Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 AL513477.1-202ENST00000417061 214 ntBASIC3.55□□□□□ -1.84
PRPF40AO75400 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.55□□□□□ -1.84
PRPF40AO75400 AC016717.1-201ENST00000448918 286 ntBASIC3.55□□□□□ -1.84
PRPF40AO75400 AC016925.1-201ENST00000458303 298 ntBASIC3.55□□□□□ -1.84
PRPF40AO75400 RN7SL633P-201ENST00000488974 297 ntBASIC3.55□□□□□ -1.84
PRPF40AO75400 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.55□□□□□ -1.84
PRPF40AO75400 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.55□□□□□ -1.84
PRPF40AO75400 RNA5SP385-201ENST00000515947 110 ntBASIC3.55□□□□□ -1.84
PRPF40AO75400 RNU6-948P-201ENST00000516374 107 ntBASIC3.55□□□□□ -1.84
PRPF40AO75400 SNORA48.11-201ENST00000517015 89 ntBASIC3.55□□□□□ -1.84
PRPF40AO75400 MIR3200-201ENST00000580767 85 ntBASIC3.55□□□□□ -1.84
PRPF40AO75400 AC072026.1-201ENST00000605023 201 ntBASIC3.55□□□□□ -1.84
PRPF40AO75400 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.55□□□□□ -1.84
PRPF40AO75400 MIR7112-201ENST00000616126 65 ntBASIC3.55□□□□□ -1.84
PRPF40AO75400 MIR1248-201ENST00000629190 106 ntBASIC3.55□□□□□ -1.84
PRPF40AO75400 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
PRPF40AO75400 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
PRPF40AO75400 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PRPF40AO75400 FAM35CP-201ENST00000554755 2470 ntBASIC3.54□□□□□ -1.84
PRPF40AO75400 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
PRPF40AO75400 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRPF40AO75400 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PRPF40AO75400 RNU6-47P-201ENST00000383866 107 ntBASIC3.54□□□□□ -1.84
PRPF40AO75400 RNU6-886P-201ENST00000384319 105 ntBASIC3.54□□□□□ -1.84
PRPF40AO75400 MIR483-201ENST00000385070 76 ntBASIC3.54□□□□□ -1.84
PRPF40AO75400 MIR95-201ENST00000385072 81 ntBASIC3.54□□□□□ -1.84
PRPF40AO75400 COX6CP10-201ENST00000416832 224 ntBASIC3.54□□□□□ -1.84
PRPF40AO75400 AL353705.1-201ENST00000433468 480 ntBASIC3.54□□□□□ -1.84
PRPF40AO75400 HMGN2P18-201ENST00000450680 270 ntBASIC3.54□□□□□ -1.84
PRPF40AO75400 RN7SKP57-201ENST00000517248 293 ntBASIC3.54□□□□□ -1.84
PRPF40AO75400 AC136628.3-201ENST00000521868 290 ntBASIC3.54□□□□□ -1.84
PRPF40AO75400 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.54□□□□□ -1.84
PRPF40AO75400 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.54□□□□□ -1.84
PRPF40AO75400 MIR3616-201ENST00000584070 92 ntBASIC3.54□□□□□ -1.84
PRPF40AO75400 AL356280.1-201ENST00000603614 379 ntBASIC3.54□□□□□ -1.84
PRPF40AO75400 AL365265.1-201ENST00000621045 234 ntBASIC3.54□□□□□ -1.84
PRPF40AO75400 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PRPF40AO75400 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRPF40AO75400 RNU1-23P-201ENST00000363361 144 ntBASIC3.53□□□□□ -1.84
PRPF40AO75400 RNU6-461P-201ENST00000364195 107 ntBASIC3.53□□□□□ -1.84
PRPF40AO75400 RNU6-763P-201ENST00000390865 106 ntBASIC3.53□□□□□ -1.84
PRPF40AO75400 RNU6-220P-201ENST00000390919 107 ntBASIC3.53□□□□□ -1.84
PRPF40AO75400 RNU6-493P-201ENST00000391321 108 ntBASIC3.53□□□□□ -1.84
PRPF40AO75400 RNU6-221P-201ENST00000459541 99 ntBASIC3.53□□□□□ -1.84
PRPF40AO75400 RNY3P16-201ENST00000516338 101 ntBASIC3.53□□□□□ -1.84
PRPF40AO75400 SNORA74D-201ENST00000516404 141 ntBASIC3.53□□□□□ -1.84
PRPF40AO75400 RN7SKP40-201ENST00000517211 242 ntBASIC3.53□□□□□ -1.84
PRPF40AO75400 AC087441.2-201ENST00000529141 262 ntBASIC3.53□□□□□ -1.84
PRPF40AO75400 AC013412.1-201ENST00000610687 192 ntBASIC3.53□□□□□ -1.84
PRPF40AO75400 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.53□□□□□ -1.84
PRPF40AO75400 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRPF40AO75400 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
PRPF40AO75400 AC093010.3-201ENST00000570269 15214 ntBASIC3.53□□□□□ -1.84
PRPF40AO75400 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.52□□□□□ -1.85
PRPF40AO75400 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
PRPF40AO75400 Y_RNA.287-201ENST00000364853 94 ntBASIC3.52□□□□□ -1.85
PRPF40AO75400 Y_RNA.341-201ENST00000365341 102 ntBASIC3.52□□□□□ -1.85
PRPF40AO75400 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.52□□□□□ -1.85
PRPF40AO75400 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.52□□□□□ -1.85
PRPF40AO75400 RPS29P6-201ENST00000438196 145 ntBASIC3.52□□□□□ -1.85
PRPF40AO75400 AC006028.1-201ENST00000438379 402 ntBASIC3.52□□□□□ -1.85
PRPF40AO75400 SUMO1P3-201ENST00000439961 304 ntBASIC3.52□□□□□ -1.85
PRPF40AO75400 AC109925.1-201ENST00000478069 331 ntBASIC3.52□□□□□ -1.85
PRPF40AO75400 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.52□□□□□ -1.85
PRPF40AO75400 MIR5680-201ENST00000577577 84 ntBASIC3.52□□□□□ -1.85
PRPF40AO75400 AL078604.3-201ENST00000615580 211 ntBASIC3.52□□□□□ -1.85
PRPF40AO75400 AC007318.2-201ENST00000620999 243 ntBASIC3.52□□□□□ -1.85
PRPF40AO75400 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
PRPF40AO75400 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PRPF40AO75400 AC009487.4-201ENST00000624969 3585 ntBASIC3.51□□□□□ -1.85
PRPF40AO75400 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
PRPF40AO75400 RNU6-271P-201ENST00000363858 105 ntBASIC3.51□□□□□ -1.85
PRPF40AO75400 Y_RNA.361-201ENST00000365515 120 ntBASIC3.51□□□□□ -1.85
PRPF40AO75400 RNU6-418P-201ENST00000384035 107 ntBASIC3.51□□□□□ -1.85
PRPF40AO75400 RNU6-1235P-201ENST00000384559 107 ntBASIC3.51□□□□□ -1.85
PRPF40AO75400 MIR873-201ENST00000401120 77 ntBASIC3.51□□□□□ -1.85
PRPF40AO75400 RNU4-47P-201ENST00000410876 114 ntBASIC3.51□□□□□ -1.85
PRPF40AO75400 OOSP1P1-201ENST00000423265 274 ntBASIC3.51□□□□□ -1.85
PRPF40AO75400 Y_RNA.637-201ENST00000459424 114 ntBASIC3.51□□□□□ -1.85
PRPF40AO75400 RNU6-498P-201ENST00000459468 107 ntBASIC3.51□□□□□ -1.85
PRPF40AO75400 RNU6-861P-201ENST00000516745 106 ntBASIC3.51□□□□□ -1.85
PRPF40AO75400 RN7SKP282-201ENST00000516824 299 ntBASIC3.51□□□□□ -1.85
PRPF40AO75400 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.51□□□□□ -1.85
PRPF40AO75400 AC022559.1-201ENST00000520905 205 ntBASIC3.51□□□□□ -1.85
PRPF40AO75400 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PRPF40AO75400 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.51□□□□□ -1.85
PRPF40AO75400 MIR3117-201ENST00000584034 78 ntBASIC3.51□□□□□ -1.85
PRPF40AO75400 AC025754.2-201ENST00000606491 432 ntBASIC3.51□□□□□ -1.85
PRPF40AO75400 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.51□□□□□ -1.85
PRPF40AO75400 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PRPF40AO75400 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PRPF40AO75400 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.5□□□□□ -1.85
PRPF40AO75400 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
PRPF40AO75400 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.5□□□□□ -1.85
PRPF40AO75400 RNU6-801P-201ENST00000364087 105 ntBASIC3.5□□□□□ -1.85
PRPF40AO75400 Y_RNA.368-201ENST00000365547 113 ntBASIC3.5□□□□□ -1.85
PRPF40AO75400 SNORA20B-201ENST00000384220 132 ntBASIC3.5□□□□□ -1.85
PRPF40AO75400 Y_RNA.456-201ENST00000384232 111 ntBASIC3.5□□□□□ -1.85
PRPF40AO75400 MIR561-201ENST00000385216 97 ntBASIC3.5□□□□□ -1.85
PRPF40AO75400 SNORD67-201ENST00000390833 111 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 201.8 ms