Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RN7SKP18-201ENST00000516005 275 ntBASIC4.04□□□□□ -1.76
GFRA3O60609 RNU6-1282P-201ENST00000516735 96 ntBASIC4.04□□□□□ -1.76
GFRA3O60609 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.04□□□□□ -1.76
GFRA3O60609 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.04□□□□□ -1.76
GFRA3O60609 MIR8058-201ENST00000615737 89 ntBASIC4.04□□□□□ -1.76
GFRA3O60609 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
GFRA3O60609 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
GFRA3O60609 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.04□□□□□ -1.76
GFRA3O60609 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.04□□□□□ -1.76
GFRA3O60609 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.03□□□□□ -1.76
GFRA3O60609 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
GFRA3O60609 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
GFRA3O60609 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
GFRA3O60609 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
GFRA3O60609 AC007496.3-201ENST00000624987 3443 ntBASIC4.03□□□□□ -1.76
GFRA3O60609 SNORD115-39-201ENST00000363694 82 ntBASIC4.03□□□□□ -1.76
GFRA3O60609 SNORA1.1-201ENST00000364671 133 ntBASIC4.03□□□□□ -1.76
GFRA3O60609 RNU6-146P-201ENST00000384602 108 ntBASIC4.03□□□□□ -1.76
GFRA3O60609 RNU6-540P-201ENST00000384622 101 ntBASIC4.03□□□□□ -1.76
GFRA3O60609 MIR1283-1-201ENST00000408494 87 ntBASIC4.03□□□□□ -1.76
GFRA3O60609 RNU6-57P-201ENST00000411348 103 ntBASIC4.03□□□□□ -1.76
GFRA3O60609 RPS29P19-201ENST00000479709 171 ntBASIC4.03□□□□□ -1.76
GFRA3O60609 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.03□□□□□ -1.76
GFRA3O60609 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.03□□□□□ -1.76
GFRA3O60609 MIR4778-201ENST00000577635 80 ntBASIC4.03□□□□□ -1.76
GFRA3O60609 MIR8069-1-201ENST00000616627 86 ntBASIC4.03□□□□□ -1.76
GFRA3O60609 SEPT14P17-201ENST00000617978 177 ntBASIC4.03□□□□□ -1.76
GFRA3O60609 MIR8069-2-201ENST00000621412 86 ntBASIC4.03□□□□□ -1.76
GFRA3O60609 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
GFRA3O60609 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
GFRA3O60609 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
GFRA3O60609 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.02□□□□□ -1.77
GFRA3O60609 CEP170P1-201ENST00000502249 4587 ntBASIC4.02□□□□□ -1.77
GFRA3O60609 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC4.02□□□□□ -1.77
GFRA3O60609 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
GFRA3O60609 MIRLET7A1-201ENST00000362295 80 ntBASIC4.02□□□□□ -1.77
GFRA3O60609 SNORA38.1-201ENST00000364172 131 ntBASIC4.02□□□□□ -1.77
GFRA3O60609 RNU6-975P-201ENST00000384296 105 ntBASIC4.02□□□□□ -1.77
GFRA3O60609 AL133475.1-201ENST00000404414 305 ntBASIC4.02□□□□□ -1.77
GFRA3O60609 MIR548O-201ENST00000408583 114 ntBASIC4.02□□□□□ -1.77
GFRA3O60609 SNORA3.3-201ENST00000408712 125 ntBASIC4.02□□□□□ -1.77
GFRA3O60609 AL139247.1-201ENST00000422768 325 ntBASIC4.02□□□□□ -1.77
GFRA3O60609 AC069257.2-201ENST00000441819 155 ntBASIC4.02□□□□□ -1.77
GFRA3O60609 AC016717.1-201ENST00000448918 286 ntBASIC4.02□□□□□ -1.77
GFRA3O60609 AL161713.1-201ENST00000555538 145 ntBASIC4.02□□□□□ -1.77
GFRA3O60609 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.02□□□□□ -1.77
GFRA3O60609 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC4.02□□□□□ -1.77
GFRA3O60609 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
GFRA3O60609 MIR8057-201ENST00000620957 69 ntBASIC4.02□□□□□ -1.77
GFRA3O60609 AC074140.1-201ENST00000621617 208 ntBASIC4.02□□□□□ -1.77
GFRA3O60609 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC4.02□□□□□ -1.77
GFRA3O60609 U6.111-201ENST00000636093 83 ntBASIC4.02□□□□□ -1.77
GFRA3O60609 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
GFRA3O60609 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
GFRA3O60609 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
GFRA3O60609 ZNF271P-202ENST00000465539 1970 ntBASIC4.02□□□□□ -1.77
GFRA3O60609 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.02□□□□□ -1.77
GFRA3O60609 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.01□□□□□ -1.77
GFRA3O60609 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
GFRA3O60609 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
GFRA3O60609 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
GFRA3O60609 AC010680.1-201ENST00000590024 3590 ntBASIC4.01□□□□□ -1.77
GFRA3O60609 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.01□□□□□ -1.77
GFRA3O60609 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
GFRA3O60609 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
GFRA3O60609 SNORD115-28-201ENST00000363931 81 ntBASIC4.01□□□□□ -1.77
GFRA3O60609 Y_RNA.299-201ENST00000364973 94 ntBASIC4.01□□□□□ -1.77
GFRA3O60609 SNORA1.3-201ENST00000384676 136 ntBASIC4.01□□□□□ -1.77
GFRA3O60609 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.01□□□□□ -1.77
GFRA3O60609 MIR1270-201ENST00000459320 83 ntBASIC4.01□□□□□ -1.77
GFRA3O60609 SCGB1D5P-201ENST00000515134 247 ntBASIC4.01□□□□□ -1.77
GFRA3O60609 RN7SKP46-201ENST00000515942 234 ntBASIC4.01□□□□□ -1.77
GFRA3O60609 SNORA31.4-201ENST00000516049 129 ntBASIC4.01□□□□□ -1.77
GFRA3O60609 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.01□□□□□ -1.77
GFRA3O60609 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.01□□□□□ -1.77
GFRA3O60609 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.01□□□□□ -1.77
GFRA3O60609 CYCSP40-201ENST00000575927 294 ntBASIC4.01□□□□□ -1.77
GFRA3O60609 AC233702.9-201ENST00000581528 203 ntBASIC4.01□□□□□ -1.77
GFRA3O60609 AL359075.3-201ENST00000613288 217 ntBASIC4.01□□□□□ -1.77
GFRA3O60609 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.01□□□□□ -1.77
GFRA3O60609 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
GFRA3O60609 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
GFRA3O60609 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
GFRA3O60609 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
GFRA3O60609 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.01□□□□□ -1.77
GFRA3O60609 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
GFRA3O60609 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.01□□□□□ -1.77
GFRA3O60609 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
GFRA3O60609 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4□□□□□ -1.77
GFRA3O60609 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4□□□□□ -1.77
GFRA3O60609 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4□□□□□ -1.77
GFRA3O60609 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
GFRA3O60609 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4□□□□□ -1.77
GFRA3O60609 SNORA60-201ENST00000362396 134 ntBASIC4□□□□□ -1.77
GFRA3O60609 RNU6-1010P-201ENST00000362757 107 ntBASIC4□□□□□ -1.77
GFRA3O60609 Y_RNA.140-201ENST00000363474 103 ntBASIC4□□□□□ -1.77
GFRA3O60609 RNA5SP50-201ENST00000363731 107 ntBASIC4□□□□□ -1.77
GFRA3O60609 RNA5SP126-201ENST00000365092 109 ntBASIC4□□□□□ -1.77
GFRA3O60609 RN7SKP200-201ENST00000410564 320 ntBASIC4□□□□□ -1.77
GFRA3O60609 AC016909.1-201ENST00000415916 166 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms