670 RNU1-23P-201ENST00000363361 144 ntBASIC3.86□□□□□ -1.79
RFX1P22670 RNU6-407P-201ENST00000365280 104 ntBASIC3.86□□□□□ -1.79
RFX1P22670 RNU6-239P-201ENST00000390990 99 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms