Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.43□□□□□ -2.02
HOXC6P09630 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.43□□□□□ -2.02
HOXC6P09630 AC012433.1-201ENST00000588916 398 ntBASIC2.43□□□□□ -2.02
HOXC6P09630 AC010900.2-201ENST00000604508 210 ntBASIC2.43□□□□□ -2.02
HOXC6P09630 Y_RNA.772-201ENST00000606692 102 ntBASIC2.43□□□□□ -2.02
HOXC6P09630 AL357075.2-201ENST00000614906 189 ntBASIC2.43□□□□□ -2.02
HOXC6P09630 AC137590.2-201ENST00000619709 240 ntBASIC2.43□□□□□ -2.02
HOXC6P09630 AC078938.1-201ENST00000620993 318 ntBASIC2.43□□□□□ -2.02
HOXC6P09630 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
HOXC6P09630 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HOXC6P09630 LINC02555-201ENST00000563933 1951 ntBASIC2.42□□□□□ -2.02
HOXC6P09630 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
HOXC6P09630 RNU6-961P-201ENST00000363893 105 ntBASIC2.42□□□□□ -2.02
HOXC6P09630 RNU6-1145P-201ENST00000384246 107 ntBASIC2.42□□□□□ -2.02
HOXC6P09630 MIR208B-201ENST00000401172 77 ntBASIC2.42□□□□□ -2.02
HOXC6P09630 CBX3P9-201ENST00000402326 552 ntBASIC2.42□□□□□ -2.02
HOXC6P09630 RNU6-1203P-201ENST00000410703 110 ntBASIC2.42□□□□□ -2.02
HOXC6P09630 AIMP1P2-201ENST00000425294 312 ntBASIC2.42□□□□□ -2.02
HOXC6P09630 AL441985.1-201ENST00000457727 251 ntBASIC2.42□□□□□ -2.02
HOXC6P09630 RPL36AP48-201ENST00000485521 314 ntBASIC2.42□□□□□ -2.02
HOXC6P09630 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.42□□□□□ -2.02
HOXC6P09630 Y_RNA.713-201ENST00000517013 96 ntBASIC2.42□□□□□ -2.02
HOXC6P09630 DEFB108E-201ENST00000524692 240 ntBASIC2.42□□□□□ -2.02
HOXC6P09630 MZT1P2-201ENST00000604387 248 ntBASIC2.42□□□□□ -2.02
HOXC6P09630 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXC6P09630 AP001282.2-201ENST00000616149 309 ntBASIC2.42□□□□□ -2.02
HOXC6P09630 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
HOXC6P09630 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HOXC6P09630 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HOXC6P09630 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HOXC6P09630 RNU4-15P-201ENST00000362613 141 ntBASIC2.41□□□□□ -2.02
HOXC6P09630 RNU6-1010P-201ENST00000362757 107 ntBASIC2.41□□□□□ -2.02
HOXC6P09630 Y_RNA.60-201ENST00000362831 98 ntBASIC2.41□□□□□ -2.02
HOXC6P09630 SNORD113-8-201ENST00000363497 74 ntBASIC2.41□□□□□ -2.02
HOXC6P09630 Y_RNA.237-201ENST00000364439 102 ntBASIC2.41□□□□□ -2.02
HOXC6P09630 Y_RNA.350-201ENST00000365409 98 ntBASIC2.41□□□□□ -2.02
HOXC6P09630 RNU6-102P-201ENST00000384485 104 ntBASIC2.41□□□□□ -2.02
HOXC6P09630 MIR186-201ENST00000384988 86 ntBASIC2.41□□□□□ -2.02
HOXC6P09630 MT-TR-201ENST00000387439 65 ntBASIC2.41□□□□□ -2.02
HOXC6P09630 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.41□□□□□ -2.02
HOXC6P09630 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.41□□□□□ -2.02
HOXC6P09630 MRPS36P2-201ENST00000512569 299 ntBASIC2.41□□□□□ -2.02
HOXC6P09630 SNORA25.14-201ENST00000516481 132 ntBASIC2.41□□□□□ -2.02
HOXC6P09630 RNU6-794P-201ENST00000517261 64 ntBASIC2.41□□□□□ -2.02
HOXC6P09630 AC115990.1-201ENST00000526957 301 ntBASIC2.41□□□□□ -2.02
HOXC6P09630 RRN3P3-201ENST00000549207 578 ntBASIC2.41□□□□□ -2.02
HOXC6P09630 CYP4A27P-201ENST00000567218 190 ntBASIC2.41□□□□□ -2.02
HOXC6P09630 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.41□□□□□ -2.02
HOXC6P09630 MIR3668-201ENST00000582138 75 ntBASIC2.41□□□□□ -2.02
HOXC6P09630 AL034555.1-201ENST00000604816 211 ntBASIC2.41□□□□□ -2.02
HOXC6P09630 AL138963.2-201ENST00000605137 226 ntBASIC2.41□□□□□ -2.02
HOXC6P09630 RNU6-91P-201ENST00000607774 107 ntBASIC2.41□□□□□ -2.02
HOXC6P09630 AL137847.3-201ENST00000611521 109 ntBASIC2.41□□□□□ -2.02
HOXC6P09630 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.41□□□□□ -2.02
HOXC6P09630 SDR42E1P4-201ENST00000620894 481 ntBASIC2.41□□□□□ -2.02
HOXC6P09630 FO624990.1-201ENST00000636373 85 ntBASIC2.41□□□□□ -2.02
HOXC6P09630 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.41□□□□□ -2.02
HOXC6P09630 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
HOXC6P09630 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.4□□□□□ -2.02
HOXC6P09630 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.4□□□□□ -2.02
HOXC6P09630 AC135776.4-201ENST00000624300 1904 ntBASIC2.4□□□□□ -2.02
HOXC6P09630 snoU2_19.1-201ENST00000362361 80 ntBASIC2.4□□□□□ -2.03
HOXC6P09630 RNU6-626P-201ENST00000363354 107 ntBASIC2.4□□□□□ -2.03
HOXC6P09630 RNU1-138P-201ENST00000384093 164 ntBASIC2.4□□□□□ -2.03
HOXC6P09630 Y_RNA.541-201ENST00000384640 113 ntBASIC2.4□□□□□ -2.03
HOXC6P09630 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.4□□□□□ -2.03
HOXC6P09630 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HOXC6P09630 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.4□□□□□ -2.03
HOXC6P09630 RNU4-30P-201ENST00000410245 143 ntBASIC2.4□□□□□ -2.03
HOXC6P09630 CYCSP48-201ENST00000417124 323 ntBASIC2.4□□□□□ -2.03
HOXC6P09630 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.4□□□□□ -2.03
HOXC6P09630 RPL26P26-201ENST00000480251 434 ntBASIC2.4□□□□□ -2.03
HOXC6P09630 HMGB3P17-201ENST00000504195 649 ntBASIC2.4□□□□□ -2.03
HOXC6P09630 RNA5SP182-201ENST00000516064 82 ntBASIC2.4□□□□□ -2.03
HOXC6P09630 SCARNA17.1-201ENST00000516211 143 ntBASIC2.4□□□□□ -2.03
HOXC6P09630 SCARNA17.2-201ENST00000516334 143 ntBASIC2.4□□□□□ -2.03
HOXC6P09630 RN7SKP49-201ENST00000516675 260 ntBASIC2.4□□□□□ -2.03
HOXC6P09630 SCARNA24.2-201ENST00000516968 130 ntBASIC2.4□□□□□ -2.03
HOXC6P09630 MIR3923-201ENST00000579521 83 ntBASIC2.4□□□□□ -2.03
HOXC6P09630 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXC6P09630 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.4□□□□□ -2.03
HOXC6P09630 MIR6845-201ENST00000613182 61 ntBASIC2.4□□□□□ -2.03
HOXC6P09630 SCARNA17.4-201ENST00000614296 143 ntBASIC2.4□□□□□ -2.03
HOXC6P09630 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.4□□□□□ -2.03
HOXC6P09630 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.03
HOXC6P09630 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HOXC6P09630 AL109809.4-201ENST00000603520 2185 ntBASIC2.39□□□□□ -2.03
HOXC6P09630 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.39□□□□□ -2.03
HOXC6P09630 RNA5SP393-201ENST00000363423 117 ntBASIC2.39□□□□□ -2.03
HOXC6P09630 RNU6-727P-201ENST00000363592 107 ntBASIC2.39□□□□□ -2.03
HOXC6P09630 SNORD115-8-201ENST00000363856 82 ntBASIC2.39□□□□□ -2.03
HOXC6P09630 Y_RNA.286-201ENST00000364813 102 ntBASIC2.39□□□□□ -2.03
HOXC6P09630 SNORD115-38-201ENST00000365037 82 ntBASIC2.39□□□□□ -2.03
HOXC6P09630 RNU6-20P-201ENST00000384106 107 ntBASIC2.39□□□□□ -2.03
HOXC6P09630 AC019129.1-201ENST00000403786 261 ntBASIC2.39□□□□□ -2.03
HOXC6P09630 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.39□□□□□ -2.03
HOXC6P09630 CYCSP49-201ENST00000420810 319 ntBASIC2.39□□□□□ -2.03
HOXC6P09630 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.39□□□□□ -2.03
HOXC6P09630 MTND4LP30-201ENST00000454092 297 ntBASIC2.39□□□□□ -2.03
HOXC6P09630 RPL39P38-201ENST00000467018 153 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms